scholarly journals RE-INTERPRETATION OF GENETIC VARIATION IN SIMOCEPHALUS (CLADOCERA, DAPHNIIDAE)

Genetics ◽  
1982 ◽  
Vol 102 (1) ◽  
pp. 101-107
Author(s):  
B J Hann ◽  
P D N Hebert

ABSTRACT Populations of several co-existing species of Simocephalus were examined electrophoretically at 11 enzyme loci. The prevailing pattern was one of extensive allelic substitution between species and low levels of polymorphism (0-10%) within species. Genetic identity values between species were very low (10-50%). These results concur with those for other cyclic parthenogens, but are in sharp contrast to previous interpretation of data derived from populations of Simocephalus from the same sites.

1986 ◽  
Vol 64 (10) ◽  
pp. 2246-2256 ◽  
Author(s):  
B. J. Hann ◽  
P. D. N. Hebert

Microgeographic analysis of enzyme genetic variation in populations in the littoral zone cladoceran Simocephalus in southwestern Ontario has disclosed very low levels of intrapopulation variability. The mean percentage of polymorphic loci per population was 10.5%, and individual heterozygosity averaged less than 5% over all populations. Population structure typifies that of randomly mating, outbred sexual species. Most populations were polyclonal, with a few common widespread clones and several rarer ones, often found in only one pond. There were no significant temporal patterns in genotypic frequencies, but spatial differentiation of populations suggested that both selection and founder effects have played roles in the evolutionary divergence of these cyclic parthenogens. Despite extremely low intrapopulation and moderate intraspecific variation, there was extensive differentiation between species. As a consequence of virtually complete allelic substitution at several loci and great similarity or identity of alleles at others, diagnostic loci were detected in three of the four species. Of the four distinct clusters of populations, differentiated at the species level, three represented species previously recognized in North America (S. cf. vetulus, S. cf. serrulatus, S. cf. exspinosus), and the fourth group was identified as S. cf. congener, related to a taxon occurring in Europe, but not reported from North America. The great amount of divergence between populations of S. cf. exspinosus suggests that a complex of at least two sibling species exists within this taxon.


Genetics ◽  
2003 ◽  
Vol 163 (1) ◽  
pp. 147-157 ◽  
Author(s):  
Arjun Sivasundar ◽  
Jody Hey

AbstractCaenorhabditis elegans has become one of the most widely used model research organisms, yet we have little information on evolutionary processes and recent evolutionary history of this widespread species. We examined patterns of variation at 20 microsatellite loci in a sample of 23 natural isolates of C. elegans from various parts of the world. One-half of the loci were monomorphic among all strains, and overall genetic variation at microsatellite loci was low, relative to most other species. Some population structure was detected, but there was no association between the genetic and geographic distances among different natural isolates. Thus, despite the nearly worldwide occurrence of C. elegans, little evidence was found for local adaptation in strains derived from different parts of the world. The low levels of genetic variation within and among populations suggest that recent colonization and population expansion might have occurred. However, the patterns of variation are not consistent with population expansion. A possible explanation for the observed patterns is the action of background selection to reduce polymorphism, coupled with ongoing gene flow among populations worldwide.


1996 ◽  
Vol 199 (1-2) ◽  
pp. 1-15 ◽  
Author(s):  
Cheryl S. Roesel ◽  
W. John Kress ◽  
Brunella Martire Bowditch
Keyword(s):  

1997 ◽  
Vol 45 (2) ◽  
pp. 199 ◽  
Author(s):  
Peter B. S. Spencer ◽  
Mark Adams ◽  
Helene Marsh ◽  
David J. Miller ◽  
Mark D. B. Eldridge

Estimates of genetic variation for a small (Ne = 39) colony of allied rock-wallabies (Petrogale assimilis) were calculated with three different categories of molecular marker. Average heterozygosity was estimated at 3·8% for allozymes, 47·3% for multilocus ‘DNA fingerprints’ and 85·5% for microsatellite markers. Overall these values indicate that this small isolated colony of rock-wallabies maintains a high level of genetic variation despite its relative isolation and the apparently low levels of migration between colonies. It is likely that mechanisms exist (such as kin avoidance, multiple mating systems, high and variable selective pressure in extreme and fluctuating environmental conditions) that promote the maintenance of high levels of genetic variation in isolated colonies of P. assimilis. These mechanisms are discussed in the context of the results obtained from the molecular markers.


1999 ◽  
Vol 13 (3) ◽  
pp. 531-541 ◽  
Author(s):  
Mark D. B. Eldridge ◽  
Juliet M. King ◽  
Anne K. Loupis ◽  
Peter B. S. Spencer ◽  
Andrea C. Taylor ◽  
...  

2007 ◽  
Vol 6 (8) ◽  
pp. 1421-1430 ◽  
Author(s):  
Smilja Teodorovic ◽  
John M. Braverman ◽  
Heidi G. Elmendorf

ABSTRACT Giardia lamblia, an intestinal pathogen of mammals, including humans, is a significant cause of diarrheal disease around the world. Additionally, the parasite is found on a lineage which separated early from the main branch in eukaryotic evolution. The extent of genetic diversity among G. lamblia isolates is insufficiently understood, but this knowledge is a prerequisite to better understand the role of parasite variation in disease etiology and to examine the evolution of mechanisms of genetic exchange among eukaryotes. Intraisolate genetic variation in G. lamblia has never been estimated, and previous studies on interisolate genetic variation have included a limited sample of loci. Here we report a population genetics study of intra- and interisolate genetic diversity based on six coding and four noncoding regions from nine G. lamblia isolates. Our results indicate exceedingly low levels of genetic variation in two out of three G. lamblia groups that infect humans; this variation is sufficient to allow identification of isolate-specific markers. Low genetic diversity at both coding and noncoding regions, with an overall bias towards synonymous substitutions, was discovered. Surprisingly, we found a dichotomous haplotype structure in the third, more variable G. lamblia group, represented by a haplotype shared with one of the homogenous groups and an additional group-specific haplotype. We propose that the distinct patterns of genetic-variation distribution among lineages are a consequence of the presence of genetic exchange. More broadly, our findings have implications for the regulation of gene expression, as well as the mode of reproduction in the parasite.


2011 ◽  
Vol 74 (3) ◽  
pp. 237-242 ◽  
Author(s):  
Andrzej Lewandowski ◽  
Jarosław Burczyk ◽  
Witold Wachowiak ◽  
Adam Boratyński ◽  
Wiesław Prus-Głowacki

Peat-bog pine <em>Pinus uliginosa</em> Neumann has become extinct or rare in many parts of Europe. We have investigated the levels of genetic variation and inbreeding in seeds collected from a highly endangered reserve of this species in Poland, using allozymes as genetic markers. Generally, a high level of genetic variation was observed. The mean expected heterozygosity was 0.376, while average (Na) and effective (Ne) numbers of alleles per locus were 2.45 and 1.67, respectively. Nevertheless, we have detected relatively low levels of outcrossing, and potential biparental inbreeding. The population-wide multilocus outcrossing rate was estimated to be 0.706 (±0.091), while the minimum variance mean of single-locus estimates was distinctly lower (ts=0.611). The estimates of outcrossing calculated for individual trees ranged widely from 0.051 to 1.017, indicating the complexity of outcrossing patterns. The investigated population of <em>P. uliginasa</em> from Węgliniec is small and surrounded by extensive forest stands of <em>P. sylvestris</em>. Our three-year records of phenological observations demonstrated that flowering periods for <em>P. uliginosa</em> and <em>P. sylvestris</em> overlap, allowing for cross-pollination. The possibility of <em>P. uliginosa</em> pollination by <em>P. sylvestris</em> creates a potential danger of genetic erosion of the <em>P. uliginosa</em> gene pool. Nonetheless, based on a species specific cpDNA marker we have found that among 533 seedlings of <em>P. uliginosa</em> there were only six seedlings carrying cpDNA marker specific for <em>P. sylvestris</em>, indicating that such hybridization seems to be rare.


Genetics ◽  
1977 ◽  
Vol 86 (1) ◽  
pp. 187-198
Author(s):  
F M Sene ◽  
H L Carson

ABSTRACT The species are endemic to the newest island in the archipelago and are broadly sympatric. They are easily distinguished morphologically in both sexes. Using standard electrophoretic procedures, we have examined 25 loci encoding for structural proteins from 539 silvestris and 325 heteroneura collected at three widely-separated localities where the two species are sympatric. Pairwise comparisons within and between the species show the following coefficients of genetic identity (Nei's I): within silvestris, 0.961 ± 0.01; within heteroneura, 0.949 ± 0.02; between silvestris and heteroneura, 0.939 ± 0.01. Neither the differences within nor between the species are significant. There are no fixed allelic differences either within or between the species. At the three areas of sympatry, the species show gene frequency differences (P &lt; 0.05) at 9, 11 and 13 loci respectively. This is not much different from the variation within either one of the species across the three localities. The two species have similar heterozygosity (H) levels (silvestris, 0.083; heteroneura, 0.089) and percent of polymorphic loci (both 0.37). It is suggested that despite their morphological divergence, these species are much more newly formed than classical sibling species. Significant allozymic differences may not have had time to accumulate.


1995 ◽  
Vol 30 (3) ◽  
pp. 349-358 ◽  
Author(s):  
James A. Richmond

Genetic variation among 14 populations of Dioryctria disclusa Heinrich adults was examined using starch gel electophoresis. The average number of alleles per locus exceeded 2.0 in all populations. The number of polymorphic loci exceeded 70% in 11 populations. Genetic structure data suggest moderate differentiation (average Fst, 0.111) among the populations. Most of the differentiation is attributable to three of the eight loci (MDH, ME, and IDH). Nei's genetic identity ranged from 0.77–1.00 between populations. A phenogram based on genetic identity and unweighted pair-group method of analysis (UPGMA) clustered five of six populations in North Carolina closely together. With a cophenetic correlation of 0.96 the phenogram constructed is acceptable.


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