scholarly journals Western Amazon was a center of Neotropical fish dispersal, as evidenced by the continental-wide time-stratified biogeographic analysis of the hyper-diverse Hypostomus catfish

2021 ◽  
Author(s):  
Luiz Jardim de Queiroz ◽  
Xavier Meyer ◽  
Yamila P. Cardoso ◽  
Ilham A. Bahechar ◽  
Raphael Covain ◽  
...  
Keyword(s):  
Habitat Preference ◽  
Amazon Basin ◽  
Species Coexistence ◽  
Primary Source ◽  
Neotropical Region ◽  
Small Rivers ◽  
Running Waters ◽  
Neotropical Fish ◽  
Biogeographic History ◽  
Fish Dispersal

The Amazon is probably the most diverse realm on Earth, and is considered to be the primary source of diversity and a center of dispersal for Neotropical terrestrial organisms. Yet, the assumption that the Amazon basin is a primordial place of fish species origination and dispersal into other drainages still need to be tested. We addressed this issue by inferring a time-stratified biogeographic history and reconstructing the ancestral habitat preference of Hypostomus, a continentally widespread and species-rich Neotropical genus. We found that Hypostomus emerged in the Western Amazon (~14.7 Ma), when the Western Amazon River was flowing northwards and disconnected from the Eastern Amazon. We show that dispersal events in the first half of Hypostomus evolution occurred from the Western Amazon into adjacent basins, initiating its Neotropical radiation. The ancestral preferred habitat consisted in small rivers with running waters, a predominant habitat in river headwaters. Because of strong niche conservatism in the early evolution of Hypostomus, we suggest that most of the out-of-Western-Amazon dispersal occurred via headwater captures. The radiation of Hypostomus was further promoted by major reconfigurations of river basins, which opened dispersal opportunities into new drainages. Diversification in habitat preference coincided with colonization of basins already occupied by congenerics, indicative of niche shifts triggered by inter-specific competition and species coexistence. By analyzing the evolutionary history of Hypostomus, we show that Western Amazon was the main center of fish dispersal in the Neotropical Region from Middle Miocene to the present, supporting the cradle hypothesis of fish origination and dispersal.

scholarly journals Amazonia as the Origin and Diversification Area of Didelphidae (Mammalia: Metatheria), and a Review of the Fossil Record of the Clade

2021 ◽  
Author(s):  
Mariela C. Castro ◽  
Murilo J. Dahur ◽  
Gabriel S. Ferreira
Keyword(s):  
South America ◽  
Amazon Basin ◽  
Parametric Models ◽  
Isthmus Of Panama ◽  
Biogeographic History ◽  
Early Diversification ◽  
Northern Portion ◽  
History Of ◽  
Environmental Events ◽  
Fossil Records

AbstractDidelphidae is the largest New World radiation of marsupials, and is mostly represented by arboreal, small- to medium-sized taxa that inhabit tropical and/or subtropical forests. The group originated and remained isolated in South America for millions of years, until the formation of the Isthmus of Panama. In this study, we present the first reconstruction of the biogeographic history of Didelphidae including all major clades, based on parametric models and stratified analyses over time. We also compiled all the pre-Quaternary fossil records of the group, and contrasted these data to our biogeographic inferences, as well as to major environmental events that occurred in the South American Cenozoic. Our results indicate the relevance of Amazonia in the early diversification of Didelphidae, including the divergence of the major clades traditionally ranked as subfamilies and tribes. Cladogeneses in other areas started in the late Miocene, an interval of intense shifts, especially in the northern portion of Andes and Amazon Basin. Occupation of other areas continued through the Pliocene, but few were only colonized in Quaternary times. The comparison between the biogeographic inference and the fossil records highlights some further steps towards better understanding the spatiotemporal evolution of the clade. Finally, our results stress that the early history of didelphids is obscured by the lack of Paleogene fossils, which are still to be unearthed from low-latitude deposits of South America.

scholarly journals Dietary tissue cadmium accumulation in an amazonian teleost (Tambaqui, Colossoma macropomum Cuvier, 1818)

2007 ◽  
Vol 67 (4) ◽  
pp. 657-661 ◽  
Author(s):  
AYO. Matsuo ◽  
AL. Val
Keyword(s):  
Amazon Basin ◽  
Graphite Furnace ◽  
Primary Source ◽  
Cadmium Accumulation ◽  
Atomic Absorption Spectrophotometry ◽  
Colossoma Macropomum ◽  
Feeding Trials ◽  
Dry Food ◽  
Dietary Cadmium ◽  
The City

Understanding the effects of metal contamination in the Amazon basin is important because of the potential impact on this region of high biodiversity. In addition, the significance of fish as the primary source of protein for the local human population (living either alongside the Amazon River or in the city of Manaus) highlights the need for information on the metal transfer through the food chain. Bioaccumulation of metals in fish can occur at significant rates through the dietary route, without necessarily resulting in death of the organism. The goal of this work was to expose an economic relevant species from the Amazon basin (tambaqui, Colossoma macropomum) to dietary cadmium (Cd) at concentrations of 0, 50, 100, 200, and 400 µg.g-1 dry food. Fish were sampled on days 15, 30, and 45 of the feeding trials. Tissues were collected for analysis of Cd concentration using graphite furnace atomic absorption spectrophotometry. Cd accumulation in the tissues occurred in the following order: kidney > liver > gills > muscle. Relative to other freshwater fish (e.g., rainbow trout, tilapia), tambaqui accumulated remarkably high levels of Cd in their tissues. Although Cd is known to affect Ca2+ homeostasis, no mortality or growth impairment occurred during feeding trials.

scholarly journals Evolution of Philodendron (Araceae) species along Neotropical biomes

2016 ◽  
Author(s):  
Leticia Loss-Oliveira ◽  
Cassia CMS Sakuragui ◽  
Maria de Lourdes Soares ◽  
Carlos G Schrago
Keyword(s):  
Morphological Diversity ◽  
Neotropical Region ◽  
Last Common Ancestor ◽  
Amazon Forest ◽  
Ancestral Reconstruction ◽  
Biogeographic History ◽  
Early Diversification ◽  
Sister Clade ◽  
History Of ◽  
Wide Geographic Distribution

Philodendron is the second most diverse genus of the Araceae, a tropical monocot family with significant morphological diversity along its wide geographic distribution in the Neotropics. Although evolutionary studies of Philodendron were conducted in recent years, the phylogenetic relationship among its species remains unclear. Additionally, analyses conducted to date suggested the inclusion of all American representatives of a closely related genus, Homalomena, within the Philodendron clade. A thorough evaluation of the phylogeny and timescale of these lineages is thus necessary to elucidate the tempo and mode of evolution of this large Neotropical genus and to unveil the biogeographic history of Philodendron evolution along the Amazonian and Atlantic Rain Forests, as well as open dry forests of South America. To this end, we have estimated the molecular phylogeny for 68 Philodendron species, which consists of the largest sampling assembled to date aiming the study of the evolutionary affinities. We have also performed ancestral reconstruction of species distribution along biomes. Finally, we contrasted these results with the inferred timescale of Philodendron and Homalomena lineage diversification. Our estimates indicate that American Homalomena is the sister clade to Philodendron. The early diversification of Philodendron took place in the Amazon Forest from Early to Middle Miocene, followed by colonization of the Atlantic Forest and the savanna-like landscapes, respectively. Based on the age of the last common ancestor of Philodendron, the species of this genus diversified by rapid radiations, leading to its wide extant distribution in the Neotropical region.

scholarly journals First record and extended distribution of Otothyropsis piribebuy (Loricariidae: Hypoptopomatinae) in Brazil

2020 ◽  
Vol 60 ◽  
pp. e20206021
Author(s):  
Guilherme Seiji Hocama ◽  
Fernanda De Oliveira Martins ◽  
Francisco Severo-Neto
Keyword(s):  
Principal Component Analysis ◽  
Maximum Entropy ◽  
Principal Component ◽  
Original Description ◽  
First Record ◽  
Neotropical Region ◽  
Correct Identification ◽  
Neotropical Fish ◽  
Essential Step ◽  
Benthic Fishes

Cascudinhos are a group of small benthic fishes included in the Hypoptopomatinae subfamily, inhabiting small to moderate streams and rivers within the Neotropical region, from Venezuela to Northern Argentina. Until now, Otothyropsis piribebuy originally described from the rio Paraguay basin, in Paraguay, is the only species of the genus not recorded in Brazil. Recent samples in the rio Tererê, rio Paraguay basin, Brazil, revealed a population of Otothyropsis with uncertain taxonomic identity. Therefore, the study aimed to unveil the distribution of Otothyropsis within Brazilian territory. External morphology, osteology, measurements, and counts (plates, teeth, and rays) of these specimens from rio Tererê were compared to data from the original description of O. piribebuy, and also with specimens of O. piribebuy sampled in Paraguayan territory. Observations indicated no differences among the analyzed specimens. Furthermore, a Principal Component Analysis (PCA), carried out using log-transformed measures from Brazilian and Paraguayan specimens, showed no separation of these populations, also indicating that all analyzed specimens pertain to the same species. Based on this, a prediction map of distribution, using Maximum Entropy, was produced. The correct identification of spatial range of occurrence is an essential step to ensure the conservation of species, and the extended distribution of Otothyropsis piribebuy was confirmed, enhancing the list of neotropical fish from Brazil.

scholarly journals Short communication: First record of Arapaima gigas (Schinz, 1822) (Teleostei: Osteoglossomorpha), in the Brantas River, Sidoarjo, East Java, Indonesia

2019 ◽  
Vol 20 (12) ◽  
Author(s):  
Mohamad Fadjar ◽  
R Adharyan Islamy ◽  
Endang Yuli Herawati
Keyword(s):  
River Basin ◽  
Native Species ◽  
Amazon Basin ◽  
Short Communication ◽  
First Record ◽  
Neotropical Region ◽  
In Situ Observation ◽  
Air Breathing ◽  
Arapaima Gigas ◽  
Live Specimen

Abstract. Fadjar M, Islamy RA, Herawati EY. 2019. Short communication: First record of Arapaima gigas (Schinz, 1822) (Teleostei: Osteoglossomorpha), in the Brantas River, Sidoarjo, East Java, Indonesia. Biodiversitas 20: 3527-3531. The arapaima (= Arapaima gigas) is the largest freshwater fish in the Neotropical region, obligate air-breathing fish that known to reach up to 3 m - 3.90 m in length and 200 kg in weight endemic to the Amazon basin. Arapaima gigas is giant osteoglossomorph and obligate air‐breathing fish and also a native species of the Amazon basin. We present the first record of Arapaima gigas (Schinz, 1822) in Brantas River, Sidoarjo, East Java, Indonesia with diagnostic meristic and morphometrics of the specimens analyzed following Stewart method. Herein, it recorded from the Brantas River basin. This record based on the finding of one live specimen on the tributary of Brantas River basin, and in situ observation of juveniles and adults in the river).

scholarly journals Distribution patterns of Neotropical primates (Platyrrhini) based on Parsimony Analysis of Endemicity

2006 ◽  
Vol 66 (1a) ◽  
pp. 61-74 ◽  
Author(s):  
A. Goldani ◽  
G. S. Carvalho ◽  
J. C. Bicca-Marques
Keyword(s):  
South America ◽  
Central America ◽  
Amazon Basin ◽  
Distribution Patterns ◽  
Neotropical Region ◽  
Primate Species ◽  
Parsimony Analysis ◽  
Neotropical Primates ◽  
Areas Of Endemism ◽  
Parsimony Analysis Of Endemicity

The Parsimony Analysis of Endemicity (PAE) is a method of historical biogeography that is used for detecting and connecting areas of endemism. Based on data on the distribution of Neotropical primates, we constructed matrices using quadrats, interfluvial regions and pre-determinated areas of endemism described for avians as Operative Geographic Units (OGUs). We codified the absence of a species from an OGU as 0 (zero) and its presence as 1 (one). A hypothetical area with a complete absence of primate species was used as outgroup to root the trees. All three analyses resulted in similar groupings of areas of endemism, which match the distribution of biomes in the Neotropical region. One area includes Central America and the extreme Northwest of South America, other the Amazon basin, and another the Atlantic Forest, Caatinga, Cerrado and Chaco.

scholarly journals Modeling the Ecological Responses of Tree Species to the Flood Pulse of the Amazon Negro River Floodplains

2021 ◽  
Vol 9 ◽  
Author(s):  
John Ethan Householder ◽  
Jochen Schöngart ◽  
Maria T. F. Piedade ◽  
Wolfgang J. Junk ◽  
Hans ter Steege ◽  
...  
Keyword(s):  
Tree Species ◽  
Amazon Basin ◽  
Species Coexistence ◽  
Experimental Studies ◽  
Flood Pulse ◽  
Forest Composition ◽  
Compositional Variation ◽  
Flood Duration ◽  
Negro River ◽  
Ideal System

The large flood pulse of the Amazon basin is a principal driver of environmental heterogeneity with important implications for ecosystem function and the assembly of natural communities. Understanding species ecological response to the flood pulse is thus a key question with implications for theories of species coexistence, resource management, and conservation. Yet these remain largely undescribed for most species, and in particular for trees. The large flood pulse and high tree diversity of the Negro River floodplain makes it an ideal system to begin filling this knowledge gap. We merged historical hydrologic data with 41 forest inventories under variable flooding conditions distributed across the Negro River basin, comprising a total area of 34 ha, to (i) assess the importance of flood duration as a driver of compositional variation, (ii) model the response curve shapes of 111 of the most frequent tree species in function of flood duration, and (iii) derive their niche properties (optima and tolerance). We found that flood duration is a strong driver of compositional turnover, although the majority site-to-site variation in forest composition still remains unexplained. About 73% of species responded to the flood duration gradient, exhibiting a diversity of shapes, but most frequently skewed. About 29% of species were clearly favored by flood durations >120 days year–1, and 44% of species favored by shorter floods. The median niche breadth was 85 flood days year–1, corresponding to approximately 30% of the flood duration gradient. A significant subset of species (27%) did not respond to flooding, but rather exhibited wide tolerance to the flood gradient. The response models provided here offer valuable information regarding tree species differential capacity to grow, survive, and regenerate along an ecologically important gradient and are spatially valid for the Amazon Negro basin. These attributes make them an appealing tool with wide applicability for field and experimental studies in the region, as well as for vegetation monitoring and simulation models of floodplain forest change in the face of hydrologic alteration.

scholarly journals Description of three new species of frog–biting midges (Diptera: Corethrellidae) from the Central Brazilian Amazon

2021 ◽  
Vol 778 ◽  
pp. 148-166
Author(s):  
Jessica Feijó Almeida ◽  
Amanda Maria Picelli ◽  
Adriane Costa Ramires ◽  
Heliana Christy Matos Belchior ◽  
Eric Fabrício Marialva ◽  
...  
Keyword(s):  
New Species ◽  
Amazon Basin ◽  
Anterior Margin ◽  
Brazilian Amazon ◽  
Neotropical Region ◽  
The State ◽  
Coronal Suture ◽  
Female Adult ◽  
Biting Midges ◽  
Three New Species

Three species of Corethrella Coquillett, 1902 from the state of Amazonas, Brazil are described as new to science based on female adult specimens. Corethrella cabocla Feijó, Belchior, Marialva & Pessoa sp. nov. possesses four large setae on the frons between the ventromedial area of ommatidia, a wide clypeus with 1–4 setae, a wing with the apex of R2 basal to the apex of M2 and with a midlength band, and with the abdomen entirely dark brown. Corethrella ielemdei Feijó, Ramires, Lima & Pessoa sp. nov. possesses an elongated coronal suture, four large setae on the frons between the ventromedial area of ommatidia, a clypeus squarish with 42–43 setae, a wing with the apex of R2 basal to the apex of M1 and with a midlength band and dark scales on the basal and subbasal areas of the anterior margin, legs with dark scales, and with the abdomen entirely dark brown. Corethrella menini Feijó, Picelli, Ríos-Velásquez & Pessoa sp. nov. possesses wings with the apex of R2 basal to the apex of M2 and a midlength band, with darker basal scales along all veins, basal band dark scales on C, Sc, R, M, and Cu and the abdomen entirely dark brown. With the addition of the new species, the numbers of frog-biting midges described in the Amazon basin, Brazil and in Neotropical region are now 31, 49 and 80 species, respectively.

scholarly journals Evolution of Philodendron (Araceae) species along Neotropical biomes

2016 ◽  
Author(s):  
Leticia Loss-Oliveira ◽  
Cassia CMS Sakuragui ◽  
Maria de Lourdes Soares ◽  
Carlos G Schrago
Keyword(s):  
Morphological Diversity ◽  
Neotropical Region ◽  
Last Common Ancestor ◽  
Amazon Forest ◽  
Ancestral Reconstruction ◽  
Biogeographic History ◽  
Early Diversification ◽  
Sister Clade ◽  
History Of ◽  
Wide Geographic Distribution

Philodendron is the second most diverse genus of the Araceae, a tropical monocot family with significant morphological diversity along its wide geographic distribution in the Neotropics. Although evolutionary studies of Philodendron were conducted in recent years, the phylogenetic relationship among its species remains unclear. Additionally, analyses conducted to date suggested the inclusion of all American representatives of a closely related genus, Homalomena, within the Philodendron clade. A thorough evaluation of the phylogeny and timescale of these lineages is thus necessary to elucidate the tempo and mode of evolution of this large Neotropical genus and to unveil the biogeographic history of Philodendron evolution along the Amazonian and Atlantic Rain Forests, as well as open dry forests of South America. To this end, we have estimated the molecular phylogeny for 68 Philodendron species, which consists of the largest sampling assembled to date aiming the study of the evolutionary affinities. We have also performed ancestral reconstruction of species distribution along biomes. Finally, we contrasted these results with the inferred timescale of Philodendron and Homalomena lineage diversification. Our estimates indicate that American Homalomena is the sister clade to Philodendron. The early diversification of Philodendron took place in the Amazon Forest from Early to Middle Miocene, followed by colonization of the Atlantic Forest and the savanna-like landscapes, respectively. Based on the age of the last common ancestor of Philodendron, the species of this genus diversified by rapid radiations, leading to its wide extant distribution in the Neotropical region.

scholarly journals Population Genomics in Rhamdia quelen (Heptapteridae, Siluriformes) Reveals Deep Divergence and Adaptation in the Neotropical Region

Genes ◽  
2020 ◽  
Vol 11 (1) ◽  
pp. 109
Author(s):  
Néstor Ríos ◽  
Adrián Casanova ◽  
Miguel Hermida ◽  
Belén G. Pardo ◽  
Paulino Martínez ◽  
...  
Keyword(s):  
Population Genomics ◽  
Coastal Lagoons ◽  
Neotropical Region ◽  
Divergent Selection ◽  
Environmental Drivers ◽  
Nucleotide Polymorphisms ◽  
Neotropical Fish ◽  
Diversity Pattern ◽  
Rhamdia Quelen ◽  
Lagoon Environment

Rhamdia quelen, a Neotropical fish with hybridization between highly divergent mitochondrial DNA (mtDNA) lineages, represents an interesting evolutionary model. Previous studies suggested that there might be demographic differences between coastal lagoons and riverine environments, as well as divergent populations that could be reproductively isolated. Here, we investigated the genetic diversity pattern of this taxon in the Southern Neotropical Basin system that includes the La Plata Basin, Patos-Merin lagoon basin and the coastal lagoons draining to the SW Atlantic Ocean, through a population genomics approach using 2b-RAD-sequencing-derived single nucleotide polymorphisms (SNPs). The genomic scan identified selection footprints associated with divergence and suggested local adaptation environmental drivers. Two major genomic clusters latitudinally distributed in the Northern and Southern basins were identified, along with consistent signatures of divergent selection between them. Population structure based on the whole set of loci and on the presumptive neutral vs. adaptive loci showed deep genomic divergence between the two major clusters. Annotation of the most consistent SNPs under divergent selection revealed some interesting candidate genes for further functional studies. Moreover, signals of adaptation to a coastal lagoon environment mediated by purifying selection were found. These new insights provide a better understanding of the complex evolutionary history of R. quelen in the southernmost basin of the Neotropical region.

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