scholarly journals Crystal structure of the C-terminal domain of the RAP74 subunit of human transcription factor IIF

2001 ◽  
Vol 98 (6) ◽  
pp. 3115-3120 ◽  
Author(s):  
K. Kamada ◽  
J. De Angelis ◽  
R. G. Roeder ◽  
S. K. Burley
1999 ◽  
Vol 19 (11) ◽  
pp. 7377-7387 ◽  
Author(s):  
Delin Ren ◽  
Lei Lei ◽  
Zachary F. Burton

ABSTRACT Human transcription factor IIF (TFIIF) is an α2β2 heterotetramer of RNA polymerase II-associating 74 (RAP74) and RAP30 subunits. Mutagenic analysis shows that the N-terminal region of RAP74 between L155 (leucine at codon 155) and M177 is important for initiation. Mutants in this region have reduced activity in transcription, but none are inactive. Single amino acid substitutions at hydrophobic residues L155, W164, I176, and M177 have similar activity to RAP74(1–158), from which all but three amino acids of this region are deleted. Residual activity can be explained because each of these mutants forms a complex with RAP30 and recruits RNA polymerase II into the preinitiation complex. Mutants are defective for formation of the first phosphodiester bond from the adenovirus major late promoter but do not appear to have an additional significant defect in promoter escape. Negative DNA supercoiling partially compensates for the defects of TFIIF mutants in initiation, indicating that TFIIF may help to untwist the DNA helix for initiation.


2015 ◽  
Vol 71 (4) ◽  
pp. 844-853 ◽  
Author(s):  
Mads Beich-Frandsen ◽  
Eric Aragón ◽  
Marta Llimargas ◽  
Jordi Benach ◽  
Antoni Riera ◽  
...  

Gene-expression changes observed inDrosophilaembryos after inducing the transcription factor Tramtrack led to the identification of the protein Expansion. Expansion contains an N-terminal domain similar in sequence to the MH2 domain characteristic of Smad proteins, which are the central mediators of the effects of the TGF-β signalling pathway. Apart from Smads and Expansion, no other type of protein belonging to the known kingdoms of life contains MH2 domains. To compare the Expansion and Smad MH2 domains, the crystal structure of the Expansion domain was determined at 1.6 Å resolution, the first structure of a non-Smad MH2 domain to be characterized to date. The structure displays the main features of the canonical MH2 fold with two main differences: the addition of an α-helical region and the remodelling of a protein-interaction site that is conserved in the MH2 domain of Smads. Owing to these differences, to the new domain was referred to as Nα-MH2. Despite the presence of the Nα-MH2 domain, Expansion does not participate in TGF-β signalling; instead, it is required for other activities specific to the protostome phyla. Based on the structural similarities to the MH2 fold, it is proposed that the Nα-MH2 domain should be classified as a new member of the Smad/FHA superfamily.


2002 ◽  
Vol 277 (47) ◽  
pp. 45502-45509 ◽  
Author(s):  
Sebastiaan Werten ◽  
André Mitschler ◽  
Christophe Romier ◽  
Yann-Gaël Gangloff ◽  
Sylvie Thuault ◽  
...  

Cell Research ◽  
2014 ◽  
Vol 24 (12) ◽  
pp. 1433-1444 ◽  
Author(s):  
Hui Wang ◽  
Elizabeth C Curran ◽  
Thomas R Hinds ◽  
Edith H Wang ◽  
Ning Zheng

Sign in / Sign up

Export Citation Format

Share Document