scholarly journals Extensive phenotypic plasticity in a seasonal butterfly limits potential for evolutionary responses to environmental change

2017 ◽  
Author(s):  
Vicencio Oostra ◽  
Marjo Saastamoinen ◽  
Bas J. Zwaan ◽  
Christopher Wheat
Keyword(s):  
Climate Change ◽  
Phenotypic Plasticity ◽  
Environmental Change ◽  
Evolutionary Biology ◽  
Purifying Selection ◽  
Evolutionary Potential ◽  
Seasonal Plasticity ◽  
Multiple Phenotypes ◽  
A Genome ◽  
Population Genetic Variation

AbstractUnderstanding how populations adapt to changing environments is a major goal in evolutionary biology and ecology, and particularly urgent for predicting resilience to climate change. Phenotypic plasticity, the ability to express multiple phenotypes from the same genome, is a widespread adaptation to short-term environmental fluctuations, but whether it facilitates adaptation to environmental change on evolutionary timescales, such as those under climate change, remains contentious. Here, we investigate plasticity and adaptive potential in an African savannah butterfly displaying extensive plasticity as adaptation to predictable dry-wet seasonality. We assess the transcriptional architecture of seasonal plasticity and find pervasive gene expression differences between the seasonal phenotypes, reflecting a genome-wide plasticity programme. Strikingly, intra-population genetic variation for this response is highly depleted, possibly reflecting strong purifying selection in its savannah habitat where an environmental cue (temperature) reliably predicts seasonal transitions and the cost of a mismatched phenotype is high. Under climate change the accuracy of such cues may deteriorate, rendering dominant reactions norm maladaptive. Therefore, depleted variation for plasticity as reported here may crucially limit evolutionary potential when conditions change, and seasonally plastic species may in fact be especially vulnerable to climate change.

scholarly journals Genomic signature of shifts in selection in a sub-alpine ant and its physiological adaptations

2019 ◽  
Author(s):  
Francesco Cicconardi ◽  
Patrick Krapf ◽  
Ilda D’Annessa ◽  
Alexander Gamisch ◽  
Herbert C Wagner ◽  
...  
Keyword(s):  
High Altitude ◽  
Evolutionary Biology ◽  
Extreme Environments ◽  
Purifying Selection ◽  
High Elevation ◽  
Protein Coding ◽  
Strong Shift ◽  
Genomic Signatures ◽  
A Genome ◽  
Shock Proteins

AbstractUnderstanding how organisms adapt to extreme environments is fundamental and can provide insightful case studies for both evolutionary biology and climate-change biology. Here, we take advantage of the vast diversity of lifestyles in ants to identify genomic signatures of adaptation to extreme habitats such as high altitude. We hypothesised two parallel patterns would occur in a genome adapting to an extreme habitat: i) strong positive selection on genes related to adaptation and, ii) a relaxation of previous purifying selection. We tested this hypothesis by sequencing the high-elevation specialist Tetramorium alpestre and four other phylogenetic related species. In support of our hypothesis, we recorded a strong shift of selective forces in T. alpestre, in particular a stronger magnitude of diversifying and relaxed selection when compared to all other ants. We further disentangled candidate molecular adaptations in both gene expression and protein-coding sequence that were identified by our genome-wide analyses. In particular, we demonstrate that T. alpestre has i) a derived level of expression for stv and other heat-shock proteins in chill shock tests, and ii) enzymatic enhancement of Hex-T1, a rate-limiting regulatory enzyme that controls the entry of glucose into the glycolytic pathway. Together, our analyses highlight the adaptive molecular changes that support colonisation of high-altitude environments.

scholarly journals Hedgehog signaling is necessary and sufficient to mediate craniofacial plasticity in teleosts

2020 ◽  
Vol 117 (32) ◽  
pp. 19321-19327 ◽  
Author(s):  
Dina Navon ◽  
Ira Male ◽  
Emily R. Tetrault ◽  
Benjamin Aaronson ◽  
Rolf O. Karlstrom ◽  
...  
Keyword(s):  
Phenotypic Plasticity ◽  
Hedgehog Signaling ◽  
Tissue Level ◽  
Transgenic Zebrafish ◽  
Evolutionary Divergence ◽  
Feeding Apparatus ◽  
Evolutionary Potential ◽  
Cichlid Species ◽  
Multiple Phenotypes ◽  
Bone Deposition

Phenotypic plasticity, the ability of a single genotype to produce multiple phenotypes under different environmental conditions, is critical for the origins and maintenance of biodiversity; however, the genetic mechanisms underlying plasticity as well as how variation in those mechanisms can drive evolutionary change remain poorly understood. Here, we examine the cichlid feeding apparatus, an icon of both prodigious evolutionary divergence and adaptive phenotypic plasticity. We first provide a tissue-level mechanism for plasticity in craniofacial shape by measuring rates of bone deposition within functionally salient elements of the feeding apparatus in fishes forced to employ alternate foraging modes. We show that levels and patterns of phenotypic plasticity are distinct among closely related cichlid species, underscoring the evolutionary potential of this trait. Next, we demonstrate that hedgehog (Hh) signaling, which has been implicated in the evolutionary divergence of cichlid feeding architecture, is associated with environmentally induced rates of bone deposition. Finally, to demonstrate that Hh levels are the cause of the plastic response and not simply the consequence of producing more bone, we use transgenic zebrafish in which Hh levels could be experimentally manipulated under different foraging conditions. Notably, we find that the ability to modulate bone deposition rates in different environments is dampened when Hh levels are reduced, whereas the sensitivity of bone deposition to different mechanical demands increases with elevated Hh levels. These data advance a mechanistic understanding of phenotypic plasticity in the teleost feeding apparatus and in doing so contribute key insights into the origins of adaptive morphological radiations.

scholarly journals Genomic Signature of Shifts in Selection in a Subalpine Ant and Its Physiological Adaptations

2020 ◽  
Vol 37 (8) ◽  
pp. 2211-2227
Author(s):  
Francesco Cicconardi ◽  
Patrick Krapf ◽  
Ilda D’Annessa ◽  
Alexander Gamisch ◽  
Herbert C Wagner ◽  
...  
Keyword(s):  
High Altitude ◽  
Evolutionary Biology ◽  
Extreme Environments ◽  
Purifying Selection ◽  
High Elevation ◽  
Protein Coding ◽  
Strong Shift ◽  
Genomic Signatures ◽  
A Genome ◽  
Shock Proteins

Abstract Understanding how organisms adapt to extreme environments is fundamental and can provide insightful case studies for both evolutionary biology and climate-change biology. Here, we take advantage of the vast diversity of lifestyles in ants to identify genomic signatures of adaptation to extreme habitats such as high altitude. We hypothesized two parallel patterns would occur in a genome adapting to an extreme habitat: 1) strong positive selection on genes related to adaptation and 2) a relaxation of previous purifying selection. We tested this hypothesis by sequencing the high-elevation specialist Tetramorium alpestre and four other phylogenetically related species. In support of our hypothesis, we recorded a strong shift of selective forces in T. alpestre, in particular a stronger magnitude of diversifying and relaxed selection when compared with all other ants. We further disentangled candidate molecular adaptations in both gene expression and protein-coding sequence that were identified by our genome-wide analyses. In particular, we demonstrate that T. alpestre has 1) a higher level of expression for stv and other heat-shock proteins in chill-shock tests and 2) enzymatic enhancement of Hex-T1, a rate-limiting regulatory enzyme that controls the entry of glucose into the glycolytic pathway. Together, our analyses highlight the adaptive molecular changes that support colonization of high-altitude environments.

Phenotypic plasticity

2018 ◽  
Author(s):  
Karen D. Williams ◽  
Marla B. Sokolowski
Keyword(s):  
Gene Expression ◽  
Phenotypic Plasticity ◽  
Environmental Change ◽  
Behavioral Plasticity ◽  
Behavioral Flexibility ◽  
Insect Behavior ◽  
Behavioral Variability ◽  
Gene By Environment Interactions ◽  
Affect Gene Expression

Why is there so much variation in insect behavior? This chapter will address the sources of behavioral variability, with a particular focus on phenotypic plasticity. Variation in social, nutritional, and seasonal environmental contexts during development and adulthood can give rise to phenotypic plasticity. To delve into mechanism underlying behavioral flexibility in insects, examples of polyphenisms, a type of phenotypic plasticity, will be discussed. Selected examples reveal that environmental change can affect gene expression, which in turn can affect behavioral plasticity. These changes in gene expression together with gene-by-environment interactions are discussed to illuminate our understanding of insect behavioral plasticity.

scholarly journals Turbid Coral Reefs: Past, Present and Future—A Review

Diversity ◽  
2021 ◽  
Vol 13 (6) ◽  
pp. 251
Author(s):  
Adi Zweifler (Zvifler) ◽  
Michael O’Leary ◽  
Kyle Morgan ◽  
Nicola K. Browne
Keyword(s):  
Climate Change ◽  
Coral Reef ◽  
Coral Reefs ◽  
Environmental Change ◽  
Scientific Literature ◽  
Conservation Status ◽  
Climate Change Impacts ◽  
Geographic Range ◽  
Reef Complex ◽  
Sediment Input

Increasing evidence suggests that coral reefs exposed to elevated turbidity may be more resilient to climate change impacts and serve as an important conservation hotspot. However, logistical difficulties in studying turbid environments have led to poor representation of these reef types within the scientific literature, with studies using different methods and definitions to characterize turbid reefs. Here we review the geological origins and growth histories of turbid reefs from the Holocene (past), their current ecological and environmental states (present), and their potential responses and resilience to increasing local and global pressures (future). We classify turbid reefs using new descriptors based on their turbidity regime (persistent, fluctuating, transitional) and sources of sediment input (natural versus anthropogenic). Further, by comparing the composition, function and resilience of two of the most studied turbid reefs, Paluma Shoals Reef Complex, Australia (natural turbidity) and Singapore reefs (anthropogenic turbidity), we found them to be two distinct types of turbid reefs with different conservation status. As the geographic range of turbid reefs is expected to increase due to local and global stressors, improving our understanding of their responses to environmental change will be central to global coral reef conservation efforts.

scholarly journals Transcriptome Expression of Biomineralization Genes in Littoraria flava Gastropod in Brazilian Rocky Shore Reveals Evidence of Local Adaptation

2021 ◽  
Vol 13 (4) ◽  
Author(s):  
Camilla A Santos ◽  
Gabriel G Sonoda ◽  
Thainá Cortez ◽  
Luiz L Coutinho ◽  
Sónia C S Andrade
Keyword(s):  
Local Adaptation ◽  
Differentially Expressed Genes ◽  
Evolutionary Biology ◽  
Rocky Shore ◽  
Expression Patterns ◽  
Purifying Selection ◽  
Marine Species ◽  
Differentially Expressed ◽  
Planktonic Larva ◽  
Structure Changes

Abstract Understanding how selection shapes population differentiation and local adaptation in marine species remains one of the greatest challenges in the field of evolutionary biology. The selection of genes in response to environment-specific factors and microenvironmental variation often results in chaotic genetic patchiness, which is commonly observed in rocky shore organisms. To identify these genes, the expression profile of the marine gastropod Littoraria flava collected from four Southeast Brazilian locations in ten rocky shore sites was analyzed. In this first L. flava transcriptome, 250,641 unigenes were generated, and 24% returned hits after functional annotation. Independent paired comparisons between 1) transects, 2) sites within transects, and 3) sites from different transects were performed for differential expression, detecting 8,622 unique differentially expressed genes. Araçá (AR) and São João (SJ) transect comparisons showed the most divergent gene products. For local adaptation, fitness-related differentially expressed genes were chosen for selection tests. Nine and 24 genes under adaptative and purifying selection, respectively, were most related to biomineralization in AR and chaperones in SJ. The biomineralization-genes perlucin and gigasin-6 were positively selected exclusively in the site toward the open ocean in AR, with sequence variants leading to pronounced protein structure changes. Despite an intense gene flow among L. flava populations due to its planktonic larva, gene expression patterns within transects may be the result of selective pressures. Our findings represent the first step in understanding how microenvironmental genetic variation is maintained in rocky shore populations and the mechanisms underlying local adaptation in marine species.

scholarly journals The Impact of Different Environmental Conditions during Vegetative Propagation on Growth, Survival, and Biochemical Characteristics in Populus Hybrids in Clonal Field Trial

Forests ◽  
2021 ◽  
Vol 12 (7) ◽  
pp. 892
Author(s):  
Valda Gudynaitė-Franckevičienė ◽  
Alfas Pliūra
Keyword(s):  
Climate Change ◽  
Phenotypic Plasticity ◽  
Environmental Conditions ◽  
Vegetative Propagation ◽  
Genotypic Variation ◽  
Hybrid Poplar ◽  
Field Trials ◽  
Biochemical Traits ◽  
Suburban Areas ◽  
Growing Conditions

To have a cleaner environment, good well-being, and improve the health of citizens it is necessary to expand green urban and suburban areas using productive and adapted material of tree species. The quality of urban greenery, resistance to negative climate change factors and pollution, as well as efficiency of short-rotation forestry in suburban areas, depends primarily on the selection of hybrids and clones, suitable for the local environmental conditions. We postulate that ecogenetic response, phenotypic plasticity, and genotypic variation of hybrid poplars (Populus L.) grown in plantations are affected not only by the peculiarities of hybrids and clones, but also by environmental conditions of their vegetative propagation. The aim of the present study was to estimate growth and biochemical responses, the phenotypic plasticity, genotypic variation of adaptive traits, and genetically regulated adaptability of Populus hybrids in field trials which may be predisposed by the simulated contrasting temperature conditions at their vegetative propagation phase. The research was performed with the 20 cultivars and experimental clones of one intraspecific cross and four different interspecific hybrids of poplars propagated under six contrasting temperature regimes in phytotron. The results suggest that certain environmental conditions during vegetative propagation not only have a short-term effect on tree viability and growth, but also can help to adapt to climate change conditions and grow successfully in the long-term. It was found that tree growth and biochemical traits (the chlorophyll A and B, pigments content and the chlorophyll A/B ratio) of hybrid poplar clones grown in field trials, as well as their traits’ genetic parameters, were affected by the rooting-growing conditions during vegetative propagation phase. Hybrids P. balsamifera × P. trichocarpa, and P. trichocarpa × P. trichocarpa have shown the most substantial changes of biochemical traits across vegetative propagation treatments in field trial. Rooting-growing conditions during vegetative propagation had also an impact on coefficients of genotypic variation and heritability in hybrid poplar clones when grown in field trials.

Evidence of river flow regulation loss over time in the Magdalena river basin 

2021 ◽  
Author(s):  
Diver E. Marín ◽  
Juan F. Salazar ◽  
José A. Posada-Marín
Keyword(s):  
Climate Change ◽  
Environmental Change ◽  
River Basin ◽  
River Flow ◽  
Southern Oscillation ◽  
Scaling Theory ◽  
Scaling Properties ◽  
Low Flows ◽  
High Flows ◽  
Magdalena River

<p>Some of the main problems in hydrological sciences are related to how and why river flows change as a result of environmental change, and what are the corresponding implications for society. This has been described as the Panta Rhei context, which refers to the challenge of understanding and quantifying hydrological dynamics in a changing environment, i.e. under the influence of non-stationary effects. The river flow regime in a basin is the result of a complex aggregation process that has been studied by the scaling theory, which allows river basins to be classified as regulated or unregulated and to identify a critical threshold between these states. Regulation is defined here as the basin’s capacity to either dampen high flows or to enhance low flows. This capacity depends on how basins store and release water through time, which in turn depends on many processes that are highly dynamic and sensitive to environmental change. Here we focus on the Magdalena river basin in northwestern South America, which is the main basin for water and energy security in Colombia, and at the same time, it has been identified as one of the most vulnerable regions to be affected by climate change. Building upon some of our previous studies, here we use data analysis to study the evolution of regulation in the Magdalena basin for 1992-2015 based on the scaling theory for extreme flows. In contrast to most previous studies, here we focus on the scaling properties of events rather than on long term averages. We discuss possible relations between changes in the scaling properties and environmental factors such as climate variability, climate change, and land use/land cover change, as well as the potential implications for water security in the country. Our results show that, during the last few decades, the Magdalena river basin has maintained its capacity to regulate low flows (i.e. amplification) whereas it has been losing its capacity to regulate high flows (i.e. dampening), which could be associated with the occurrence of the extremes phases of  El Niño Southern Oscillation (ENSO) and anthropogenic effects, mainly deforestation. These results provide foundations for using the scaling laws as empirical tools for understanding temporal changes of hydrological regulation and simultaneously generate useful scientific evidence that allows stakeholders to take decisions related to water management in the Magdalena river basin in the context of environmental change.</p>

Neurobiology of phenotypic plasticity in the light of climate change

Neuroforum ◽  
2021 ◽  
Vol 0 (0) ◽  
Author(s):  
Linda C. Weiss
Keyword(s):  
Climate Change ◽  
Phenotypic Plasticity ◽  
Sensory Systems ◽  
Chemical Information ◽  
Adaptive Potential ◽  
Worst Case ◽  
Changing Environments ◽  
Neuronal Signalling ◽  
Physiological Adaptations ◽  
Signalling Cascade

Abstract Phenotypic plasticity describes the ability of an organism with a given genotype to respond to changing environmental conditions through the adaptation of the phenotype. Phenotypic plasticity is a widespread means of adaptation, allowing organisms to optimize fitness levels in changing environments. A core prerequisite for adaptive predictive plasticity is the existence of reliable cues, i.e. accurate environmental information about future selection on the expressed plastic phenotype. Furthermore, organisms need the capacity to detect and interpret such cues, relying on specific sensory signalling and neuronal cascades. Subsequent neurohormonal changes lead to the transformation of phenotype A into phenotype B. Each of these activities is critical for survival. Consequently, anything that could impair an animal’s ability to perceive important chemical information could have significant ecological ramifications. Climate change and other human stressors can act on individual or all of the components of this signalling cascade. In consequence, organisms could lose their adaptive potential, or in the worst case, even become maladapted. Therefore, it is key to understand the sensory systems, the neurobiology and the physiological adaptations that mediate organisms’ interactions with their environment. It is, thus, pivotal to predict the ecosystem-wide effects of global human forcing. This review summarizes current insights on how climate change affects phenotypic plasticity, focussing on how associated stressors change the signalling agents, the sensory systems, receptor responses and neuronal signalling cascades, thereby, impairing phenotypic adaptations.

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