Scale dependence in the phylogenetic relatedness of alien and native taxa

2020 ◽  
Vol 13 (5) ◽  
pp. 601-610
Author(s):  
Chris M McGrannachan ◽  
Gillis J Horner ◽  
Melodie A McGeoch

Abstract Aims Darwin’s naturalization hypothesis proposes that successfully established alien species are less closely related to native species due to differences in their ecological niches. Studies have provided support both for and against this hypothesis. One reason for this is the tendency for phylogenetic clustering between aliens and natives at broad spatial scales with overdispersion at fine scales. However, little is known about how the phylogenetic relatedness of alien species alters the phylogenetic structure of the communities they invade, and at which spatial scales effects may manifest. Here, we examine if invaded understorey plant communities, i.e. containing both native and alien taxa, are phylogenetically clustered or overdispersed, how relatedness changes with spatial scale and how aliens affect phylogenetic patterns in understorey communities. Methods Field surveys were conducted in dry forest understorey communities in south-east Australia at five spatial scales (1, 20, 500, 1500 and 4500 m2). Standardized effect sizes of two metrics were used to quantify phylogenetic relatedness between communities and their alien and native subcommunities, and to examine how phylogenetic patterns change with spatial scale: (i) mean pairwise distance and (ii) mean nearest taxon distance (MNTD). Important Findings Aliens were closely related to each other, and this relatedness tended to increase with scale. Native species and the full community exhibited either no clear pattern of relatedness with increasing spatial scale or were no different from random. At intermediate spatial scales (20–500 m2), the whole community tended towards random whereas the natives were strongly overdispersed and the alien subcommunity strongly clustered. This suggests that invasion by closely related aliens shifts community phylogenetic structure from overdispersed towards random. Aliens and natives were distantly related across spatial scales, supporting Darwin’s naturalization hypothesis, but only when phylogenetic distance was quantified as MNTD. Phylogenetic dissimilarity between aliens and natives increased with spatial scale, counter to expected patterns. Our findings suggest that the strong phylogenetic clustering of aliens is driven by human-mediated introductions involving closely related taxa that can establish and spread successfully. Unexpected scale-dependent patterns of phylogenetic relatedness may result from stochastic processes such as fire and dispersal events and suggest that competition and habitat filtering do not exclusively dominate phylogenetic relationships at fine and coarse spatial scales, respectively. Distinguishing between metrics that focus on different evolutionary depths is important, as different metrics can exhibit different scale-dependent patterns.

2016 ◽  
Vol 283 (1838) ◽  
pp. 20160663 ◽  
Author(s):  
Chao Ma ◽  
Shao-peng Li ◽  
Zhichao Pu ◽  
Jiaqi Tan ◽  
Manqiang Liu ◽  
...  

Darwin's naturalization hypothesis (DNH), which predicts that alien species more distantly related to native communities are more likely to naturalize, has received much recent attention. The mixed findings from empirical studies that have tested DNH, however, seem to defy generalizations. Using meta-analysis to synthesize results of existing studies, we show that the predictive power of DNH depends on both the invasion stage and the spatial scale of the studies. Alien species more closely related to natives tended to be less successful at the local scale, supporting DNH; invasion success, however, was unaffected by alien–native relatedness at the regional scale. On the other hand, alien species with stronger impacts on native communities tended to be more closely related to natives at the local scale, but less closely related to natives at the regional scale. These patterns are generally consistent across different ecosystems, taxa and investigation methods. Our results revealed the different effects of invader–native relatedness on invader success and impact, suggesting the operation of different mechanisms across invasion stages and spatial scales.


2021 ◽  
Author(s):  
Ali Omer ◽  
Trevor Fristoe ◽  
Qiang Yang ◽  
Mialy Razanajatovo ◽  
Patrick Weigelt ◽  
...  

Abstract Darwin’s naturalization hypothesis predicts successful invaders to be distantly related to native species, whereas his pre-adaptation hypothesis predicts the opposite. It has been suggested that depending on the invasion stage (i.e. introduction, naturalization, and invasiveness), both hypotheses, now known as Darwin’s naturalization conundrum, could hold true. We tested this by analysing whether the likelihood of introduction for cultivation as well as subsequent stages of naturalization and invasion of species alien to Southern Africa are correlated with their phylogenetic distance to the native flora of this region. While species were more likely to be introduced for cultivation if they are distantly related to the native flora, the probability of subsequent naturalization was higher for species closely related to the native flora. Furthermore, the probability of becoming invasive was higher for naturalized species distantly related to the native flora. These results were consistent across three different metrics of phylogenetic distance. Our study reveals that the relationship between phylogenetic distance to the native flora and success of an alien species depends on the invasion stage.


Author(s):  
Eva Maria Malecore ◽  
Mark van Kleunen

1. Darwin’s naturalization hypothesis predicts that alien species closely related to native species are less likely to naturalize because of strong competition due to niche overlap. Closely related species are likely to attract similar herbivores and to release similar plant volatiles following herbivore attack, thus could attract the same predators. However, the importance of phylogenetic relatedness on the interaction between alien and native plants has never been tested in a multitrophic context. 2. In a mesocosm experiment we grew six alien target plant species alone and in competition with nine native plant species of varying phylogenetic relatedness. To test the effects of multitrophic interactions on the performance of alien target species, we used enclosure cages to expose plants to the presence and absence of herbivorous arthropods, predatory arthropods and nematodes. 3. Surprisingly, biomass and number of flowering structures increased with presence of competitors for some of the alien species, but overall there was no consistent competition effect. Similarly, we found that none of the multitrophic-interaction treatments affected survival, biomass or number of flowering structures of the alien species. 4. We conclude there was no significant relationship between performance measures of the alien species and their phylogenetic relatedness to the native competitors.


2014 ◽  
Vol 281 (1778) ◽  
pp. 20133003 ◽  
Author(s):  
Angela L. Strecker ◽  
Julian D. Olden

Despite long-standing interest of terrestrial ecologists, freshwater ecosystems are a fertile, yet unappreciated, testing ground for applying community phylogenetics to uncover mechanisms of species assembly. We quantify phylogenetic clustering and overdispersion of native and non-native fishes of a large river basin in the American Southwest to test for the mechanisms (environmental filtering versus competitive exclusion) and spatial scales influencing community structure. Contrary to expectations, non-native species were phylogenetically clustered and related to natural environmental conditions, whereas native species were not phylogenetically structured, likely reflecting human-related changes to the basin. The species that are most invasive (in terms of ecological impacts) tended to be the most phylogenetically divergent from natives across watersheds, but not within watersheds, supporting the hypothesis that Darwin's naturalization conundrum is driven by the spatial scale. Phylogenetic distinctiveness may facilitate non-native establishment at regional scales, but environmental filtering restricts local membership to closely related species with physiological tolerances for current environments. By contrast, native species may have been phylogenetically clustered in historical times, but species loss from contemporary populations by anthropogenic activities has likely shaped the phylogenetic signal. Our study implies that fundamental mechanisms of community assembly have changed, with fundamental consequences for the biogeography of both native and non-native species.


Author(s):  
Daniel Sol ◽  
Joan Garcia-Porta ◽  
César González-Lagos ◽  
Alex Pigot ◽  
Joseph Tobias ◽  
...  

Despite biological invasions are one of the main environmental problems of the twenty-first century, there is still no theoretical or empirical agreement on whether a high phylogenetic relatedness between exotic and native species positively or negatively affect invasion success. To resolve this conundrum, it has been proposed that the effect might be scale-dependent, being negative at smaller spatial scales and positive at larger scales. Here we show that this scale-dependent pattern may be a sampling artefact associated with species-area effects and a non-random pattern of species introductions. We support this conclusion with simulations and empirical data on invaded and non-invaded avian communities in regions from five continents. We further show that at smaller-scales —where these artifacts are negligible— invasion success generally increases with the presence of closely-related species, but that predictive accuracy largely depends on considering the influence of human-related disturbances in facilitating invasions.


2021 ◽  
Author(s):  
Elizabeth G. Simpson ◽  
William D. Pearse

AbstractThe relative influence of ecological assembly processes, such as environmental filtering, competition, and dispersal, vary across spatial scales. Changes in phylogenetic and taxonomic diversity across environments provide insight into these processes, however, it is challenging to assess the effect of spatial scale on these metrics. Here, we outline a nested sampling design that fractally spaces sampling locations to concentrate statistical power across spatial scales in a study area. We test this design in northeast Utah, at a study site with distinct vegetation types (including sagebrush steppe and mixed conifer forest), that vary across environmental gradients. We demonstrate the power of this design to detect changes in community phylogenetic diversity across environmental gradients and assess the spatial scale at which the sampling design captures the most variation in empirical data. We find clear evidence of broad-scale changes in multiple features of phylogenetic and taxonomic diversity across aspect. At finer scales, we find additional variation in phylo-diversity, highlighting the power of our fractal sampling design to efficiently detect patterns across multiple spatial scales. Thus, our fractal sampling design and analysis effectively identify important environmental gradients and spatial scales that drive community phylogenetic structure. We discuss the insights this gives us into the ecological assembly processes that differentiate plant communities found in northeast Utah.


2021 ◽  
Vol 13 (12) ◽  
pp. 2355
Author(s):  
Linglin Zeng ◽  
Yuchao Hu ◽  
Rui Wang ◽  
Xiang Zhang ◽  
Guozhang Peng ◽  
...  

Air temperature (Ta) is a required input in a wide range of applications, e.g., agriculture. Land Surface Temperature (LST) products from Moderate Resolution Imaging Spectroradiometer (MODIS) are widely used to estimate Ta. Previous studies of these products in Ta estimation, however, were generally applied in small areas and with a small number of meteorological stations. This study designed both temporal and spatial experiments to estimate 8-day and daily maximum and minimum Ta (Tmax and Tmin) on three spatial scales: climate zone, continental and global scales from 2009 to 2018, using the Random Forest (RF) method based on MODIS LST products and other auxiliary data. Factors contributing to the relation between LST and Ta were determined based on physical models and equations. Temporal and spatial experiments were defined by the rules of dividing the training and validation datasets for the RF method, in which the stations selected in the training dataset were all included or not in the validation dataset. The RF model was first trained and validated on each spatial scale, respectively. On a global scale, model accuracy with a determination coefficient (R2) > 0.96 and root mean square error (RMSE) < 1.96 °C and R2 > 0.95 and RMSE < 2.55 °C was achieved for 8-day and daily Ta estimations, respectively, in both temporal and spatial experiments. Then the model was trained and cross-validated on each spatial scale. The results showed that the data size and station distribution of the study area were the main factors influencing the model performance at different spatial scales. Finally, the spatial patterns of the model performance and variable importance were analyzed. Both daytime and nighttime LST had a significant contribution in the 8-day Tmax estimation on all the three spatial scales; while their contribution in daily Tmax estimation varied over different continents or climate zones. This study was expected to improve our understanding of Ta estimation in terms of accuracy variations and influencing variables on different spatial and temporal scales. The future work mainly includes identifying underlying mechanisms of estimation errors and the uncertainty sources of Ta estimation from a local to a global scale.


2021 ◽  
Vol 41 (3) ◽  
pp. 358-366
Author(s):  
Peter B. Banks

Distinguishing between whether a species is alien or native can be problematic, especially for introduced species that are long-established in new areas outside of their natural range. Transport by humans is the criterion for alien status used by many definitions, whereas arbitrary time since arrival to a location is often used to define native status. Here I propose an eco-evolutionary approach to distinguish between alien and native status and use this to resolve uncertainty in the status of the dingo in Australia. Dingoes were transported to mainland Australia by humans, but more than 4000 years ago, and dingoes now interbreed with feral domestic dogs. Legally, this mix of events has the dingo classified as native in some jurisdictions and alien in others. I suggest that native status for introduced species should be based on (1) whether the species has evolved in their new environment; (2) whether local species recognise and respond to them as they do towards deep endemic native species, and; (3) whether their impacts benchmark against those of a native species or are exaggerated like those of other alien species. Dingoes are behaviourally, reproductively and morphologically different to close ancestors from south-east Asia, and this difference has a genetic basis indicative of evolution in Australia. There is abundant evidence that native prey species on mainland Australia recognise and respond to them as a dangerous predator, which they are. But there is strong evidence that dingo impacts on prey are not exaggerated, with effect sizes from mensurative experiments similar to those of experiments on native predators rather than alien predators. These three lines of evidence suggest dingoes should be considered native to mainland Australia. I suggest this eco-evolutionary approach to defining native status can be helpful in resolving the often-heated debates about when an alien species becomes native.


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