Genetic Variation and Causes of Genotype-Environment Interaction in the Body Size of Blue Tit (Parus caeruleus)

Genetics ◽  
1998 ◽  
Vol 148 (3) ◽  
pp. 1233-1244 ◽  
Author(s):  
Juha Merilä ◽  
James D Fry
Keyword(s):  
Genetic Variation ◽  
Body Size ◽  
Genetic Variance ◽  
Natural Populations ◽  
The Body ◽  
Environment Interaction ◽  
Parus Caeruleus ◽  
Genotype Environment Interaction ◽  
The Poor ◽  
Good Environment

Abstract In several studies of natural populations of birds, the heritability of body size estimated by parent-offspring regression has been lower when offspring have developed in poor feeding regimens than when they developed in good feeding regimens. This has led to the suggestion that adaptation under poor regimens may be constrained by lack of genetic variation. We examined the influence of environmental conditions on expression of genetic variation in body size of nestling blue tits (Parus caeruleus) by raising full sibs in artificially reduced and enlarged broods, corresponding to good and poor feeding regimens, respectively. Individuals grown in the poor regimen attained smaller body size than their sibs grown in the good regimen. However, there was among-family variation in response to the treatments—i.e., genotype-environment interactions (GEIs). Partitioning the GEI variance into contributions attributable to (1) differences in the among-family genetic variance between the treatments and (2) imperfect correlation of genotypic values across treatments identified the latter as the main cause of the GEI. Parent-offspring regressions were not significantly different when offspring were reared in the good environment (h2 = 0.75) vs. when they were reared in the poor environment (h2 = 0.63). Thus, there was little evidence that genetic variance in body size was lower under the poor conditions than under the good conditions. These results do not support the view that the genetic potential for adaptation to poor feeding conditions is less than that for adaptation to good conditions, but they do suggest that different genotypes may be favored under the different conditions.

STUDIES ON NATURAL POPULATIONS OF DROSOPHILA. XII. HETEROSIS AND FITNESS CHARACTERS IN HYBRIDS BETWEEN DIFFERENT POPULATIONS OF DROSOPHILA MELANOGASTER

1970 ◽  
Vol 12 (4) ◽  
pp. 695-710 ◽  
Author(s):  
A. O. Tantawy ◽  
M. R. El-Helw
Keyword(s):  
Drosophila Melanogaster ◽  
Inbred Line ◽  
Egg Production ◽  
Natural Populations ◽  
Relative Fitness ◽  
Environment Interaction ◽  
Population Variance ◽  
Genotype Environment Interaction ◽  
The Poor ◽  
Different Populations

Three different unrelated natural populations of Drosophila melanogaster from Scotland, Japan and Egypt, as well a highly inbred line, were the basis of the present study. Crosses were made within and between natural populations and between each of the natural populations and the highly inbred line to obtain the parental, F1 and F2 generations and their relative fitness studied at 15°, 25° and 28 °C.The F1 interpopulation hybrids were superior to both parents in egg production, percentage emergence and longevity of adults in most of the crosses. Heterosis tended to be higher at 15° and 28° than at 25 °C. The F2 in all crosses was inferior to the F1 and also inferior to one or both parents. In crossing the inbred line with any of the natural populations, the F1 generally showed higher heterosis than that of the interpopulation hybrids; the F2 was also inferior to the F1 but superior to the inbred parent.Significant genotype-environment interaction was detected, indicating the differences in sensitivity to temperature in each population. Variance of any-given fitness character of a superior population at a given temperature was often smaller than the poor genotype. There was a decline in the coefficient of variation in the F1 generation and an increase in the F2's.

scholarly journals The Genetic Structure of Natural Populations of Drosophila melanogaster. XX. Comparison of Genotype-Environment Interaction in Viability Between a Northern and a Southern Population

Genetics ◽  
1987 ◽  
Vol 117 (2) ◽  
pp. 245-254
Author(s):  
Toshiyuki Takano ◽  
Shinichi Kusakabe ◽  
Terumi Mukai
Keyword(s):  
Drosophila Melanogaster ◽  
Genetic Variance ◽  
Additive Genetic Variance ◽  
Natural Populations ◽  
Environment Interaction ◽  
Southern Population ◽  
Genotypic Variance ◽  
Diversifying Selection ◽  
Genotype Environment Interaction ◽  
Interaction Variance

ABSTRACT In order to examine the operation of diversifying selection as the maintenance mechanism of excessive additive genetic variance for viability in southern populations in comparison with northern populations of Drosophila melanogaster, two sets of experiments were conducted using second chromosomes extracted from the Ogasawara population (a southern population in Japan) and from the Aomori population (a northern population in Japan). Chromosomal homozygote and heterozygote viabilities were estimated in eight kinds of artificially produced breeding environments. The main findings in the present investigation are as follows: (1) Significant genotype-environment interaction was observed using chromosomes extracted from the Ogasawara population. Indeed, the estimate of the genotype-environment interaction variance for heterozygotes was significantly larger than that of the genotypic variance. On the other hand, when chromosomes sampled from the Aomori population were examined, that interaction variance was significant only for homozygotes and its value was no more than one quarter of that for the chromosomes from the Ogasawara population. (2) The average genetic correlation between any two viabilities of the same lines estimated in the eight kinds of breeding environments for the chromosomes sampled from the Ogasawara population was smaller than that for the chromosomes from the Aomori population both in homozygotes and in heterozygotes, especially in the latter. (3) The stability of heterozygotes over homozygotes against fluctuations of environmental conditions was seen in the chromosomes from the Ogasawara population, but not from the Aomori population. (4) From the excessive genotype-environment interaction variance compared with the genotypic variance in heterozygotes, it was suggested for the chromosomes from the Ogasawara population that the reversal of viability order between homozygotes took place in some environments at the locus level. On the basis of these findings, it is strongly suggested that diversifying selection is operating in a southern population of D. melanogaster on some of the viability polygenes which are probably located outside the structural loci, and the excessive additive genetic variance of viability in southern populations is maintained by this type of selection.

THE GENETIC STRUCTURE OF NATURAL POPULATIONS OF DROSOPHILA MELANOGASTER. XIX. GENOTYPE-ENVIRONMENT INTERACTION IN VIABILITY

Genetics ◽  
1985 ◽  
Vol 111 (1) ◽  
pp. 43-55
Author(s):  
Hidenori Tachida ◽  
Terumi Mukai
Keyword(s):  
Drosophila Melanogaster ◽  
Genetic Variance ◽  
Culture Media ◽  
Additive Genetic Variance ◽  
Natural Populations ◽  
Environment Interaction ◽  
Diversifying Selection ◽  
Genotype Environment Interaction ◽  
Significant Difference ◽  
Experimental Findings

ABSTRACT To investigate whether or not an excess of additive genetic variance for viability detected in southern natural populations of Drosophila melanogaster was created by diversifying selection, genotype-environment interaction was tested as follows. (1) Two karyotype chromosomes were used: 61 second chromosomes with the standard karyotype and 63 second chromosomes carrying In(2L)t. Their homozygote viabilities were larger than 50% of the average viability of random heterozygotes. (2) The effects of two factors (culture media and yeasts) were examined at three levels (the culture media: tomato, corn and banana; and the yeasts: sake, brewer's and baker's). The results of 16 three by three factorial experiments by the Cy method in the same karyotype groups for relative viabilities of homozygotes and heterozygotes elucidated the following findings: (1) there was no significant difference between the two karyotype groups, (2) the variance components of genotype-environment interaction were highly significant, (3) the variance component of heterozygotes was significantly smaller than that of homozygotes. From the experimental findings and previous results, diversifying selection in natural populations acting on viability polygenes to increase the additive genetic variance was suggested. The relation of the present result to protein polymorphism is also discussed.

Evidence for multiple paternity in two species of Orconectes crayfish

2014 ◽  
Vol 92 (11) ◽  
pp. 985-988 ◽  
Author(s):  
A.F. Kahrl ◽  
R.H. Laushman ◽  
A.J. Roles
Keyword(s):  
Genetic Variation ◽  
Life History ◽  
Multiple Mating ◽  
Natural Populations ◽  
Multiple Paternity ◽  
The Body ◽  
Freshwater Crayfish ◽  
Decapod Crustaceans ◽  
Freshwater Habitats ◽  
Crayfish Species

Multiple mating is expected to be common in organisms that produce large clutches as a mechanism by which sexual reproduction can enrich genetic variation. For freshwater crayfish, observation of multiple mating suggests the potential for high rates of multiple paternity, but genetic confirmation is largely lacking from natural populations. We studied paternity within wild-caught broods of two crayfish species in the genus Orconectes (Sanborn’s crayfish (Orconectes sanbornii (Faxon, 1884)) and the Allegheny crayfish (Orconectes obscurus (Hagen, 1870))). Although females have been observed mating with multiple males, this is the first genetic confirmation of multiple paternity in broods of these two species. Berried females were collected in the field and maintained in aquaria until their eggs hatched. We amplified and genotyped extracted DNA from maternal and hatchling tissue for several microsatellite loci. For both species, paternity reconstruction (GERUD 2.0) yielded 2–3 sires per brood and no single paternity clutches. We discuss these results from natural populations in light of the body of work on reproductive ecology of decapod crustaceans and in the context of changes in life history following the transition from marine to freshwater habitats.

scholarly journals Genetic variation and natural selection on blue tit body condition in different environments

1999 ◽  
Vol 73 (2) ◽  
pp. 165-176 ◽  
Author(s):  
J. MERILÄ ◽  
R. PRZYBYLO ◽  
B. C. SHELDON
Keyword(s):  
Natural Selection ◽  
Body Condition ◽  
Genetic Variance ◽  
Condition Index ◽  
The Body ◽  
Phenotypic Variance ◽  
Body Condition Index ◽  
Blue Tit ◽  
Feeding Regime ◽  
The Poor

An increasing amount of evidence indicates that different forms of environmental stress influence the expression of genetic variance in quantitative traits and, consequently, their evolvability. We investigated the causal components of phenotypic variance and natural selection on the body condition index (a trait often related to fitness in wild bird populations) of blue tit (Parus caeruleus) nestlings under contrasting environmental conditions. In three different study years, nestlings grown under a poor feeding regime attained lower body condition than their full-sibs grown under a good feeding regime. Genetic influences on condition were large and significant in both feeding regimes, and in all three study years. However, although estimates of additive genetic variance were consistently higher in the poor than in the good environment, heritability estimates for body condition index were very similar in both environments due to higher levels of environmental variance in the poor environment. Evidence for weak genotype×environment interactions was obtained, but these contributed little to variance in nestling condition. Directional natural selection on fledging condition of nestlings was detected, and there were no indications of year or environmental effects on the form and intensity of selection observed, in a sample of 3659 nestlings over four years. However, selection on fledging condition was very weak (standardized selection gradient, β=0·027±0·016 SE), suggesting that, in the current population, the large additive genetic component to fledging condition is not particularly surprising. The results of these analyses are contrasted with those obtained for other populations and species with similar life-histories.

scholarly journals QTL mapping of genotype–environment interaction for fitness in Drosophila melanogaster

1998 ◽  
Vol 71 (2) ◽  
pp. 133-141 ◽  
Author(s):  
JAMES D. FRY ◽  
SERGEY V. NUZHDIN ◽  
ELENA G. PASYUKOVA ◽  
TRUDY F. C. MACKAY
Keyword(s):  
Environmental Heterogeneity ◽  
Natural Populations ◽  
Antagonistic Pleiotropy ◽  
Environment Interaction ◽  
Standard Medium ◽  
Fitness Effects ◽  
Genotype Environment Interaction ◽  
Different Temperatures ◽  
Temperature Interaction ◽  
Ri Lines

A fundamental assumption of models for the maintenance of genetic variation by environmental heterogeneity is that selection favours alternative alleles in different environments. It is not clear, however, whether such antagonistic pleiotropy is common. We mapped quantitative trait loci (QTLs) causing variation for reproductive performance in each of three environmental treatments among a set of 98 recombinant inbred (RI) lines derived from a cross between two D. melanogaster laboratory strains. The three treatments were standard medium at 25°C, ethanol-supplemented medium at 25°C, and standard medium at 18°C. The RI lines showed highly significant genotype–environment interaction for the fitness measure. Of six QTLs with significant effects on fitness in at least one of the environments, five had significantly different effects at the different temperatures. In each case, the QTL by temperature interaction arose because the QTL had stronger effects at one temperature than at the other. No evidence for QTLs with opposite fitness effects in different environments was found. These results, together with those of recent studies of crop plants, suggest that antagonistic pleiotropy is a relatively uncommon form of genotype–environment interaction for fitness, but additional studies of natural populations are needed to confirm this conclusion.

scholarly journals Properties of spontaneous mutations affecting quantitative traits

1999 ◽  
Vol 74 (3) ◽  
pp. 341-350 ◽  
Author(s):  
A. GARCÍA-DORADO ◽  
C. LÓPEZ-FANJUL ◽  
A. CABALLERO
Keyword(s):  
Deleterious Mutation ◽  
Natural Populations ◽  
Detectable Effect ◽  
Environment Interaction ◽  
Fitness Component ◽  
Standing Variation ◽  
Genotype Environment Interaction ◽  
Component Traits ◽  
Mutational Variance ◽  
New Mutations

Recent mutation accumulation results from invertebrate species suggest that mild deleterious mutation is far less frequent than previously thought, implying smaller expressed mutational loads. Although the rate (λ) and effect (s) of very slight deleterious mutation remain unknown, most mutational fitness decline would come from moderately deleterious mutation (s ≈ 0·2, λ ≈ 0·03), and this situation would not qualitatively change in harsh environments. Estimates of the average coefficient of dominance (h¯) of non-severe deleterious mutations are controversial. The typical value of h¯ = 0·4 can be questioned, and a lower estimate (about 0·1) is suggested. Estimated mutational parameters are remarkably alike for morphological and fitness component traits (excluding lethals), indicating low mutation rates and moderate mutational effects, with a distribution generally showing strong negative asymmetry and little leptokurtosis. New mutations showed considerable genotype–environment interaction. However, the mutational variance of fitness-component traits due to non-severe detrimental mutations did not increase with environmental harshness. For morphological traits, a class of predominantly additive mutations with no detectable effect on fitness and relatively small effect on the trait was identified. This should be close to that responsible for standing variation in natural populations.

scholarly journals Multiple layers of cryptic genetic variation underlie a yeast complex trait

2018 ◽  
Author(s):  
Jonathan T Lee ◽  
Alessandro L V Coradini ◽  
Amy Shen ◽  
Ian M Ehrenreich
Keyword(s):  
Genetic Variation ◽  
Complex Trait ◽  
Environment Interaction ◽  
Coding Region ◽  
Cryptic Genetic Variation ◽  
Genotype Environment Interaction ◽  
Genetic Perturbations ◽  
In Cis ◽  
The Relationship ◽  
Surface Gene

Cryptic genetic variation may be an important contributor to heritable traits, but its extent and regulation are not fully understood. Here, we investigate the cryptic genetic variation underlying a Saccharomyces cerevisiae colony phenotype that is typically suppressed in a cross of the lab strain BY4716 (BY) and a derivative of the clinical isolate 322134S (3S). To do this, we comprehensively map the trait's genetic basis in the BYx3S cross in the presence of three different genetic perturbations that enable its expression. This allows us to detect and compare the specific loci harboring cryptic genetic variants that interact with each perturbation. In total, we identify 21 loci, all but one of which interacts with just a subset of the perturbations. Beyond impacting which loci contribute to the trait, the genetic perturbations also influence the extent of additivity, epistasis, and genotype-environment interaction among the detected loci. Additionally, we show that the single locus interacting with all three perturbations corresponds to the coding region of the cell surface gene FLO11. Nearly all of the other loci influence FLO11 transcription in cis or trans. However, the perturbations reveal cryptic genetic variation in different pathways and sub-pathways upstream of FLO11, suggesting that multiple layers of cryptic genetic variation with highly contextual effects underlie the trait. Our work demonstrates an abundance of cryptic genetic variation in transcriptional regulation and illustrates how this cryptic genetic variation complicates efforts to study the relationship between genotype and phenotype.

scholarly journals Artificial selection on male size depletes genetic variance but not covariance of life history traits in the yellow dung fly

2019 ◽  
Author(s):  
WU Blanckenhorn ◽  
V Llaurens ◽  
C Reim ◽  
Y Teuschl ◽  
E Postma
Keyword(s):  
Genetic Variation ◽  
Life History ◽  
Body Size ◽  
Artificial Selection ◽  
Development Time ◽  
Life History Traits ◽  
Genetic Variance ◽  
Genetic Correlations ◽  
Male Size ◽  
First Clutch

SUMMARYThe evolutionary potential of organisms depends on the presence of sufficient genetic variation for traits subject to selection, as well as on the genetic covariances among them. While genetic variation ultimately derives from mutation, theory predicts the depletion of genetic (co)variation under consistent directional or stabilizing selection in natural populations. We estimated and compared additive genetic (co)variances for several standard life history traits, including some for which this has never been assessed, before and after 24 generations of artificial selection on male size in the yellow dung fly Scathophaga stercoraria (Diptera: Scathophagidae) using a series of standard half-sib breeding experiments. As predicted, genetic variances (VA), heritabilities (h2) and evolvabilities (IA) of body size, development time, first clutch size, and female age at first clutch were lower after selection. As independent selection lines were crossed prior to testing, we can rule out that this reduction is due to genetic drift. In contrast to the variances, and against expectation, the additive genetic correlations between the sexes for development time and body size remained strong and positive (rA = 0.8–0.9), while the genetic correlation between these traits within the sexes tended to strengthen (but not significantly so). Our study documents that the effect of selection on genetic variance is predictable, whereas that on genetic correlations is not.

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