scholarly journals Complete Genome Sequence of the Novel Bacteriophage pSco-10 Infecting Staphylococcus cohnii

2017 ◽  
Vol 5 (47) ◽  
Author(s):  
Jin Woo Jun ◽  
Sib Sankar Giri ◽  
Hyoun Joong Kim ◽  
Cheng Chi ◽  
Saekil Yun ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The Novel ◽  
Content Type ◽  
Genomic Study ◽  
Staphylococcus Cohnii ◽  
Current Report

ABSTRACT Herein, we report the complete genome sequence of the Staphylococcus Myoviridae phage pSco-10 infecting Staphylococcus cohnii. The phage pSco-10 was isolated from duck feces collected from four farms in South Korea. The current report provides valuable information for genomic study of phages.

scholarly journals Complete Genome Sequence of Streptococcus mutans Strain MD, Which Produces Highly Potent Mutacins

2020 ◽  
Vol 9 (33) ◽  
Author(s):  
Saswati Biswas ◽  
Indranil Biswas
Keyword(s):  
Streptococcus Mutans ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Comparative Genomic ◽  
Content Type ◽  
Genomic Study ◽  
Comparative Genomic Study ◽  
Genome Information

ABSTRACT Here, we report the complete genome sequence of Streptococcus mutans strain MD, which produces potent mutacins capable of inhibiting streptococci. MD is a relatively uncharacterized strain whose genome information was unavailable. This study provides useful information for comparative genomic study and for understanding the repertoire of mutacins in S. mutans.

scholarly journals Complete Genome Sequence of Leuconostoc kimchii Strain NKJ218, Isolated from Homemade Kimchi

2019 ◽  
Vol 8 (27) ◽  
Author(s):  
Ji Young Jung ◽  
Jin-Woo Jeong ◽  
Seung-Young Lee ◽  
Hyun Mi Jin ◽  
Hee Won Choi ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Pacbio Rs Ii ◽  
A Genome

ABSTRACT Leuconostoc kimchii strain NKJ218 was isolated from homemade kimchi in South Korea. The whole genome was sequenced using the PacBio RS II and Illumina NovoSeq 6000 platforms. Here, we report a genome sequence of strain NKJ218, which consists of a 1.9-Mbp chromosome and three plasmid contigs. A total of 2,005 coding sequences (CDS) were predicted, including 1,881 protein-coding sequences.

scholarly journals Complete Genome Sequence of Aeromonas rivipollensis KN-Mc-11N1, Isolated from a Wild Nutria (Myocastor coypus) in South Korea

2018 ◽  
Vol 7 (4) ◽  
Author(s):  
Seon Young Park ◽  
Se Ra Lim ◽  
Jee Soo Son ◽  
Hye Kwon Kim ◽  
Sun-Woo Yoon ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Analysis ◽  
Zoonotic Potential ◽  
Myocastor Coypus ◽  
Content Type ◽  
Zoonotic Pathogens

We report here the complete genome sequence of Aeromonas rivipollensis KN-Mc-11N1, which was isolated from a wild nutria (Myocastor coypus) in South Korea. Genomic analysis indicated that A. rivipollensis may have zoonotic potential similar to that of other aeromonads, and nutria could be one of the sources of transmission of zoonotic pathogens to humans.

scholarly journals Complete Genome Sequence of the Novel Klebsiella pneumoniae Phage Marfa

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Laith Harb ◽  
Justin Boeckman ◽  
Heather Newkirk ◽  
Mei Liu ◽  
Jason J. Gill ◽  
...  
Keyword(s):  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The Novel ◽  
Content Type ◽  
Phage T4 ◽  
Gene Functions

Here, we describe the complete genome sequence of the T4-like Klebsiella pneumoniae myophage Marfa. In its 168,532-bp genome, Marfa has 289 genes, for which 122 gene functions were predicted. Many similar proteins are shared between Marfa and phage T4, as well as its closest phage relatives.

scholarly journals Complete Genome Sequence of the Novel Roseimicrobium sp. Strain ORNL1, a Verrucomicrobium Isolated from the Populus deltoides Rhizosphere

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Mircea Podar ◽  
Joel Turner ◽  
Leah H. Burdick ◽  
Dale A. Pelletier
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Populus Deltoides ◽  
Soil Bacterium ◽  
The Novel ◽  
Content Type ◽  
Eastern Cottonwood ◽  
Long Reads

ABSTRACT Roseimicrobium sp. strain ORNL1 is a soil bacterium that belongs to the phylum Verrucomicrobia and was isolated from the rhizosphere of a forest Eastern cottonwood tree, Populus deltoides, in Tennessee. Its 7.9-Mb chromosome was completely sequenced using PacBio long reads and is predicted to encode 6,288 proteins and 76 RNAs.

scholarly journals Complete Genome Sequence of Vibrio rotiferianus Strain AM7

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Apirak Wiseschart ◽  
Kusol Pootanakit ◽  
Kei Kitahara
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The Novel ◽  
Sequencing Data ◽  
Short Read ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

ABSTRACT We isolated the novel strain Vibrio rotiferianus AM7 from the shell of an abalone. In this article, we report the complete genome sequence of this organism, which was obtained by combining Oxford Nanopore long-read and Illumina short-read sequencing data.

scholarly journals Complete Genome Sequence of Staphylococcus aureus Bacteriophage pSa-3

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Sang Guen Kim ◽  
Jin Woo Jun ◽  
Sib Sankar Giri ◽  
Saekil Yun ◽  
Hyoun Joong Kim ◽  
...  
Keyword(s):  
Staphylococcus Aureus ◽  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Skin Lesions ◽  
Clinical Isolates ◽  
Sewage Sample ◽  
Content Type

ABSTRACT Staphylococcus aureus phage pSa-3, isolated in South Korea from a sewage sample, has a 137-kb genome with 29% G+C content. This phage was targeted to control the bacteria in clinical isolates (mainly from skin lesions) and can be used in the decolonization of S. aureus.

scholarly journals Complete Genome Sequence of Salmonella enterica Bacteriophage PRF-SP1

2021 ◽  
Vol 10 (47) ◽  
Author(s):  
Prasanna Mutusamy ◽  
Sasireigga Jaya Jothi ◽  
Su Yin Lee ◽  
Bent Petersen ◽  
Thomas Sicheritz-Ponten ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Salmonella Enterica ◽  
Complete Genome ◽  
National Park ◽  
The Novel ◽  
Content Type ◽  
Double Stranded Dna ◽  
Protein Encoding ◽  
Encoding Genes

We characterized the complete genome sequence of the lytic Salmonella enterica bacteriophage PRF-SP1, isolated from Penang National Park, a conserved rainforest in northern Malaysia. The novel phage species from the Autographiviridae family has a 39,966-bp double-stranded DNA (dsDNA) genome containing 49 protein-encoding genes and shares 90.96% similarity with Escherichia phage DY1.

scholarly journals Complete Genome Sequence of the Soil Bacterium Pseudomonas kribbensis Strain 46-2T

2018 ◽  
Vol 7 (21) ◽  
Author(s):  
Haeyoung Jeong ◽  
Eugene Rha ◽  
Haseong Kim ◽  
Seung-Goo Lee
Keyword(s):  
South Korea ◽  
Pseudomonas Fluorescens ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Novel Species ◽  
Soil Bacterium ◽  
Garden Soil ◽  
Content Type

Pseudomonas kribbensis is a novel species belonging to the Pseudomonas fluorescens intrageneric group of the genus Pseudomonas. Herein, we report the complete genome sequence of strain 46-2T, isolated from garden soil in Daejeon, South Korea.

scholarly journals Complete Genome Sequence of the Temperate Klebsiella pneumoniae Phage KPP5665-2

2017 ◽  
Vol 5 (43) ◽  
Author(s):  
Gaby Carl ◽  
Claudia Jäckel ◽  
Josephine Grützke ◽  
Stefan Hertwig ◽  
Mirjam Grobbel ◽  
...  
Keyword(s):  
Klebsiella Pneumoniae ◽  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome ◽  
The Novel ◽  
Content Type ◽  
Narrow Host Range

ABSTRACT We describe here the genome sequence of the novel temperate Klebsiella pneumoniae phage KPP5665-2 isolated from a Klebsiella pneumoniae strain recovered from milk in Germany in 2016. The phage exhibited a narrow host range and a siphoviridal morphology. KPP5665-2-related prophage sequences were detected in whole-genome sequencing (WGS) data of various Klebsiella species isolates.

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