The use of qualitative airborne multispectral imaging for managing agricultural crops - a case study in south-eastern Australia

2000 ◽  
Vol 40 (5) ◽  
pp. 725 ◽  
Author(s):  
D. W. Lamb
Keyword(s):  
Capital Investment ◽  
Multispectral Imaging ◽  
Imaging System ◽  
Management Tool ◽  
Agricultural Crops ◽  
Multispectral Imagery ◽  
South Eastern ◽  
Eastern Australia ◽  
Synoptic Assessment ◽  
Ground Truthing

Charles Sturt University has operated an airborne multispectral imaging system as a research support and management tool over south-eastern Australian crops since 1994. Our experiences have demonstrated the utility, timeliness and cost-effectiveness of qualitative multispectral imagery for monitoring and managing spatial variability in a range of agricultural crops, yet to date the technology remains underutilised in Australia. Images showing variations in the texture of soils in paddocks are a useful indicator of the location of different soil zones for soil sampling, and can assist in siting of treatment plots within paddocks. Multispectral imagery can be used for a synoptic assessment of early weed pressure in fallow paddocks or seedling crops. Locating variability in crop emergence and, later, canopy vigour and biomass, are all potentially means of undertaking precision farming without the capital investment associated with yield mapping. However, like any remote monitoring tool, follow-up ground-truthing must always be used to establish or confirm the causes of observed variability. The use of the technology as part of a greater data acquisition strategy is recommended.

Fire exclusion and soil texture interact to influence temperate grassland flora in south-eastern Australia

2016 ◽  
Vol 64 (5) ◽  
pp. 417 ◽  
Author(s):  
Claire Moxham ◽  
Josh Dorrough ◽  
Mick Bramwell ◽  
Brad J. Farmilo
Keyword(s):  
Soil Texture ◽  
Spatial Scales ◽  
Temperate Grassland ◽  
Management Tool ◽  
Native Plant ◽  
Temperate Grasslands ◽  
South Eastern ◽  
Eastern Australia ◽  
Fire Exclusion ◽  
South Eastern Australia

Fire has a major influence on the structure and composition of temperate grasslands and woodlands. We investigated whether the impacts of fire exclusion on a temperate grassland plant community varied according to the scale of investigation and soil texture. Ten sites with known fire histories were selected along a soil texture gradient in south-eastern Australia. Floristics and ground layer attributes were investigated at small (0.25 m2) and large (100 m2) spatial scales in regularly burnt and unburnt grasslands. Fire exclusion over a 10 year period led to declines in native species diversity, richness and cover at both spatial scales and in most cases effects were consistent regardless of soil texture. However, the richness of native plant species at small scales and the cover of native plants at large scales were most negatively influenced by fire exclusion on fine textured soils. Conversely, at large scales, exotic plant richness and cover were only weakly increased by fire exclusion. Responses of eight common species were modelled and in seven of these, fire exclusion was a strong predictor of occurrence, although both positive and negative responses were observed. These results reiterate the importance of frequent fire as a management tool in temperate grasslands, but also shed light on how sites may require specific fire management regimes depending on the underlying soil texture.

Assessment of stocking effectiveness for Murray cod (Maccullochella peelii) and golden perch (Macquaria ambigua) in rivers and impoundments of south-eastern Australia

2016 ◽  
Vol 67 (10) ◽  
pp. 1410 ◽  
Author(s):  
Jamin Forbes ◽  
Robyn J. Watts ◽  
Wayne A. Robinson ◽  
Lee J. Baumgartner ◽  
Prue McGuffie ◽  
...  
Keyword(s):  
Stock Enhancement ◽  
Wild Fish ◽  
Management Tool ◽  
Target Species ◽  
Critical Information ◽  
South Eastern ◽  
Eastern Australia ◽  
Murray Cod ◽  
Batch Marking ◽  
South Eastern Australia

Stock enhancement is a management tool used for fishery recovery worldwide, yet the success of many stocking programs remains unquantified. Murray cod (Maccullochella peelii) and golden perch (Macquaria ambigua) are important Australian recreational target species that have experienced widespread decline. Stocking of these species has been undertaken for decades, with limited assessment of effectiveness. A batch marking and recapture approach was applied to assess stocked Murray cod and golden perch survival, contributions to wild fisheries, and condition in rivers and impoundments. Stocked fish were marked with calcein. Marked fish were detected during surveys undertaken 3 years and 10 months from initial marking, and it is probable that marks will persist beyond this time. The proportion of calcein marked fish in the population sub-sample whose age was equal to, or less than, the number of years since release, varied by 7–94% for Murray cod, and 9–98% for golden perch. Higher proportions of marked fish were found in impoundments than rivers. Marked Murray cod had significantly steeper length–weight relationships (i.e. higher weight at a given length) to unmarked fish. Our results show that application of methods for discriminating stocked and wild fish provides critical information for the development of adaptive, location-specific stocking strategies.

747 Evaluation of immune microenvironment of primary lung cancer and synchronous liver metastasis with multispectral imaging system

2020 ◽  
Vol 8 (Suppl 3) ◽  
pp. A795-A795
Author(s):  
Hyeonbin Cho ◽  
Jae-Hwan Kim ◽  
Ji-Hyun Kim
Keyword(s):  
T Cells ◽  
Liver Metastasis ◽  
Multispectral Imaging ◽  
Immune Cell ◽  
Imaging System ◽  
Cytotoxic T Cells ◽  
Primary Lung Cancer ◽  
Helper T Cells ◽  
Synchronous Liver Metastasis ◽  
Immune Microenvironment

BackgroundCancer immunotherapy (CIT) has substantially improved the survival of cancer patients. However, according to recent studies, liver metastasis was reported to predict worse outcomes for CIT. The main objective of the study is to evaluate the differences in the immune microenvironment (IME) between the primary lung cancer (PL) and synchronous liver metastasis (LM) using a multispectral imaging system.MethodsSix immune markers (CD4, CD8, CTLA-4, granzyme B (GZB), Foxp3 and PD-L1) were analyzed using a multiplex IHC system and inForm program (Akoya) on paired lung-liver samples of 10 patients. Cells were categorized into tumor nest and stroma, and cell counts per unit area were measured for comparison.ResultsThe number of tumor-infiltrating cytotoxic T cells (TIL) in PL (262.5 cells/mm2) was higher than that of LM (113.3 cells/mm2). Additionally, the ratio between the number of TIL and non-TIL was greater in PL (0.31) compared to that of LM (0.26). A similar trend appeared for Helper T cells and regulatory T cells (Treg), as PL consisted of higher numbers of T cells (791.8 Helper T cells/mm2, 195.7 Treg/mm2) than LM (626.3 Helper T cells/mm2, 121.3 Treg/mm2). However, cytotoxic T cells exhibiting GZB+ and CTLA-4- were fewer in PL (140.2 cells/mm2) than in LM (203.3 cells/mm2), and the ratio is 0.69. The mean number of GZB+ TIL in PL (32.5 cells/mm2) was lower than in LM (35.3 cells/mm2), and their proportions among total TIL counts were 0.12 and 0.31, respectively. In PL, GZB+: GZB- ratio is 0.16 while the ratio is 1.91 for LM. A fewer number of TILs exhibiting GZB suggests that PL has lower efficiency in immune response than LM. Another crucial checkpoint receptor that inhibits immune response, CTLA-4, was more prevalent in PL, with CTLA-4+: CTLA-4- ratio in Treg being 0.36 in PL, compared to 0.11 in LM. The tumor proportion score (TPS) of PD-L1 was higher in PL than LM (40.0 vs. 6.6).ConclusionsIn our study, we showed the differences in the numbers of TIL or regulatory T cells and expressions of immune checkpoint receptors (PD-L1, CTLA-4), which significantly influence outcomes for CIT. The study is ongoing to confirm different IME between the PL and LM groups in a larger tumor cohort.ReferencesPeng, Jianhong, et al., Immune Cell Infiltration in the Microenvironment of Liver Oligometastasis from Colorectal Cancer: Intratumoural CD8/CD3 Ratio Is a Valuable Prognostic Index for Patients Undergoing Liver Metastasectomy. Cancers 2019 Dec; 11(12): 1922. https://doi.org/10.3390/cancers11121922Tumeh, Paul C., et al., Liver Metastasis and treatment outcome with Anti-PD-1 monoclonal antibody in patients with melanoma and NSCLC. Cancer Immunol Res 2017 May; 5(5): 417–424. doi: 10.1158/2326-6066.CIR-16-0325Parra, E.R., Immune Cell Profiling in Cancer Using Multiplex Immunofluorescence and Digital Analysis Approaches; Streckfus, C.F., Ed.; IntechOpen: London, UK, 2018; pp. 1–13. doi: 10.5772/intechopen.80380Ribas, A., Hu-Lieskovan, S., What does PD-L1 positive or negative mean?. The Journal of Experimental Medicine 2016;213(13):2835–2840. https://doi.org/10.1084/jem.20161462

scholarly journals Optimized Method for Mapping Inorganic Pigments by Means of Multispectral Imaging Combined with Hyperspectral Spectroscopy for the Study of Vincenzo Pasqualoni’s Wall Painting at the Basilica of S. Nicola in Carcere in Rome

Minerals ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 839
Author(s):  
Lucilla Pronti ◽  
Giuseppe Capobianco ◽  
Margherita Vendittelli ◽  
Anna Candida Felici ◽  
Silvia Serranti ◽  
...  
Keyword(s):  
Multispectral Imaging ◽  
Imaging System ◽  
Principal Component ◽  
Reflectance Spectroscopy ◽  
Wall Painting ◽  
High Spectral Resolution ◽  
Spectral Difference ◽  
Color Palette ◽  
A Minor ◽  
Nir Reflectance Spectroscopy

Multispectral imaging is a preliminary screening technique for the study of paintings. Although it permits the identification of several mineral pigments by their spectral behavior, it is considered less performing concerning hyperspectral imaging, since a limited number of wavelengths are selected. In this work, we propose an optimized method to map the distribution of the mineral pigments used by Vincenzo Pasqualoni for his wall painting placed at the Basilica of S. Nicola in Carcere in Rome, combining UV/VIS/NIR reflectance spectroscopy and multispectral imaging. The first method (UV/VIS/NIR reflectance spectroscopy) allowed us to characterize pigment layers with a high spectral resolution; the second method (UV/VIS/NIR multispectral imaging) permitted the evaluation of the pigment distribution by utilizing a restricted number of wavelengths. Combining the results obtained from both devices was possible to obtain a distribution map of a pictorial layer with a high accuracy level of pigment recognition. The method involved the joint use of point-by-point hyperspectral spectroscopy and Principal Component Analysis (PCA) to identify the pigments in the color palette and evaluate the possibility to discriminate all the pigments recognized, using a minor number of wavelengths acquired through the multispectral imaging system. Finally, the distribution and the spectral difference of the different pigments recognized in the multispectral images, (in this case: red ochre, yellow ochre, orpiment, cobalt blue-based pigments, ultramarine and chrome green) were shown through PCA false-color images.

scholarly journals Characterizing the Tumor Immune Microenvironment with Tyramide-Based Multiplex Immunofluorescence

2020 ◽  
Vol 25 (4) ◽  
pp. 417-432
Author(s):  
Hidetoshi Mori ◽  
Jennifer Bolen ◽  
Louis Schuetter ◽  
Pierre Massion ◽  
Clifford C. Hoyt ◽  
...  
Keyword(s):  
Tumor Microenvironment ◽  
Multispectral Imaging ◽  
Imaging System ◽  
Predictive Biomarkers ◽  
Cell Types ◽  
Immune Microenvironment ◽  
Tumor Immune Microenvironment ◽  
Manual Processing ◽  
Cell Densities ◽  
Immune Profiling

AbstractMultiplex immunofluorescence (mIF) allows simultaneous antibody-based detection of multiple markers with a nuclear counterstain on a single tissue section. Recent studies have demonstrated that mIF is becoming an important tool for immune profiling the tumor microenvironment, further advancing our understanding of the interplay between cancer and the immune system, and identifying predictive biomarkers of response to immunotherapy. Expediting mIF discoveries is leading to improved diagnostic panels, whereas it is important that mIF protocols be standardized to facilitate their transition into clinical use. Manual processing of sections for mIF is time consuming and a potential source of variability across numerous samples. To increase reproducibility and throughput we demonstrate the use of an automated slide stainer for mIF incorporating tyramide signal amplification (TSA). We describe two panels aimed at characterizing the tumor immune microenvironment. Panel 1 included CD3, CD20, CD117, FOXP3, Ki67, pancytokeratins (CK), and DAPI, and Panel 2 included CD3, CD8, CD68, PD-1, PD-L1, CK, and DAPI. Primary antibodies were first tested by standard immunohistochemistry and single-plex IF, then multiplex panels were developed and images were obtained using a Vectra 3.0 multispectral imaging system. Various methods for image analysis (identifying cell types, determining cell densities, characterizing cell-cell associations) are outlined. These mIF protocols will be invaluable tools for immune profiling the tumor microenvironment.

Development of a Controller Unit for Multispectral Imaging System

2020 ◽  
Author(s):  
Mate Koba ◽  
Attila Trohak ◽  
Norbert Zajzon ◽  
Richard Zoltan Papp ◽  
Marton L. Kiss
Keyword(s):  
Multispectral Imaging ◽  
Imaging System
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