scholarly journals A soluble NADH dehydrogenase (NADH: ferricyanide oxidoreductase) from Thermus aquaticus strain T351

1983 ◽  
Vol 209 (2) ◽  
pp. 427-433 ◽  
Author(s):  
K A J Walsh ◽  
R M Daniel ◽  
H W Morgan

A soluble NADH dehydrogenase (NADH:ferricyanide oxidoreductase) has been obtained by simple disruption of cells of Thermus aquaticus strain T351, and purified. The enzyme is of low molecular mass, 50 000 Da, and displays many of the properties of the membrane-bound enzyme, including inhibition by both NADH and ferricyanide, and the same Km for ferricyanide. The enzyme contains 0.05 mol of FMN, 0.16 mol of labile sulphur and 2.2 mol of iron per mol of protein. The enzyme is inhibited by NAD and cupferron competitively with ferricyanide, and by ATP (but not ADP) competitively with NADH. The enzyme is particularly thermostable, having a half-life at 95 degrees C of 35 min. The effect of temperature on the molar absorption coefficient and the stability of NADH was determined.

2006 ◽  
Vol 52 (2) ◽  
pp. 157-168 ◽  
Author(s):  
Subhas Das ◽  
Dileep Kumar Singh

A microbial biodegradation of monocrotophos was studied in the present investigation. The monocrotophos-degrading enzyme was purified and characterized from two soil bacterial strains. The cells were disrupted and the membrane-bound fractions were studied for purification and characterization. Solubilization of the membrane-bound fractions released nearly 80% of the bound protein. Phase separation further enriched the enzyme fraction 34–41 times. The enzyme phosphotriesterase (PTE) from both the strains was purified to more than 1000-fold with 13%–16% yield. Purified PTE from Clavibacter michiganense subsp. insidiosum SBL11 is a monomeric enzyme with a molecular mass of 43.5 kDa (pI of 7.5), while PTE from Pseudomonas aeruginosa F10B is a heterodimeric enzyme with a molecular mass of 43 and 41 kDa (pI of 7.9 and 7.35). Both purified enzymes are stable enzymes with peak activity at pH 9.0. The enzyme from strain F10B was more thermostable (half-life = 7.3 h) than that from SBL11 (half-life = 6.4 h at 50 °C), while both showed the same temperature optimum of 37 °C. Inhibitors like dithiothreitol and EDTA inhibited the purified enzyme, while p-chloromercuribenzoic acid and indoleacetic acid had a very little effect.Key words: biodegradation, monocrotophos, phosphotriesterase, Pseudomonas aeruginosa F10B, Clavibacter michiganense subsp. insidiosum SBL11.


1982 ◽  
Vol 22 (06) ◽  
pp. 993-997
Author(s):  
R.C. Marriott ◽  
C.I. Kao ◽  
F.W. Kristal

Abstract Kinetic study of the desulfonation of Dowfax surfactants, disulfonated alkyl diphenyloxide, is carried out in the temperature range of from 177 to 272C, and a pH range of 2.0 to 7.0. The rate data support that the desulfonation is a step-wise reaction catalyzed by hydrogen ion. The desulfonation rate is first-order with respect to both surfactant and hydrogen ion concentrations. As a result, the pH of the reaction system has a very significant effect on the stability of the surfactants and may outweigh the effect of temperature. The half-life of disulfonated alkyl diphenyloxide at 235C in a 5.5-pH buffer solution is 1,035 days, and at 272C in a 7.0-pH buffer solution is 295 days. The results indicate that these surfactants can be used in most oil reservoir steamflood applications, especially when the rock formation may buffer the pH to about 7.0. Introduction These surfactants are a mixture of mono- and dialkylated, essentially disulfonated diphenyloxide. The materials are sold commercially either in acid form (pH less than 1.0) or mostly in neutralized form (pH >7) as surfactants for various applications. These surfactants commonly are used in harsh environments such as high temperature, high electrolyte concentration, and wide pH range. The stability of these surfactants has not been studied extensively. Handy et al. evaluated several surfactants for oil-reservoir application. Dowfax 2AO (the acid form) was one of the surfactants they studied. Their data, for 177C and a pH ranging from 3.3 to 3.9, indicate that the desulfonation follows first-order kinetic with a half-life of 5.63 days. Since the pH in most carbonate reservoirs will be buffered to approximately 7 pH, Handy et al. also studied the effect of pH using a petroleum sulfonate, Petronate TRS-10-80. Buffering the material to a pH of 7.04 only marginally improves the half-life from 7 to 10 days. Consequently, they concluded that none of the surfactants tested would perform adequately in the steamflood oil-reservoir applications. perform adequately in the steamflood oil-reservoir applications. It is generally believed that the desulfonation of aromatic sulfonates proceeds by an initial rapid protonation of the aromatic ring followed by a proceeds by an initial rapid protonation of the aromatic ring followed by a rate-limiting desulfonation step to release a mole of sulfuric acid. The reaction depends significantly on the hydrogen ion concentration. Since the desulfonation releases sulfuric acid and decreases the pH of the system, an autocatalytic phenomenon can be expected. The kinetics of the desulfonation of disulfonated alkyl diphenyloxide and the effect of temperature and a wide range of pH on the desulfonation rate are discussed in this paper. Experimental The analyses of the two forms of disulfonated alkyl diphenyloxide, the acid form and the sodium salt form, are shown in Table 1. Both of these forms contain C 12 branched hydrophobes. The desulfonation experiments were carried out in tantalum vessels approximately 9 cm3 in volume. The vessels were purged first with nitrogen for 5 minutes. The surfactants were diluted to the appropriate concentration and were adjusted to the desired pH. SPEJ p. 993


1977 ◽  
Vol 16 (04) ◽  
pp. 157-162 ◽  
Author(s):  
C. Schümichen ◽  
B. Mackenbrock ◽  
G. Hoffmann

SummaryThe bone-seeking 99mTc-Sn-pyrophosphate compound (compound A) was diluted both in vitro and in vivo and proved to be unstable both in vitro and in vivo. However, stability was much better in vivo than in vitro and thus the in vitro stability of compound A after dilution in various mediums could be followed up by a consecutive evaluation of the in vivo distribution in the rat. After dilution in neutral normal saline compound A is metastable and after a short half-life it is transformed into the other 99mTc-Sn-pyrophosphate compound A is metastable and after a short half-life in bone but in the kidneys. After dilution in normal saline of low pH and in buffering solutions the stability of compound A is increased. In human plasma compound A is relatively stable but not in plasma water. When compound B is formed in a buffering solution, uptake in the kidneys and excretion in urine is lowered and blood concentration increased.It is assumed that the association of protons to compound A will increase its stability at low concentrations while that to compound B will lead to a strong protein bond in plasma. It is concluded that compound A will not be stable in vivo because of a lack of stability in the extravascular space, and that the protein bond in plasma will be a measure of its in vivo stability.


1977 ◽  
Vol 37 (01) ◽  
pp. 073-080 ◽  
Author(s):  
Knut Gjesdal ◽  
Duncan S. Pepper

SummaryHuman platelet factor 4 (PF-4) showed a reaction of complete identity with PF-4 from Macaca mulatta when tested against rabbit anti-human-PF-4. Such immunoglobulin was used for quantitative precipitation of in vivo labelled PF-4 in monkey serum. The results suggest that the active protein had an intra-platelet half-life of about 21 hours. In vitro 125I-labelled human PF-4 was injected intravenously into two monkeys and isolated by immuno-precipita-tion from platelet-poor plasma and from platelets disrupted after gel-filtration. Plasma PF-4 was found to have a half-life of 7 to 11 hours. Some of the labelled PF-4 was associated with platelets and this fraction had a rapid initial disappearance rate and a subsequent half-life close to that of plasma PF-4. The results are compatible with the hypothesis that granular PF-4 belongs to a separate compartment, whereas membrane-bound PF-4 and plasma PF-4 may interchange.


2019 ◽  
Vol 26 (5) ◽  
pp. 339-347 ◽  
Author(s):  
Dilani G. Gamage ◽  
Ajith Gunaratne ◽  
Gopal R. Periyannan ◽  
Timothy G. Russell

Background: The dipeptide composition-based Instability Index (II) is one of the protein primary structure-dependent methods available for in vivo protein stability predictions. As per this method, proteins with II value below 40 are stable proteins. Intracellular protein stability principles guided the original development of the II method. However, the use of the II method for in vitro protein stability predictions raises questions about the validity of applying the II method under experimental conditions that are different from the in vivo setting. Objective: The aim of this study is to experimentally test the validity of the use of II as an in vitro protein stability predictor. Methods: A representative protein CCM (CCM - Caulobacter crescentus metalloprotein) that rapidly degrades under in vitro conditions was used to probe the dipeptide sequence-dependent degradation properties of CCM by generating CCM mutants to represent stable and unstable II values. A comparative degradation analysis was carried out under in vitro conditions using wildtype CCM, CCM mutants and two other candidate proteins: metallo-β-lactamase L1 and α -S1- casein representing stable, borderline stable/unstable, and unstable proteins as per the II predictions. The effect of temperature and a protein stabilizing agent on CCM degradation was also tested. Results: Data support the dipeptide composition-dependent protein stability/instability in wt-CCM and mutants as predicted by the II method under in vitro conditions. However, the II failed to accurately represent the stability of other tested proteins. Data indicate the influence of protein environmental factors on the autoproteolysis of proteins. Conclusion: Broader application of the II method for the prediction of protein stability under in vitro conditions is questionable as the stability of the protein may be dependent not only on the intrinsic nature of the protein but also on the conditions of the protein milieu.


1994 ◽  
Vol 358 ◽  
Author(s):  
G. Gumbs

ABSTRACTA self-consistent many-body theory is developed to study the effect of temperature and electron density on the interband absorption coefficient and the frequency-dependent refractive index for an array of isolated quantum wires. The peaks in the absorption coefficient correspond to interband transitions resulting in the resonant absorption of light. The oscillations in the derivative spectrum are due to the quantization of the energy levels related to the in-plane confining potential for such reduced dimensional systems. There are appreciable changes in the absorption spectrum when the electron density or temperature is increased. One interband transition peak is suppressed in the high electron density limit and the thermal depopulation effect on the electron subbands can be easily seen when the temperature is high. We also find that the exciton coupling weakens the shoulder features in the absorption spectrum. This study is relevant to optical characterization of the confining potential and the areal density of electrons using photoreflectance. By using incident light with tunable frequencies in the interband excitation regime, contactless photoreflectance measurements may be carried out and the data compared with our calculations. By fitting the numerical results to the peak positions of the photoreflectance spectrum, the number of electrons in each wire may be extracted.


Genetics ◽  
2003 ◽  
Vol 163 (1) ◽  
pp. 91-101 ◽  
Author(s):  
Erin N Asleson ◽  
Dennis M Livingston

Abstract We investigated the stability of the Saccharomyces cerevisiae Rad52 protein to learn how a cell controls its quantity and longevity. We measured the cellular levels of wild-type and mutant forms of Rad52p when expressed from the RAD52 promoter and the half-lives of the various forms of Rad52p when expressed from the GAL1 promoter. The wild-type protein has a half-life of 15 min. rad52 mutations variably affect the cellular levels of the protein products, and these levels correlate with the measured half-lives. While missense mutations in the N terminus of the protein drastically reduce the cellular levels of the mutant proteins, two mutations—one a deletion of amino acids 210-327 and the other a missense mutation of residue 235—increase the cellular level and half-life more than twofold. These results suggest that Rad52p is subject to post-translational regulation. Proteasomal mutations have no effect on Rad52p half-life but increase the amount of RAD52 message. In contrast to Rad52p, the half-life of Rad51p is >2 hr, and RAD51 expression is unaffected by proteasomal mutations. These differences between Rad52p and Rad51p suggest differential regulation of two proteins that interact in recombinational repair.


Author(s):  
Olusola Akinbami ◽  
Grace N Ngubeni ◽  
Francis Otieno ◽  
Rudo Kadzutu-Sithole ◽  
Cebisa Linganiso ◽  
...  

2D hybrid perovskites are promising materials for solar cell applications, in particular, cesium based perovskite nanocrystals as they offer the stability that is absent in organic-inorganic perovskite. However, the most...


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