scholarly journals Whole-Genome Sequence of Lactobacillus sakei LT-13 Isolated from Moto Starter of Sake

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Shiro Kato ◽  
Tadao Oikawa
Keyword(s):  
Lactic Acid ◽  
Genome Analysis ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Lactobacillus Sakei ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Content Type ◽  
Putative Protein ◽  
Protein Coding Genes

ABSTRACT Lactobacillus sakei strain LT-13 is a lactic acid bacterium isolated from moto starter of Japanese sake. This genome analysis revealed that the genome is composed of a circular chromosome and one plasmid, which contain 1,938 and 8 putative protein-coding genes, respectively.

scholarly journals Whole-Genome Sequence of Leuconostoc mesenteroides LT-38, a Non-Spore-Forming Gram-Positive Lactic Acid Bacterium

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Shiro Kato ◽  
Tadao Oikawa
Keyword(s):  
Lactic Acid ◽  
Lactic Acid Bacterium ◽  
Genome Sequence ◽  
Leuconostoc Mesenteroides ◽  
Whole Genome Sequence ◽  
Gram Positive ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Content Type ◽  
Putative Protein

ABSTRACT The present study reports the complete genome sequence of Leuconostoc mesenteroides strain LT-38, which is a non-spore-forming Gram-positive lactic acid bacterium. The genome is composed of a 2,022,184-bp circular chromosome and contains 2,005 putative protein-coding genes.

scholarly journals Whole-Genome Sequence of the Fruiting Myxobacterium Cystobacter fuscus DSM 52655

2017 ◽  
Vol 5 (43) ◽  
Author(s):  
Anke Treuner-Lange ◽  
Marc Bruckskotten ◽  
Oliver Rupp ◽  
Alexander Goesmann ◽  
Lotte Søgaard-Andersen
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Fruiting Body Formation ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Body Formation ◽  
Putative Protein

ABSTRACT Among myxobacteria, the genus Cystobacter is known not only for fruiting body formation but also for formation of secondary metabolites, such as cystobactamids and cystothiazols. Here, we present the complete genome sequence of the Cystobacter fuscus strain DSM 52655, which comprises 12,349,744 bp and 9,836 putative protein-coding sequences.

scholarly journals Complete Genome Sequence of Staphylococcus epidermidis 1457

2017 ◽  
Vol 5 (22) ◽  
Author(s):  
Madeline R. Galac ◽  
Jason Stam ◽  
Rosslyn Maybank ◽  
Mary Hinkle ◽  
Dietrich Mack ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Staphylococcus Epidermidis ◽  
Complete Genome Sequence ◽  
Genetic Manipulation ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Related Research ◽  
Protein Coding Genes

ABSTRACT Staphylococcus epidermidis 1457 is a frequently utilized strain that is amenable to genetic manipulation and has been widely used for biofilm-related research. We report here the whole-genome sequence of this strain, which encodes 2,277 protein-coding genes and 81 RNAs within its 2.4-Mb genome and plasmid.

scholarly journals Whole-Genome Sequence of Rummeliibacillus stabekisii Strain PP9 Isolated from Antarctic Soil

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Fábio Faria da Mota ◽  
Renata Estebanez Vollú ◽  
Diogo Jurelevicius ◽  
Lucy Seldin
Keyword(s):  
Soil Sample ◽  
Genome Sequence ◽  
Noncoding Rnas ◽  
Whole Genome Sequence ◽  
Trna Genes ◽  
Whole Genome ◽  
Antarctic Soil ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Protein Coding Genes

The whole genome of Rummeliibacillus stabekisii PP9, isolated from a soil sample from Antarctica, consists of a circular chromosome of 3,412,092 bp and a circular plasmid of 8,647 bp, with 3,244 protein-coding genes, 12 copies of the 16S-23S-5S rRNA operon, 101 tRNA genes, and 6 noncoding RNAs (ncRNAs).

scholarly journals Whole-Genome Sequence of French Clinical Olivibacter jilunii Strain P8502

2019 ◽  
Vol 8 (31) ◽  
Author(s):  
Hussein Anani ◽  
May Khodor ◽  
Didier Raoult ◽  
Pierre-Edouard Fournier
Keyword(s):  
Genome Sequencing ◽  
Rectal Swab ◽  
Bacterial Species ◽  
Whole Genome Sequence ◽  
Clinical Strain ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

In 2013, Olivibacter jilunii was reported as a bacterial species isolated from contaminated soil. In 2018, a clinical strain from the same species was isolated from the rectal swab of a Hajj pilgrim. Genome sequencing yielded 6,704,032 bp, with 41.2% G+C content, 5,406 protein-coding genes, and 54 predicted RNA genes in strain P8502.

scholarly journals Whole-Genome Sequence of Streptococcus parauberis Strain SP-llh, Isolated from Cows with Mastitis in Western China

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Longhai Liu ◽  
Feng Yang ◽  
Xinpu Li ◽  
Jinyin Luo ◽  
Zhe Zhang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Western China ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Streptococcus Parauberis ◽  
Large Contigs

ABSTRACT Streptococcus parauberis strain SP-llh was isolated from cows with mastitis in western China in 2015. The 2,522,235-bp genome sequence consists of 46 large contigs in 14 scaffolds and contains 2,620 predicted protein-coding genes, with a G+C content of 35.3%.

scholarly journals Whole-Genome Sequence of Haloimpatiens lingqiaonensis Strain P8956

2019 ◽  
Vol 8 (43) ◽  
Author(s):  
Hussein Anani ◽  
Didier Raoult ◽  
Pierre-Edouard Fournier
Keyword(s):  
Genome Sequence ◽  
Bacterial Isolate ◽  
Paper Mill ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Paper Mill Wastewater ◽  
Rna Genes

In 2016, Haloimpatiens lingqiaonensis was described as a bacterial isolate from paper mill wastewater. Previously, no whole-genome sequence was available for this microorganism. Whole-genome sequencing of strain P8956 yielded a 3,295,388-bp genome with a 30.7% G+C content, 2,917 protein-coding genes, and 95 predicted RNA genes.

scholarly journals Whole-Genome Sequence of Lactobacillus acidophilus PNW3, Isolated from Weaned Piglets of the Indigenous South African Windsnyer Pig Breed

2019 ◽  
Vol 8 (25) ◽  
Author(s):  
Kazeem A. Alayande ◽  
Olayinka A. Aiyegoro ◽  
Collins N. Ateba
Keyword(s):  
South African ◽  
Genome Sequence ◽  
Lactobacillus Acidophilus ◽  
Draft Genome ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Weaned Piglets ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

A draft genome sequence of Lactobacillus acidophilus PNW3 is reported. The genome assembly is 1,857,655 bp long in 25 contigs with an N 50 value of 230,557 bp and a G+C content of 34.6%. The total number of predicted protein-coding genes is 1,776, with 58 predicted RNAs and 42 predicted pseudogenes.

scholarly journals Complete Genome Sequence of Staphylococcus epidermidis CSF41498

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
M. R. Galac ◽  
Tra-My Hoang ◽  
Ana C. Ong ◽  
M. Hinkle ◽  
J. P. O’Gara ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Staphylococcus Epidermidis ◽  
Complete Genome Sequence ◽  
Biofilm Formation ◽  
Genetic Manipulation ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

Staphylococcus epidermidis CSF41498 is amenable to genetic manipulation and has been used to study mechanisms of biofilm formation. We report here the whole-genome sequence of this strain, which contains 2,427 protein-coding genes and 82 RNAs within its 2,481,008-bp-long genome, as well as three plasmids.

scholarly journals Whole-Genome Sequence of Corynebacterium xerosis Strain GS1, Isolated from Yak in Gansu Province, China

2019 ◽  
Vol 8 (37) ◽  
Author(s):  
Fengqin Wen ◽  
Xiaoyong Xing ◽  
Shijun Bao ◽  
Yonghao Hu ◽  
Bao-cheng Hao
Keyword(s):  
Genome Sequence ◽  
Liver Lesion ◽  
Gansu Province ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

We report here the isolation, sequencing of the complete closed genome, and annotation of Corynebacterium xerosis strain GS1. This strain was isolated from the liver lesion of a yak in Gansu Province, China. The genome consists of one chromosome with 2,738,835 bp and comprises 2,304 protein-coding genes.

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