scholarly journals Automated detection of lameness in sheep using machine learning approaches: novel insights into behavioural differences among lame and non-lame sheep

2020 ◽  
Vol 7 (1) ◽  
pp. 190824
Author(s):  
Jasmeet Kaler ◽  
Jurgen Mitsch ◽  
Jorge A. Vázquez-Diosdado ◽  
Nicola Bollard ◽  
Tania Dottorini ◽  
...  

Lameness in sheep is the biggest cause of concern regarding poor health and welfare among sheep-producing countries. Best practice for lameness relies on rapid treatment, yet there are no objective measures of lameness detection. Accelerometers and gyroscopes have been widely used in human activity studies and their use is becoming increasingly common in livestock. In this study, we used 23 datasets (10 non-lame and 13 lame sheep) from an accelerometer- and gyroscope-based ear sensor with a sampling frequency of 16 Hz to develop and compare algorithms that can differentiate lameness within three different activities (walking, standing and lying). We show for the first time that features extracted from accelerometer and gyroscope signals can differentiate between lame and non-lame sheep while standing, walking and lying. The random forest algorithm performed best for classifying lameness with an accuracy of 84.91% within lying, 81.15% within standing and 76.83% within walking and overall correctly classified over 80% sheep within activities. Both accelerometer- and gyroscope-based features ranked among the top 10 features for classification. Our results suggest that novel behavioural differences between lame and non-lame sheep across all three activities could be used to develop an automated system for lameness detection.

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Balamurugan Sadaiappan ◽  
Chinnamani PrasannaKumar ◽  
V. Uthara Nambiar ◽  
Mahendran Subramanian ◽  
Manguesh U. Gauns

AbstractCopepods are the dominant members of the zooplankton community and the most abundant form of life. It is imperative to obtain insights into the copepod-associated bacteriobiomes (CAB) in order to identify specific bacterial taxa associated within a copepod, and to understand how they vary between different copepods. Analysing the potential genes within the CAB may reveal their intrinsic role in biogeochemical cycles. For this, machine-learning models and PICRUSt2 analysis were deployed to analyse 16S rDNA gene sequences (approximately 16 million reads) of CAB belonging to five different copepod genera viz., Acartia spp., Calanus spp., Centropages sp., Pleuromamma spp., and Temora spp.. Overall, we predict 50 sub-OTUs (s-OTUs) (gradient boosting classifiers) to be important in five copepod genera. Among these, 15 s-OTUs were predicted to be important in Calanus spp. and 20 s-OTUs as important in Pleuromamma spp.. Four bacterial s-OTUs Acinetobacter johnsonii, Phaeobacter, Vibrio shilonii and Piscirickettsiaceae were identified as important s-OTUs in Calanus spp., and the s-OTUs Marinobacter, Alteromonas, Desulfovibrio, Limnobacter, Sphingomonas, Methyloversatilis, Enhydrobacter and Coriobacteriaceae were predicted as important s-OTUs in Pleuromamma spp., for the first time. Our meta-analysis revealed that the CAB of Pleuromamma spp. had a high proportion of potential genes responsible for methanogenesis and nitrogen fixation, whereas the CAB of Temora spp. had a high proportion of potential genes involved in assimilatory sulphate reduction, and cyanocobalamin synthesis. The CAB of Pleuromamma spp. and Temora spp. have potential genes accountable for iron transport.


2019 ◽  
Vol 11 (10) ◽  
pp. 1195 ◽  
Author(s):  
Minsang Kim ◽  
Myung-Sook Park ◽  
Jungho Im ◽  
Seonyoung Park ◽  
Myong-In Lee

This study compared detection skill for tropical cyclone (TC) formation using models based on three different machine learning (ML) algorithms-decision trees (DT), random forest (RF), and support vector machines (SVM)-and a model based on Linear Discriminant Analysis (LDA). Eight predictors were derived from WindSat satellite measurements of ocean surface wind and precipitation over the western North Pacific for 2005–2009. All of the ML approaches performed better with significantly higher hit rates ranging from 94 to 96% compared with LDA performance (~77%), although false alarm rate by MLs is slightly higher (21–28%) than that by LDA (~13%). Besides, MLs could detect TC formation at the time as early as 26–30 h before the first time diagnosed as tropical depression by the JTWC best track, which was also 5 to 9 h earlier than that by LDA. The skill differences across MLs were relatively smaller than difference between MLs and LDA. Large yearly variation in forecast lead time was common in all models due to the limitation in sampling from orbiting satellite. This study highlights that ML approaches provide an improved skill for detecting TC formation compared with conventional linear approaches.


Author(s):  
Chuan Liu ◽  
Sheng-Xiang Yan ◽  
Xiao-Bo Wu ◽  
Zhi-Jun Zhang ◽  
Wei Li

A 'little brother' of pain, itch is an unpleasant sensation that creates a specific urge to scratch. To date, various machine-learning based image classifiers (MBICs) have been proposed for quantitative analysis of itch-induced scratch behaviour of laboratory animals in an automated, non-invasive, inexpensive and real-time manner. In spite of MBICs' advantages, the overall performances (accuracy, sensitivity and specificity) of current MBIC approaches remains inconsistent, with their values varying from ~50% to ~99%, for which the reasons underlying have yet to be investigated further, both computationally and experimentally. To look into the variation of the performance of MBICs in automated detection of itch-induced scratch, this article focuses on the experimental data recording step, and reports here for the first time that MBICs' overall performance is inextricably linked to the sharpness of experimentally recorded video of laboratory animal scratch behaviour. This article furthermore demonstrates for the first time that a linearly correlated relationship exists between video sharpness and overall performance (accuracy and specificity, but not sensitivity) of MBICs, and highlight the primary role of experimental data recording in rapid, accurate and consistent quantitative assessment of laboratory animal itch.


2021 ◽  
Vol ahead-of-print (ahead-of-print) ◽  
Author(s):  
Mu Yang ◽  
Chunjia Han

Purpose This study aims to conduct a “real-time” investigation with user-generated content on Twitter to reveal industry challenges and business responses to the coronavirus (Covid-19) pandemic. Specifically, using the hospitality industry as an example, the study analyses how Covid-19 has impacted the industry, what are the challenges and how the industry has responded. Design/methodology/approach With 94,340 tweets collected between October 2019 and May 2020 by a programmed Web scraper, unsupervised machine learning approaches such as structural topic modelling are applied. Originality/value This study contributes to the literature on business response during crises providing for the first time a study of using unstructured content on social media for industry-level analysis in the hospitality context.


Author(s):  
Mustafa Berkant Selek ◽  
Sude Pehlivan ◽  
Yalcin Isler

Cardiovascular diseases, which involve heart and blood vessel dysfunctions, cause a higher number of deaths than any other disease in the world. Throughout history, many approaches have been developed to analyze cardiovascular health by diagnosing such conditions. One of the methodologies is recording and analyzing heart sounds to distinguish normal and abnormal functioning of the heart, which is called Phonocardiography. With the emergence of machine learning applications in healthcare, this process can be automated via the extraction of various features from phonocardiography signals and performing classification with several machine learning algorithms. Many studies have been conducted to extract time and frequency domain features from the phonocardiography signals by segmenting them first into individual heart cycles, and then by classifying them using different machine learning and deep learning approaches. In this study, various time and frequency domain features have been extracted using the complete signal rather than just segments of it. Random Forest algorithm was found to be the most successful algorithm in terms of accuracy as well as recall and precision.


2021 ◽  
pp. 1-18
Author(s):  
Aaron Erlich ◽  
Stefano G. Dantas ◽  
Benjamin E. Bagozzi ◽  
Daniel Berliner ◽  
Brian Palmer-Rubin

Abstract Political scientists increasingly use supervised machine learning to code multiple relevant labels from a single set of texts. The current “best practice” of individually applying supervised machine learning to each label ignores information on inter-label association(s), and is likely to under-perform as a result. We introduce multi-label prediction as a solution to this problem. After reviewing the multi-label prediction framework, we apply it to code multiple features of (i) access to information requests made to the Mexican government and (ii) country-year human rights reports. We find that multi-label prediction outperforms standard supervised learning approaches, even in instances where the correlations among one’s multiple labels are low.


Author(s):  
Matthew N. O. Sadiku ◽  
Chandra M. M Kotteti ◽  
Sarhan M. Musa

Machine learning is an emerging field of artificial intelligence which can be applied to the agriculture sector. It refers to the automated detection of meaningful patterns in a given data.  Modern agriculture seeks ways to conserve water, use nutrients and energy more efficiently, and adapt to climate change.  Machine learning in agriculture allows for more accurate disease diagnosis and crop disease prediction. This paper briefly introduces what machine learning can do in the agriculture sector.


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