scholarly journals Magnesium–halobenzene bonding: mapping the halogen sigma-hole with a Lewis-acidic complex

2021 ◽  
Author(s):  
Alexander Friedrich ◽  
Jürgen Pahl ◽  
Jonathan Eyselein ◽  
Jens Langer ◽  
Nico van Eikema Hommes ◽  
...  
Keyword(s):  

Complexes of a highly Lewis acidic Mg cation and the full series of Ph–X (X = F, Cl, Br, I) have been structurally characterized. The Mg⋯X–Ph angle decreases with halogen size on account of the growing halogen σ-hole.

2020 ◽  
Vol 22 (20) ◽  
pp. 11558-11566 ◽  
Author(s):  
Jyoti Rani ◽  
Vratta Grover ◽  
Swati Dhamija ◽  
Hatem M. Titi ◽  
Ranjan Patra

A direct influence of porphyrin's ring current on the sigma-hole potential of halogen atoms at the axial position of metalloporphyrins during halogen bonded self-assembly is determined in this study.


2016 ◽  
Vol 22 (43) ◽  
pp. 15404-15412 ◽  
Author(s):  
Pu Guo ◽  
Ananya Paul ◽  
Arvind Kumar ◽  
Abdelbasset A. Farahat ◽  
Dhiraj Kumar ◽  
...  

2018 ◽  
Vol 9 (35) ◽  
pp. 7027-7042 ◽  
Author(s):  
Karuthapandi Selvakumar ◽  
Harkesh B. Singh

The existence of intramolecular chalcogen bonds (IChBs) in 2,6-disubstituted arylchalcogen derivatives is determined by the substituents and the sigma hole donor behavior of the chalcogen atom in the molecule.


Molecules ◽  
2020 ◽  
Vol 25 (3) ◽  
pp. 530
Author(s):  
Juan Zurita ◽  
Vladimir Rodriguez ◽  
Cesar Zambrano ◽  
Jose Ramón Mora ◽  
Luis Rincón ◽  
...  

In the present work, a number of R–X⋯NH3 (X = Cl, Br, and I) halogen bonded systems were theoretical studied by means of DFT calculations performed at the ωB97XD/6-31+G(d,p) level of theory in order to get insights on the effect of the electron-donating or electron-withdrawing character of the different R substituent groups (R = halogen, methyl, partially fluorinated methyl, perfluoro-methyl, ethyl, vinyl, and acetyl) on the stability of the halogen bond. The results indicate that the relative stability of the halogen bond follows the Cl < Br < I trend considering the same R substituent whereas the more electron-withdrawing character of the R substituent the more stable the halogen bond. Refinement of the latter results, performed at the MP2/6-31+G(d,p) level showed that the DFT and the MP2 binding energies correlate remarkably well, suggesting that the Grimme’s type dispersion-corrected functional produces reasonable structural and energetic features of halogen bond systems. DFT results were also observed to agree with more refined calculations performed at the CCSD(T) level. In a further stage, a more thorough analysis of the R–Br⋯NH3 complexes was performed by means of a novel electron localization/delocalization tool, defined in terms of an Information Theory, IT, based quantity obtained from the conditional pair density. For the latter, our in-house developed C++/CUDA program, called KLD (acronym of Kullback–Leibler divergence), was employed. KLD results mapped onto the one-electron density plotted at a 0.04 a.u. isovalue, showed that (i) as expected, the localized electron depletion of the Br sigma-hole is largely affected by the electron-withdrawing character of the R substituent group and (ii) the R–X bond is significantly polarized due to the presence of the NH3 molecule in the complexes. The afore-mentioned constitutes a clear indication of the dominant character of electrostatics on the stabilization of halogen bonds in agreement with a number of studies reported in the main literature. Finally, the cooperative effects on the [Br—CN]n system (n = 1–8) was evaluated at the MP2/6-31+G(d,p) level, where it was observed that an increase of about ~14.2% on the complex stability is obtained when going from n = 2 to n = 8. The latter results were corroborated by the analysis of the changes on the Fermi-hole localization pattern on the halogen bond zones, which suggests an also important contribution of the electron correlation in the stabilization of these systems.


Science ◽  
2017 ◽  
Vol 358 (6364) ◽  
pp. 761-764 ◽  
Author(s):  
Steven M. Banik ◽  
Anna Levina ◽  
Alan M. Hyde ◽  
Eric N. Jacobsen

Small-molecule dual hydrogen-bond (H-bond) donors such as ureas, thioureas, squaramides, and guanidinium ions enjoy widespread use as effective catalysts for promoting a variety of enantioselective reactions. However, these catalysts are only weakly acidic and therefore require highly reactive electrophilic substrates to be effective. We introduce here a mode of catalytic activity with chiral H-bond donors that enables enantioselective reactions of relatively unreactive electrophiles. Squaramides are shown to interact with silyl triflates by binding the triflate counterion to form a stable, yet highly Lewis acidic, complex. The silyl triflate-chiral squaramide combination promotes the generation of oxocarbenium intermediates from acetal substrates at low temperatures. Enantioselectivity in nucleophile additions to the cationic intermediates is then controlled through a network of noncovalent interactions between the squaramide catalyst and the oxocarbenium triflate.


2013 ◽  
Vol 34 (13) ◽  
pp. 1125-1135 ◽  
Author(s):  
Krystel El Hage ◽  
Jean-Philip Piquemal ◽  
Zeina Hobaika ◽  
Richard G. Maroun ◽  
Nohad Gresh

2017 ◽  
Vol 203 ◽  
pp. 131-163 ◽  
Author(s):  
Christer B. Aakeröy ◽  
Saman Alavi ◽  
Lee Brammer ◽  
David L. Bryce ◽  
Timothy Clark ◽  
...  

2012 ◽  
Vol 185 (1) ◽  
pp. 224-229 ◽  
Author(s):  
Toru Murayama ◽  
Nozomi Kuramata ◽  
Shunsuke Takatama ◽  
Kosuke Nakatani ◽  
Shoko Izumi ◽  
...  

2020 ◽  
Vol 22 (12) ◽  
pp. 6595-6605
Author(s):  
Niloufar Hendinejad ◽  
Qadir K. Timerghazin

S-Nitrosothiols, ubiquitous biological derivatives of nitric oxide, can engage in σ-hole/bonding with Lewis bases, which, in combination with hydrogen bonding with Lewis acids, could be the basis of enzymatic control of S-nitrosothiol reactions.


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