scholarly journals Crystal structures of two alanylpiperidine analogues

2021 ◽  
Vol 77 (11) ◽  
Author(s):  
Kalina Mambourg ◽  
Nikolay Tumanov ◽  
Gilles Henon ◽  
Steve Lanners ◽  
Javier Garcia-Ladona ◽  
...  
Keyword(s):  
Crystal Structure ◽  
Risk Assessment ◽  
Hydrogen Bond ◽  
Carboxylic Acid ◽  
Strong Hydrogen Bond ◽  
Carboxylic Group ◽  
X Ray Diffraction ◽  
Synthesis And Crystal Structure ◽  
X Ray ◽  
Crystal Packings

The structure of ethyl 1-[N-(4-methylphenyl)-N-(methylsulfonyl)alanyl]piperidine-4-carboxylate, C19H28N2O5S, I, a compound of interest as activator of Ubiquitin C-terminal Hydrolase-L1 (UCH-L1), was determined by single-crystal X-ray diffraction (SCXRD) analysis. In order to find new activators, a derivative of compound I, namely, 1-[N-(4-methylphenyl)-N-(methylsulfonyl)alanyl]piperidine-4-carboxylic acid, C17H24N2O5S, II, was studied. The synthesis and crystal structure are also reported. Despite being analogues, different crystal packings are observed. Compound II bears a carboxylic group, which favors a strong hydrogen bond. A polymorph risk assessment was carried out to study interactions in compound II.

Neuartige zwitterionische λ5-Spirosilicate: Synthese und Kristallstruktur von Bis[l,2-benzoldiolato(2 – )][2-(dimethylammonio)phenyl]silicat sowie Synthese von Bis[2,3-naphthalindiolato(2 – )][2-(dimethylammonio)phenyl]silicat-Hemiacetonitril-Solvat / Novel Zwitterionic λ5-Spirosilicates: Synthesis and Crystal Structure of Bis[1,2-benzenediolato(2–)][2-(dimethylammonio)phenyl]silicate and Synthesis of Bis[2,3-naphthalenediolato(2–)][2-(dimethylammonio)phenyl]silicate Hemiacetonitrile Solvate

1992 ◽  
Vol 47 (10) ◽  
pp. 1370-1376 ◽  
Author(s):  
Reinhold Tacke ◽  
Frank Wiesenberger ◽  
Angel Lopez-Mras ◽  
Jörg Sperlich ◽  
Günter Mattern
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bond ◽  
Carbon Atom ◽  
Coordination Polyhedron ◽  
Room Temperature ◽  
Trigonal Bipyramid ◽  
X Ray Diffraction ◽  
Apical Position ◽  
Synthesis And Crystal Structure ◽  
X Ray

The zwitterionic λ5-spirosilicates bis[1,2-benzenediolato(2–)][2-(dimethylammonio)-phenyl]silicate (4) and bis [2,3-naphthalenediolato(2–)][2-(dimethylammonio)phenyl]silicate (5; isolated as 5 · ½CH3CN) were synthesized and the crystal structure of 4 was studied by X-ray diffraction. 4 was prepared by reaction of [2-(dimethylamino)phenyl]trimethoxysilane (7) or bis[2-(dimethylamino)phenyl]dimethoxysilane (8) with 1,2-dihydroxybenzene in acetonitrile at room temperature. 5 was synthesized analogously by reaction of 7 or 8 with 2,3-dihydroxynaphthalene. The silanes 7 and 8 were obtained by reaction of tetramethoxysilane (6) with [2-(dimethylamino)phenyl]lithium. The reactions 8 → 4 and 8 → 5 involve a remarkable Si–C cleavage leading to the formation of (dimethylamino)benzene. The pentacoordinate silicon atoms of 4 and 5 are surrounded by four oxygen atoms and one sp2 hybridized carbon atom. The coordination polyhedron of 4 can be described as a distorted square pyramid, the carbon atom being in the apical position (the structure is distorted by 69,1 % from the trigonal bipyramid towards the square pyramid). In the crystal, 4 forms an intramolecular N-H···O hydrogen bond.

Synthesis and Crystal Structure of the Complex of (R,R)-N,N’-bis(salicylal)-1,2-Cyclohexanediamine with Fe3+

2012 ◽  
Vol 441 ◽  
pp. 382-386
Author(s):  
Yin Zhi Jiang ◽  
Lian Zhu Tian ◽  
Yang Zou ◽  
Lian Qun Zhang
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bond ◽  
Elemental Analysis ◽  
Structure Determination ◽  
Nitrate Anion ◽  
Crystal Data ◽  
X Ray Diffraction ◽  
Synthesis And Crystal Structure ◽  
X Ray ◽  
Coordinate Bond

The complex 1 (FeC20H24N3O7) was synthesized from (R, R)-N,N-bis (salicylal )1,2-cyclohexanediamine (H2L) and Fe (NO3)3. The complex 1 has been characterized by the elemental analysis and IR spectra. The crystal structure of the complex 1 was determined by single-crystal X-ray diffraction. Crystal data for the complex 1: space group C2/c , with a = 18.967(2)Å, b = 14.526(2)Å, c = 15.3927(18)Å, α=90.00º, β= 95.885(3) º, γ=90.00º, Z=8, V= 4218.5(9) Å3, Dc= 1.494 mg.m-3, µ= 0.763mm-1, F(000)= 1976. The results of crystal structure determination show that there exists rich H-bond. The complex 1 is composed of one [Fe (L2-) (H2O)2]+cation and one nitrate anion. The L2-and two H2O molecular are attached to the Fe3+viacoordinate bond. The nitrate anion is attached to the cation through hydrogen bond with H (3A) and H (4B) atom. The Fe (III) atom is six-coordinated by linking to one quarter-dentate chelating ligand (L2-) and two mono-dentate chelating H2O ligands.

scholarly journals Synthesis and crystal structure of Cu(II) and Co(II) complexes with 1,3-dimethyl-pyrazole-5-carboxylic acid ligand

2015 ◽  
Vol 80 (7) ◽  
pp. 867-875 ◽  
Author(s):  
Zeljko Jacimovic ◽  
Milica Kosovic ◽  
Sladjana Novakovic ◽  
Gerald Giester ◽  
Ana Radovic
Keyword(s):  
Crystal Structure ◽  
Carboxylic Acid ◽  
Single Crystal ◽  
X Ray Diffraction ◽  
Synthesis And Crystal Structure ◽  
X Ray ◽  
Acid Ligand ◽  
Square Planar ◽  
Monodentate Coordination ◽  
Carboxylic Acid Ligand

In the reaction of 1,3-dimethyl-pyrazole-5-carboxylic acid (HL) with M(OAc)2?4H2O, (M = Cu, Co) two novel complexes have been prepared, square-planar [CuL2(H2O)2] and octahedral [CoL2(MeOH)4]. The crystal structures have been determined by single-crystal X-ray diffraction. In both complexes the deprotonated acid displays monodentate coordination to the metal ions. According to the results of CSD survey this is the first structural report on the metal complexes with N1-substituted pyrazole-5-carboxylic ligand.

scholarly journals High-pressure synthesis and crystal structure of the mixed-cation borate Ga4In4B15O33(OH)3

2019 ◽  
Vol 74 (4) ◽  
pp. 357-363
Author(s):  
Daniela Vitzthum ◽  
Hubert Huppertz
Keyword(s):  
Crystal Structure ◽  
High Pressure ◽  
High Temperature ◽  
Diffraction Data ◽  
X Ray Diffraction ◽  
Synthesis And Crystal Structure ◽  
X Ray ◽  
Mixed Cation ◽  
High Pressure High Temperature ◽  
Pressure Synthesis

AbstractThe mixed cation triel borate Ga4In4B15O33(OH)3 was synthesized in a Walker-type multianvil apparatus at high-pressure/high-temperature conditions of 12.5 GPa and 1300°C. Although the product could not be reproduced in further experiments, its crystal structure could be reliably determined via single-crystal X-ray diffraction data. Ga4In4B15O33(OH)3 crystallizes in the tetragonal space group I41/a (origin choice 2) with the lattice parameters a = 11.382(2), c = 15.244(2) Å, and V = 1974.9(4) Å3. The structure of the quaternary triel borate consists of a complex network of BO4 tetrahedra, edge-sharing InO6 octahedra in dinuclear units, and very dense edge-sharing GaO6 octahedra in tetranuclear units.

A MOF based on a lead(II) 2-oxido-6-methylpyridine-4-carboxylate network

2020 ◽  
Vol 75 (4) ◽  
pp. 365-369
Author(s):  
Long Tang ◽  
Yu Pei Fu ◽  
Na Cui ◽  
Ji Jiang Wang ◽  
Xiang Yang Hou ◽  
...  
Keyword(s):  
Crystal Structure ◽  
Solid State ◽  
Carboxylic Acid ◽  
Thermogravimetric Analysis ◽  
Metal Organic Framework ◽  
X Ray Diffraction ◽  
X Ray ◽  
Connected Node ◽  
Metal Organic ◽  
Solid State Fluorescence

AbstractA new metal-organic framework, [Pb(hmpcaH)2]n (1), has been hydrothermally synthesized from Pb(OAc)2 · 3H2O and 2-hydroxy-6-methylpyridine-4-carboxylic acid (hmpcaH2; 2), and characterized by IR spectroscopy, elemental and thermogravimetric analysis, and single-crystal X-ray diffraction. In complex 1, each hmpcaH− ligand represents a three-connected node to combine with the hexacoordinated Pb(II) ions, generating a 3D binodal (3,6)-connected ant network. The crystal structure of 2 was determined. The solid-state fluorescence properties of 1 and 2 were investigated.

Crystal structure of ziprasidone hydrochloride monohydrate, C21H22Cl2N4OS(H2O)

2015 ◽  
Vol 30 (3) ◽  
pp. 192-198
Author(s):  
James A. Kaduk ◽  
Kai Zhong ◽  
Amy M. Gindhart ◽  
Thomas N. Blanton
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bond ◽  
Powder Diffraction ◽  
Density Functional ◽  
Minimum Energy ◽  
Strong Hydrogen Bond ◽  
Powder Diffraction File ◽  
X Ray ◽  
Hydrochloride Monohydrate ◽  
Positively Charged

The crystal structure of ziprasidone hydrochloride monohydrate has been solved and refined using synchrotron X-ray powder diffraction data, and optimized using density functional techniques. Ziprasidone hydrochloride monohydrate crystallizes in space group P-1 (#2) with a = 7.250 10(3), b = 10.986 66(8), c = 14.071 87(14) Å, α = 83.4310(4), β = 80.5931(6), γ = 87.1437(6)°, V = 1098.00(1) Å3, and Z = 2. The ziprasidone conformation in the solid state is very close to the minimum energy conformation. The positively-charged nitrogen in the ziprasidone makes a strong hydrogen bond with the chloride anion. The water molecule makes two weaker bonds to the chloride, and acts as an acceptor in an N–H⋯O hydrogen bond. The powder pattern is included in the Powder Diffraction File™ as entry 00-064-1492.

Synthesis and Crystal Structure of the Flexible Ligand Coordination Polymer [Co3(bpd)5.5(NCS)6(NH3)]n⋅2H2O(bpd= 1,4-bis (4-pyridyl)-2,3-diaza-1,3-butadiene)

2013 ◽  
Vol 803 ◽  
pp. 80-84
Author(s):  
Yu Qi Liu ◽  
Yong Yang ◽  
Rui Yang ◽  
Xiao Jun Xu
Keyword(s):  
Crystal Structure ◽  
Infrared Spectroscopy ◽  
Coordination Polymer ◽  
Single Crystal ◽  
X Ray Diffraction ◽  
Synthesis And Crystal Structure ◽  
X Ray ◽  
Elemental Analyses ◽  
Ligand Coordination ◽  
Point Symbol

A novel metalorganic coordination polymer, namely [Co3(bpd)5.5(NCS)6(NH3)]n2H2O (1) (bpd=1,4-bis (4-pyridyl)-2,3-diaza-1,3-butadiene), has been synthesized and characterized by elemental analyses, infrared spectroscopy, and single-crystal X-ray diffraction. Compound 1 presents 2D[3,4,-connected 3-nodal net with the point symbol (4268210)(4462)(8210). In addition, four identical 2D single nets is interlocked with each other in parallel, thus directly leading to the formation of a polycatenated layer (2D2D).

Synthesis and crystal structure of (Ag,Pd)22Se6

2013 ◽  
Vol 28 (1) ◽  
pp. 13-17 ◽  
Author(s):  
F. Laufek ◽  
A. Vymazalová ◽  
D.A. Chareev ◽  
A.V. Kristavchuk ◽  
J. Drahokoupil ◽  
...  
Keyword(s):  
Crystal Structure ◽  
Diffraction Data ◽  
Glass Tube ◽  
Structure Type ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
Synthesis And Crystal Structure ◽  
X Ray ◽  
Cell Parameters ◽  
Silica Glass Tube

The (Ag,Pd)22Se6 phase was synthesized from individual elements by silica glass tube technique and structurally characterized from powder X-ray diffraction data. The (Ag,Pd)22Se6 phase crystallizes in Fm$\overline3$m symmetry, unit-cell parameters: a = 12.3169(2) Å, V = 1862.55(5) Å3, Z = 4, and Dc = 10.01 g/cm3. The crystal structure of the (Ag,Pd)22Se6 phase represents a stuffed 3a.3a.3a superstructure of the Pd structure (fcc), where only 4 from 108 available octahedral holes are occupied. Its crystal structure is related to the Cr23C6 structure type.

scholarly journals Synthesis and Complexation Properties of 2-Hydroxy-5-methoxyphenylphosphonic Acid (H3L1). Crystal Structure of the [Cu(H2L1)2(Н2О)2] Complex

2021 ◽  
Vol 91 (11) ◽  
pp. 2176-2186
Author(s):  
G. S. Tsebrikova ◽  
Yu. I. Rogacheva ◽  
I. S. Ivanova ◽  
A. B. Ilyukhin ◽  
V. P. Soloviev ◽  
...  
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bond ◽  
Methoxy Group ◽  
Protonation Constants ◽  
Water Molecules ◽  
X Ray Diffraction ◽  
X Ray ◽  
The Stability ◽  
Intramolecular Hydrogen ◽  
Oxygen Atoms

Abstract 2-Hydroxy-5-methoxyphenylphosphonic acid (H3L1) and the complex [Cu(H2L1)2(H2O)2] were synthesized and characterized by IR spectroscopy, thermogravimetry, and X-ray diffraction analysis. The polyhedron of the copper atom is an axially elongated square bipyramid with oxygen atoms of phenolic and of monodeprotonated phosphonic groups at the base and oxygen atoms of water molecules at the vertices. The protonation constants of the H3L1 acid and the stability constants of its Cu2+ complexes in water were determined by potentiometric titration. The protonation constants of the acid in water are significantly influenced by the intramolecular hydrogen bond and the methoxy group. The H3L1 acid forms complexes CuL‒ and CuL24‒ with Cu2+ in water.

Synthesis and X-ray diffraction analysis of the tetrazole peptide analogue Pro-LeuΨ[CN4]Gly-NH2

1988 ◽  
Vol 53 (11) ◽  
pp. 2863-2876 ◽  
Author(s):  
Giovanni Valle ◽  
Marco Crisma ◽  
Kuo-Long Yu ◽  
Claudio Toniolo ◽  
Ram K. Mishra ◽  
...  
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bond ◽  
Diffraction Analysis ◽  
Dopamine Receptor ◽  
Torsion Angle ◽  
Peptide Bond ◽  
X Ray Diffraction ◽  
X Ray ◽  
Conformationally Restricted ◽  
Bond Characteristic

The synthesis of an analogue of the neuropharmacologically active peptide Pro-Leu-Gly-NH2 in which the Leu-Gly peptide bond has been replaced with a tetrazole moiety was carried out. The molecular and crystal structure of the tetrazole analogue Pro-Leuψ[CN4]Gly-NH2 was determined by X-ray diffraction and a comparison was made with the published X-ray structure of Pro-Leu-Gly-NH2. The tetrazole annular system turns out to be a good conformationally-restricted replacement for the cis-peptide bond in terms of bond lengths, bond angles and the ω torsion angle. The molecule was found to be folded at the -Leuψ[CN4]Gly- sequence, but it did not form the intramolecular N-H···O=C hydrogen bond characteristic of the type Vla β-bend conformation. In contrast to Pro-Leu-Gly-NH2, Pro-Leuψ[CN4]Gly-NH2 was found to be unable to enhance the binding of dopamine receptor agonists to the dopamine receptor.

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