scholarly journals ICTV Virus Taxonomy Profile: Inoviridae

2021 ◽  
Vol 102 (7) ◽  
Author(s):  
Petar Knezevic ◽  
Evelien M. Adriaenssens ◽  
Keyword(s):  
Bacterial Genome ◽  
International Committee ◽  
Gram Negative Bacteria ◽  
Virus Taxonomy ◽  
Rolling Circle ◽  
The Family ◽  
Phage Dna ◽  
Positive Sense ◽  
Filamentous Bacteriophages ◽  
Rolling Circle Mechanism

Members of the family Inoviridae are non-enveloped flexible filamentous bacteriophages (600–2500×6–10 nm) with supercoiled, circular, positive-sense, single-stranded DNA genomes of 5.5–10.6 kb, encoding 7–15 proteins. They absorb to the pili of Gram-negative bacteria and replicate their DNA by a rolling-circle mechanism with progeny released from cells by extrusion without killing the host. Phage DNA can persist extra-chromosomally or integrate into the bacterial genome. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Inoviridae, which is available at ictv.global/report/inoviridae.

scholarly journals ICTV Virus Taxonomy Profile: Plectroviridae

2021 ◽  
Vol 102 (5) ◽  
Author(s):  
Petar Knezevic ◽  
Evelien M. Adriaenssens ◽  
Keyword(s):  
Cell Wall ◽  
International Committee ◽  
Virus Taxonomy ◽  
Single Stranded Dna ◽  
Rolling Circle ◽  
Bacterial Surface ◽  
Link Type ◽  
Rigid Rods ◽  
The Family ◽  
Rolling Circle Mechanism

Members of the family Plectroviridae produce particles that are non-enveloped rigid rods (70–280×10–16 nm). The supercoiled, circular, single-stranded DNA genome of about 4.5–8.3 kb, encodes 4–13 proteins. Viruses of this family infect cell wall-less bacteria, adsorbing to the bacterial surface, replicating their DNA by a rolling-circle mechanism or transposition, and releasing progeny from cells by extrusion, without killing the host. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Plectroviridae which is available at ictv.global/report/plectroviridae.

scholarly journals ICTV Virus Taxonomy Profile: Pospiviroidae

2020 ◽  
Author(s):  
Francesco Di Serio ◽  
Robert A. Owens ◽  
Shi-Fang Li ◽  
Jaroslav Matoušek ◽  
Vicente Pallás ◽  
...  
Keyword(s):  
Circular Rna ◽  
Virus Taxonomy ◽  
Hammerhead Ribozymes ◽  
Rolling Circle ◽  
Link Type ◽  
The Family ◽  
Rolling Circle Mechanism ◽  
Conserved Region

Members of the family Pospiviroidae have single-stranded circular RNA genomes that adopt a rod-like or a quasi-rod-like conformation. These genomes contain a central conserved region that is involved in replication in the nucleus through an asymmetric RNA–RNA rolling-circle mechanism. Members of the family Pospiviroidae lack the hammerhead ribozymes that are typical of viroids classified in the family Avsunviroidae. The family Pospiviroidae includes the genera Apscaviroid, Cocadviroid, Coleviroid, Hostuviroid and Pospiviroid, with >25 species. This is a summary of the ICTV Report on the family Pospiviroidae, which is available at ictv.global/report/pospiviroidae.

scholarly journals ICTV Virus Taxonomy Profile: Solemoviridae 2021

2021 ◽  
Vol 102 (12) ◽  
Author(s):  
Merike Sõmera ◽  
Denis Fargette ◽  
Eugénie Hébrard ◽  
Cecilia Sarmiento ◽  
Keyword(s):  
Host Range ◽  
Vegetative Propagation ◽  
International Committee ◽  
Insect Vectors ◽  
Virus Taxonomy ◽  
Mechanical Wounding ◽  
Narrow Host Range ◽  
The Family ◽  
Positive Sense ◽  
Polycistronic Rna

The family Solemoviridae includes viruses with icosahedral particles (26–34 nm in diameter) assembled on T=3 symmetry with a 4–6 kb positive-sense, monopartite, polycistronic RNA genome. Transmission of members of the genera Sobemovirus and Polemovirus occurs via mechanical wounding, vegetative propagation, insect vectors or abiotically through soil; members of the genera Polerovirus and Enamovirus are transmitted by specific aphids. Most solemoviruses have a narrow host range. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Solemoviridae, which is available at ictv.global/report/solemoviridae.

scholarly journals ICTV Virus Taxonomy Profile: Arteriviridae 2021

2021 ◽  
Vol 102 (8) ◽  
Author(s):  
Margo A. Brinton ◽  
Anastasia A. Gulyaeva ◽  
Udeni B. R. Balasuriya ◽  
Magda Dunowska ◽  
Kay S. Faaberg ◽  
...  
Keyword(s):  
Rna Viruses ◽  
Viral Proteins ◽  
International Committee ◽  
Wild Rodents ◽  
Virus Taxonomy ◽  
Independent Manner ◽  
The Family ◽  
Positive Sense ◽  
Median Diameter ◽  
Overt Disease

The family Arteriviridae comprises enveloped RNA viruses with a linear, positive-sense genome of approximately 12.7 to 15.7 kb. The spherical, pleomorphic virions have a median diameter of 50–74 nm and include eight to eleven viral proteins. Arteriviruses infect non-human mammals in a vector-independent manner. Infections are often persistent and can either be asymptomatic or produce overt disease. Some arteriviruses are important veterinary pathogens while others infect particular species of wild rodents or African non-human primates. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Arteriviridae, which is available at ictv.global/report/arteriviridae.

scholarly journals ICTV Virus Taxonomy Profile: Marnaviridae 2021

2021 ◽  
Vol 102 (8) ◽  
Author(s):  
Andrew S. Lang ◽  
Marli Vlok ◽  
Alexander I. Culley ◽  
Curtis A. Suttle ◽  
Yoshitake Takao ◽  
...  
Keyword(s):  
International Committee ◽  
Virus Taxonomy ◽  
Enveloped Viruses ◽  
Link Type ◽  
The Family ◽  
Positive Sense ◽  
Freshwater Environments

The family Marnaviridae comprises small non-enveloped viruses with positive-sense RNA genomes of 8.6–9.6 kb. Isolates infect marine single-celled eukaryotes (protists) that come from diverse lineages. Some members are known from metagenomic studies of ocean virioplankton, with additional unclassified viruses described from metagenomic datasets derived from marine and freshwater environments. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Marnaviridae, which is available at ictv.global/report/marnaviridae.

scholarly journals ICTV Virus Taxonomy Profile: Roniviridae

2020 ◽  
Author(s):  
Walker P. J. ◽  
Cowley J. A. ◽  
Dong X. ◽  
Huang J. ◽  
Moody N. ◽  
...  
Keyword(s):  
International Committee ◽  
Open Reading Frames ◽  
Virus Taxonomy ◽  
Highly Pathogenic ◽  
Ribosomal Frameshifting ◽  
Yellow Head Virus ◽  
The Family ◽  
Positive Sense ◽  
Membrane Spanning ◽  
Reading Frames

The family Roniviridae includes the genus Okavirus for three species of viruses with enveloped, rod-shaped virions. The monopartite, positive-sense ssRNA genome (26–27 kb) contains five canonical long open reading frames (ORFs). ORF1a encodes polyprotein pp1a containing proteinase domains. ORF1b is expressed as a large polyprotein pp1ab by ribosomal frameshifting from ORF1a and encodes replication enzymes. ORF2 encodes the nucleoprotein. ORF3 encodes two envelope glycoproteins. ORFX encodes a putative double membrane-spanning protein. Roniviruses infect shrimp but only yellow head virus is highly pathogenic. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Roniviridae, which is available at ictv.global/report/roniviridae.

scholarly journals ICTV Virus Taxonomy Profile: Ovaliviridae

2020 ◽  
Author(s):  
Li Huang ◽  
Haina Wang ◽  
Keyword(s):  
Viral Genome ◽  
International Committee ◽  
Virus Taxonomy ◽  
Enveloped Viruses ◽  
Content Type ◽  
Link Type ◽  
The Family ◽  
Virus Progeny ◽  
Linear Dsdna ◽  
Infected Cells

Ovaliviridae is a family of enveloped viruses with a linear dsDNA genome. The virions are ellipsoidal, and contain a multi-layered spool-like capsid. The viral genome is presumably replicated through protein priming by a putative DNA polymerase encoded by the virus. Progeny virions are released through hexagonal openings resulting from the rupture of virus-associated pyramids formed on the surface of infected cells. The only known host is a hyperthermophilic archaeon of the genus Sulfolobus . This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Ovaliviridae, which is available at ictv.global/report/ovaliviridae.

scholarly journals ICTV Virus Taxonomy Profile: Redondoviridae

2020 ◽  
Author(s):  
Arwa Abbas ◽  
Louis J. Taylor ◽  
Ronald G. Collman ◽  
Frederic D. Bushman ◽  
Keyword(s):  
Critical Illness ◽  
Causative Agent ◽  
Human Subjects ◽  
International Committee ◽  
Open Reading Frames ◽  
Metagenomic Sequencing ◽  
Virus Taxonomy ◽  
Single Stranded Dna ◽  
The Family ◽  
Reading Frames

Viruses in the family Redondoviridae have a circular genome of 3.0 kb with three open reading frames. The packaged genome is inferred to be single-stranded DNA by analogy to related viruses. Redondoviruses were discovered through metagenomic sequencing methods in samples from human subjects and are inferred to replicate in humans. Evidence of redondovirus infection is associated with periodontitis and critical illness, but redondoviruses have not been shown to be the causative agent of any diseases. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Redondoviridae, which is available at ictv.global/report/redondoviridae.

scholarly journals ICTV Virus Taxonomy Profile: Retroviridae 2021

2021 ◽  
Vol 102 (12) ◽  
Author(s):  
John Coffin ◽  
Jonas Blomberg ◽  
Hung Fan ◽  
Robert Gifford ◽  
Theodora Hatziioannou ◽  
...  
Keyword(s):  
Host Cell ◽  
Reverse Transcription ◽  
Viral Genome ◽  
Inner Core ◽  
Endogenous Retrovirus ◽  
International Committee ◽  
Virus Taxonomy ◽  
The Family ◽  
Vertebrate Hosts ◽  
Provirus Integration

Viruses in the family Retroviridae are found in a wide variety of vertebrate hosts. Enveloped virions are 80–100 nm in diameter with an inner core containing the viral genome and replicative enzymes. Core morphology is often characteristic for viruses within the same genus. Replication involves reverse transcription and integration into host cell DNA, resulting in a provirus. Integration into germline cells can result in a heritable provirus known as an endogenous retrovirus. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Retroviridae, which is available at ictv.global/report/retroviridae.

scholarly journals ICTV Virus Taxonomy Profile: Bornaviridae

2021 ◽  
Vol 102 (7) ◽  
Author(s):  
Dennis Rubbenstroth ◽  
Thomas Briese ◽  
Ralf Dürrwald ◽  
Masayuki Horie (堀江真行) ◽  
Timothy H. Hyndman ◽  
...  
Keyword(s):  
Public Health ◽  
Disease Virus ◽  
International Committee ◽  
Virus Taxonomy ◽  
Borna Disease Virus ◽  
Link Type ◽  
The Family ◽  
Rna Genome ◽  
Negative Sense ◽  
Borna Disease

Members of the family Bornaviridae produce enveloped virions containing a linear negative-sense non-segmented RNA genome of about 9 kb. Bornaviruses are found in mammals, birds, reptiles and fish. The most-studied viruses with public health and veterinary impact are Borna disease virus 1 and variegated squirrel bornavirus 1, both of which cause fatal encephalitis in humans. Several orthobornaviruses cause neurological and intestinal disorders in birds, mostly parrots. Endogenous bornavirus-like sequences occur in the genomes of various animals. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Bornaviridae, which is available at ictv.global/report/bornaviridae.

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