Candidate genes for growth traits in beef cattle crosses Bos taurus x Bos indicus

2003 ◽  
Vol 120 (1) ◽  
pp. 51-56 ◽  
Author(s):  
D. D. Tambasco ◽  
C. C. P. Paz ◽  
M. Tambasco-Studart ◽  
A. P. Pereira ◽  
M. M. Alencar ◽  
...  
Keyword(s):  
Beef Cattle ◽  
Candidate Genes ◽  
Bos Taurus ◽  
Growth Traits ◽  
Bos Indicus

Evaluation of beef cattle genotypes and estimation of direct and maternal genetic effects in a tropical environment. 1. Growth traits

2003 ◽  
Vol 54 (10) ◽  
pp. 1013 ◽  
Author(s):  
K. C. Prayaga
Keyword(s):  
Beef Cattle ◽  
Least Squares ◽  
Bos Taurus ◽  
Growth Traits ◽  
Average Daily Gain ◽  
Bos Indicus ◽  
Genetic Effects ◽  
Additive Effects ◽  
Weaning Weight ◽  
Final Weight

Data from a crossbreeding experiment conducted during 1992–97 involving 31 genotypes from tropically adapted British (B), Sanga-derived (S), Zebu cross (Zx), Zebu (Z), and Continental (C) beef cattle breed groups were analysed to compare least-squares means, direct and maternal genetic effects, and heterosis estimates for birthweight, weaning weight, yearling weight, final weight (18 months), and pre- and post-weaning average daily gain (ADG). The genotypes were regrouped as Bos taurus (B, S, C)- and Bos indicus (Z, Zx)-derived groups to enable the comparison of direct (dD) and maternal (mD) dominance effects among indicine (II), taurine–indicine (TI), and taurine (TT) crosses. Genotype, contemporary group (year of birth, season of birth, and age of the dam), sex, and genotype × sex interactions were significant (P < 0.01) sources of variation for all the traits. Treatment to control parasites significantly (P < 0.01) affected post-weaning growth traits. In general, crossbred calves performed better than purebred calves. Z dam breeds resulted in lower birthweight, and Z sire breeds and S dam breeds resulted in heavier birthweights. For traits after birth, ZC and ZC crosses with S and Z showed heavier weights and higher gains. Prior to weaning, males weighed significantly more and gained weight at a faster rate than females in most of the crossbreds. Weight gain was relatively low between weaning and yearling age.Direct and maternal additive effects were estimated as a deviation from the British breed group mean for various traits. Direct additive effects of C, Z, and S were high and significantly different from the British mean for all the growth traits. Maternal additive effects of C were low and not significantly different from the British mean. Large negative maternal additive effects of Z and Zx caused lower birthweights of calves from Z and Zx dams. A decrease of maternal additive effect from weaning to final weight and pre-weaning to post-weaning ADG was noticed. The magnitude of dD effects was higher in TI crosses than in II crosses for all the traits except for birthweight, indicating the advantage of Bos taurus × Bos indicus crosses. In TT crosses, dD was only significant for weaning weight (P�<�0.01) and pre-weaning ADG (P < 0.05). Significant (P < 0.01) and positive mD effects observed in TI crosses indicated a better maternal environment provided by crossbred dams. High correlation coefficient estimates (0.92–0.99) between least-squares means and predicted means, observed for a set of F1 genotypes, indicated the prediction of performance of untested genotypes with reasonable accuracy. The per cent heterosis estimates were higher in Zebu × British breed crosses.

Expression of candidate genes for residual feed intake in tropically adapted Bos taurus and Bos indicus bulls under thermoneutral and heat stress environmental conditions

2021 ◽  
pp. 102998
Author(s):  
Bianca Vilela Pires ◽  
Nedenia Bonvino Stafuzza ◽  
Luara Afonso de Freitas ◽  
Maria Eugênia Zerlotti Mercadante ◽  
Ester Silveira Ramos ◽  
...  
Keyword(s):  
Heat Stress ◽  
Candidate Genes ◽  
Feed Intake ◽  
Environmental Conditions ◽  
Bos Taurus ◽  
Bos Indicus ◽  
Residual Feed Intake

Growth Traits and Composition of Two- and Three-Way-Cross Intact Male Progeny of Bos Taurus and Bos Indicus × Bos Taurus Dams

1987 ◽  
Vol 65 (1) ◽  
pp. 16-32 ◽  
Author(s):  
Karen M. Van Ornum ◽  
Curtiss M. Bailey ◽  
Thomas P. Ringkob ◽  
Young O. Koh
Keyword(s):  
Bos Taurus ◽  
Growth Traits ◽  
Bos Indicus ◽  
Intact Male ◽  
Male Progeny

scholarly journals Genome-wide scan for runs of homozygosity identifies potential candidate regions associated with growth traits in beef cattle

2020 ◽  
Author(s):  
Guoyao Zhao ◽  
Tianliu Zhang ◽  
Yuqiang Liu ◽  
Zezhao Wang ◽  
Lei Xu ◽  
...  
Keyword(s):  
Beef Cattle ◽  
Candidate Genes ◽  
Growth Traits ◽  
Farm Animals ◽  
Valuable Insight ◽  
Potential Candidate ◽  
Cattle Population ◽  
Runs Of Homozygosity ◽  
Genome Wide ◽  
Candidate Regions

Abstract Background: Runs of homozygosity (ROH) are continuous homozygous regions that generally exist in the DNA sequence of diploid organisms. Identifications of regions of the genome lead to reduction in performance can provide valuable insight into the genetic architecture of complex traits. Here, we evaluated genome-wide patterns of homozygosity and their association with growth traits in a commercial beef cattle population.Results: We identified a total of 29,271 ROH segments with an average number of 63.36 and an average length of 0.98 Mb in this commercial beef cattle population, representing ~2.53% (~63.36Mb) of the genome. To evaluate the enrichment of ROH across genomes, we initially identified 280 ROH regions by merging ROH events identified across all individuals. Of these, nine regions were significantly associated with six growth phenotype traits (body height, chest circumference, fat coverage, backfat thickness, ribeye area, carcass length; P<0.01), which contain 187 candidate genes. Furthermore, we found 26 consensus ROH regions with frequencies exceeding 10%, and several of these consensus overlapped with QTLs which are associated with weight gain, calving difficulty and stillbirth. To precisely locate locus within each ROH for every studied trait, we further utilized loci-based methods for association analysis among these identified regions. Totally, we obtained 9,360 loci within ROH, and 1,631 loci displaying significant association (P<0.01) for eight traits. In addition, we found that 67 genes embedded with homozygous loci. Several identified candidate genes, including EBF2, SLC20A2, SH3BGRL2, HMGA1 and ACSL1, were related to growth traits.Conclusions: This study assessed genome-wide autozygosity pattern and inbreeding level in a commercial beef cattle population. Our study identified many candidate regions and genes with ROH for growth traits in beef cattle, which can provide important insights into investigating homozygosity across genome in other farm animals. Our findings may further be unitized to assist the design of selection mating strategy.

scholarly journals Multiple association analysis of loci and candidate genes that regulate body size at three growth stages in Simmental beef cattle

2020 ◽  
Author(s):  
Bingxing An ◽  
Lei Xu ◽  
Jiangwei Xia ◽  
Xiaoqiao Wang ◽  
Jian Miao ◽  
...  
Keyword(s):  
Body Size ◽  
Beef Cattle ◽  
Candidate Genes ◽  
Association Analysis ◽  
Growth Traits ◽  
Association Studies ◽  
Growth Stages ◽  
Genome Wide Association Studies ◽  
Trait Analysis ◽  
Multiple Association

Abstract Background: Body size traits as one of the main breeding selection criteria was widely used to monitor cattle growth and to evaluate the selection response. In this study, body size was defined as body height (BH), body length (BL), hip height (HH), heart size (HS), abdominal size (AS), and cannon bone size (CS). We performed genome-wide association studies (GWAS) of these traits over the course of three growth stages (6, 12 and 18 months after birth) using three statistical models, single-trait GWAS, multi-trait GWAS and LONG-GWAS. The Illumina Bovine HD 770K BeadChip was used to identify genomic single nucleotide polymorphisms (SNPs) in 1217 individuals. Results: In total, 19, 29, and 10 significant SNPs were identified by the three models, respectively. Among these, 21 genes were promising candidate genes, including SOX2, SNRPD1, RASGEF1B, EFNA5, PTBP1, SNX9, SV2C, PKDCC, SYNDIG1, AKR1E2, and PRIM2 identified by single-trait analysis; SLC37A1, LAP3, PCDH7, MANEA, and LHCGR identified by multi-trait analysis; and P2RY1, MPZL1, LINGO2, CMIP, and WSCD1 identified by LONG-GWAS. Conclusions: Multiple association analysis was performed for six growth traits at each growth stage. These findings offer valuable insights for the further investigation of potential genetic mechanism of growth traits in Simmental beef cattle.

scholarly journals Multiple association analysis of loci and candidate genes that regulate body size at three growth stages in Simmental beef cattle

2020 ◽  
Author(s):  
Bingxing An ◽  
Lei Xu ◽  
Jiangwei Xia ◽  
Xiaoqiao Wang ◽  
Jian Miao ◽  
...  
Keyword(s):  
Body Size ◽  
Beef Cattle ◽  
Candidate Genes ◽  
Association Analysis ◽  
Growth Traits ◽  
Association Studies ◽  
Growth Stages ◽  
Genome Wide Association Studies ◽  
Trait Analysis ◽  
Multiple Association

Abstract Background: Body size traits as one of the main breeding selection criteria was widely used to monitor cattle growth and to evaluate the selection response. In this study, body size was defined as body height (BH), body length (BL), hip height (HH), heart size (HS), abdominal size (AS), and cannon bone size (CS). We performed genome-wide association studies (GWAS) of these traits over the course of three growth stages (6, 12 and 18 months after birth) using three statistical models, single-trait GWAS, multi-trait GWAS and LONG-GWAS. The Illumina Bovine HD 770K BeadChip was used to identify genomic single nucleotide polymorphisms (SNPs) in 1217 individuals. Results: In total, 19, 29, and 10 significant SNPs were identified by the three models, respectively. Among these, 21 genes were promising candidate genes, including SOX2, SNRPD1, RASGEF1B, EFNA5, PTBP1, SNX9, SV2C, PKDCC, SYNDIG1, AKR1E2, and PRIM2 identified by single-trait analysis; SLC37A1, LAP3, PCDH7, MANEA, and LHCGR identified by multi-trait analysis; and P2RY1, MPZL1, LINGO2, CMIP, and WSCD1 identified by LONG-GWAS. Conclusions: Multiple association analysis was performed for six growth traits at each growth stage. These findings offer valuable insights for the further investigation of potential genetic mechanism of growth traits in Simmental beef cattle.

scholarly journals 21 Performance of growing beef cattle consuming bahiagrass hay treated with calcium oxide and molasses and supplemented with cottonseed meal

2019 ◽  
Vol 97 (Supplement_1) ◽  
pp. 19-19
Author(s):  
Francine M Ciriaco ◽  
Darren D Henry ◽  
Luara B Canal ◽  
Carla D Sanford ◽  
Gonzalo Barreneche ◽  
...  
Keyword(s):  
Beef Cattle ◽  
Cottonseed Meal ◽  
Calcium Oxide ◽  
Fixed Effects ◽  
Bos Taurus ◽  
Block Design ◽  
Bos Indicus ◽  
Paspalum Notatum ◽  
Experimental Unit ◽  
Feed Withdrawal

Abstract An experiment was conducted to evaluate the effects of bahiagrass (Paspalum notatum) hay treated with calcium oxide (CaO) and molasses, offered ad libitum, on performance of growing beef cattle supplemented with cottonseed meal. Sixty-four growing Bos taurus and Bos indicus influenced heifers (249 ± 26 kg of BW) and steers (249 ± 20 kg of BW) were used in a randomized complete block design. The experiment consisted of a 56 d period in which animals were weighed every 14 d. On d 0, animals were weighed after 16-h water and feed withdrawal, stratified by sex, breed, and BW, and blocked by initial BW. Cattle were then allotted to 16 dormant bahiagrass pastures (1.34 ha each; 4 animals/pasture), which were located in 2 different areas within 0.52 km of each other. Pastures were stratified by location and randomly assigned (n = 8 pastures/treatment) to 1 of 2 treatments: 1) hay treated with 10% molasses (DM basis) + water (to 35% DM; MOL) or 2) hay treated with 5% CaO (DM basis) + 10% molasses (DM basis) + water (to 35% DM; CAO). Cottonseed meal was provided at a rate of 0.3% of cattle BW/d (as fed basis). Data were analyzed using the MIXED procedure of SAS and pasture was the experimental unit. The model included the fixed effects of treatment and sex. Location and block were included as random effects. Initial and final BW were not affected by treatment (P = 0.573, P = 0.453; initial and final BW, respectively) or sex (P = 0.512, P = 0.670; initial and final BW, respectively). Additionally, no effects of treatment (P = 0.767) or sex (P = 0.285) were observed on ADG (average of 0.537 kg). In conclusion, bahiagrass hay treated with molasses alone or in combination with CaO failed to improve performance of growing beef cattle

scholarly journals Effect of the g.98535683A > G SNP in the CAST gene on meat traits of Nellore beef cattle (Bos indicus) and their crosses with Bos taurus

Meat Science ◽  
2017 ◽  
Vol 123 ◽  
pp. 64-66 ◽  
Author(s):  
Cruz Elena Enriquez-Valencia ◽  
Guilherme Luis Pereira ◽  
Jessica Moraes Malheiros ◽  
Josineudson Augusto I.I. de Vasconcelos Silva ◽  
Lúcia Galvão Albuquerque ◽  
...  
Keyword(s):  
Beef Cattle ◽  
Bos Taurus ◽  
Bos Indicus ◽  
Cast Gene

scholarly journals 94 Performance of growing beef cattle consuming bahiagrass hay treated with calcium oxide and molasses and supplemented with cottonseed meal

2019 ◽  
Vol 97 (Supplement_1) ◽  
pp. 34-34
Author(s):  
Francine M Ciriaco ◽  
Darren D Henry ◽  
Luara B Canal ◽  
Carla D Sanford ◽  
Gonzalo Barreneche ◽  
...  
Keyword(s):  
Beef Cattle ◽  
Cottonseed Meal ◽  
Calcium Oxide ◽  
Fixed Effects ◽  
Bos Taurus ◽  
Block Design ◽  
Bos Indicus ◽  
Paspalum Notatum ◽  
Experimental Unit ◽  
Feed Withdrawal

Abstract An experiment was conducted to evaluate the effects of bahiagrass (Paspalum notatum) hay treated with calcium oxide (CaO) and molasses, offered ad libitum, on performance of growing beef cattle supplemented with cottonseed meal. Sixty-four growing Bos taurus and Bos indicus influenced heifers (249 ± 26 kg of BW) and steers (249 ± 20 kg of BW) were used in a randomized complete block design. The experiment consisted of a 56 d period in which animals were weighed every 14 d. On d 0, animals were weighed after 16-h water and feed withdrawal, stratified by sex, breed, and BW, and blocked by initial BW. Cattle were then allotted to 16 dormant bahiagrass pastures (1.34 ha each; 4 animals/pasture), which were located in 2 different areas within 0.52 km of each other. Pastures were stratified by location and randomly assigned (n = 8 pastures/treatment) to 1 of 2 treatments: 1) hay treated with 10% molasses (DM basis) + water (to 35% DM; MOL) or 2) hay treated with 5% CaO (DM basis) + 10% molasses (DM basis) + water (to 35% DM; CAO). Cottonseed meal was provided at a rate of 0.3% of cattle BW/d (as fed basis). Data were analyzed using the MIXED procedure of SAS and pasture was the experimental unit. The model included the fixed effects of treatment and sex. Location and block were included as random effects. Initial and final BW were not affected by treatment (P = 0.573, P = 0.453; initial and final BW, respectively) or sex (P = 0.512, P = 0.670; initial and final BW, respectively). Additionally, no effects of treatment (P = 0.767) or sex (P = 0.285) were observed on ADG (average of 0.537 kg). In conclusion, bahiagrass hay treated with molasses alone or in combination with CaO failed to improve performance of growing beef cattle

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