scholarly journals Complete Genome Sequence of the Soil Bacterium Pseudomonas kribbensis Strain 46-2T

2018 ◽  
Vol 7 (21) ◽  
Author(s):  
Haeyoung Jeong ◽  
Eugene Rha ◽  
Haseong Kim ◽  
Seung-Goo Lee
Keyword(s):  
South Korea ◽  
Pseudomonas Fluorescens ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Novel Species ◽  
Soil Bacterium ◽  
Garden Soil ◽  
Content Type

Pseudomonas kribbensis is a novel species belonging to the Pseudomonas fluorescens intrageneric group of the genus Pseudomonas. Herein, we report the complete genome sequence of strain 46-2T, isolated from garden soil in Daejeon, South Korea.

scholarly journals Complete Genome Sequence of the Cytokinin-Producing Biocontrol Strain Pseudomonas fluorescens G20-18

2021 ◽  
Vol 10 (30) ◽  
Author(s):  
Tue K. Nielsen ◽  
Mengistu F. Mekureyaw ◽  
Lars H. Hansen ◽  
Mette H. Nicolaisen ◽  
Thomas G. Roitsch ◽  
...  
Keyword(s):  
Plant Growth ◽  
Pseudomonas Fluorescens ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gene Clusters ◽  
Circular Chromosome ◽  
Content Type ◽  
Plant Growth Promoting ◽  
Growth Promoting

Here, we report the complete genome sequence of the cytokinin-producing plant growth-promoting strain Pseudomonas fluorescens G20-18. The complete genome assembly resulted in a single, circular chromosome of 6.48 Mbp and harbors several secondary metabolite biosynthesis gene clusters that are potentially involved in its plant growth-promoting function.

scholarly journals Complete Genome Sequence of Leuconostoc kimchii Strain NKJ218, Isolated from Homemade Kimchi

2019 ◽  
Vol 8 (27) ◽  
Author(s):  
Ji Young Jung ◽  
Jin-Woo Jeong ◽  
Seung-Young Lee ◽  
Hyun Mi Jin ◽  
Hee Won Choi ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Pacbio Rs Ii ◽  
A Genome

ABSTRACT Leuconostoc kimchii strain NKJ218 was isolated from homemade kimchi in South Korea. The whole genome was sequenced using the PacBio RS II and Illumina NovoSeq 6000 platforms. Here, we report a genome sequence of strain NKJ218, which consists of a 1.9-Mbp chromosome and three plasmid contigs. A total of 2,005 coding sequences (CDS) were predicted, including 1,881 protein-coding sequences.

scholarly journals Complete Genome Sequence of Aeromonas rivipollensis KN-Mc-11N1, Isolated from a Wild Nutria (Myocastor coypus) in South Korea

2018 ◽  
Vol 7 (4) ◽  
Author(s):  
Seon Young Park ◽  
Se Ra Lim ◽  
Jee Soo Son ◽  
Hye Kwon Kim ◽  
Sun-Woo Yoon ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Analysis ◽  
Zoonotic Potential ◽  
Myocastor Coypus ◽  
Content Type ◽  
Zoonotic Pathogens

We report here the complete genome sequence of Aeromonas rivipollensis KN-Mc-11N1, which was isolated from a wild nutria (Myocastor coypus) in South Korea. Genomic analysis indicated that A. rivipollensis may have zoonotic potential similar to that of other aeromonads, and nutria could be one of the sources of transmission of zoonotic pathogens to humans.

scholarly journals Complete Genome Sequence of Bacillus cereus Strain PL1, Isolated from Soil in Japan

2020 ◽  
Vol 9 (12) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Erina Hase ◽  
Tomomasa Maruya
Keyword(s):  
Bacillus Cereus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Soil Bacterium ◽  
Nucleotide Identity ◽  
Average Nucleotide Identity ◽  
Content Type ◽  
Bacterium Strain

We isolated the soil bacterium strain PL1 and herein report its complete genome sequence. The strain presented 97% average nucleotide identity (ANI) to Bacillus cereus and 91% ANIs to other members of the B. cereus group, indicating that it is affiliated with B. cereus.

scholarly journals Complete Genome Sequence of Sphingobium barthaii KK22, a High-Molecular-Weight Polycyclic Aromatic Hydrocarbon-Degrading Soil Bacterium

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Jiro F. Mori ◽  
Robert A. Kanaly
Keyword(s):  
Molecular Weight ◽  
Polycyclic Aromatic Hydrocarbon ◽  
Aromatic Hydrocarbon ◽  
High Molecular Weight ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Soil Bacterium ◽  
Content Type ◽  
Polycyclic Aromatic

ABSTRACT Sphingobium barthaii KK22T is a high-molecular-weight polycyclic aromatic hydrocarbon-degrading soil bacterium that has been investigated in biotransformation, microbial ecology, and DNA damage studies. The complete genome sequence of S. barthaii revealed four closed circular sequences, including two chromosomes, a megaplasmid, and a smaller plasmid, by hybrid assembly using short- and long-read sequencing technologies.

scholarly journals Complete Genome Sequence of Cupriavidus necator KK10, an Azaarene-Degrading and Polyhydroxyalkanoate-Producing Soil Bacterium

2021 ◽  
Vol 10 (28) ◽  
Author(s):  
Jiro F. Mori ◽  
Miho Nagai ◽  
Robert A. Kanaly
Keyword(s):  
Genome Sequence ◽  
Diesel Fuel ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Cupriavidus Necator ◽  
Soil Bacterium ◽  
Functional Genes ◽  
Content Type

Cupriavidus necator KK10 has been investigated in azaarene and diesel fuel biodegradation studies and is capable of polyhydroxyalkanoate production. Its complete genome sequence revealed two closed circular sequences, the chromosome (6.68 Mb) and plasmid (1.67 Mb). The KK10 genome carries functional genes potentially responsible for azaarene biodegradation and polyhydroxyalkanoate (PHA) biosynthesis.

scholarly journals Complete Genome Sequence of the Novel Roseimicrobium sp. Strain ORNL1, a Verrucomicrobium Isolated from the Populus deltoides Rhizosphere

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Mircea Podar ◽  
Joel Turner ◽  
Leah H. Burdick ◽  
Dale A. Pelletier
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Populus Deltoides ◽  
Soil Bacterium ◽  
The Novel ◽  
Content Type ◽  
Eastern Cottonwood ◽  
Long Reads

ABSTRACT Roseimicrobium sp. strain ORNL1 is a soil bacterium that belongs to the phylum Verrucomicrobia and was isolated from the rhizosphere of a forest Eastern cottonwood tree, Populus deltoides, in Tennessee. Its 7.9-Mb chromosome was completely sequenced using PacBio long reads and is predicted to encode 6,288 proteins and 76 RNAs.

scholarly journals Complete Genome Sequence of Staphylococcus aureus Bacteriophage pSa-3

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Sang Guen Kim ◽  
Jin Woo Jun ◽  
Sib Sankar Giri ◽  
Saekil Yun ◽  
Hyoun Joong Kim ◽  
...  
Keyword(s):  
Staphylococcus Aureus ◽  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Skin Lesions ◽  
Clinical Isolates ◽  
Sewage Sample ◽  
Content Type

ABSTRACT Staphylococcus aureus phage pSa-3, isolated in South Korea from a sewage sample, has a 137-kb genome with 29% G+C content. This phage was targeted to control the bacteria in clinical isolates (mainly from skin lesions) and can be used in the decolonization of S. aureus.

scholarly journals Complete Genome Sequence of Gordonia rubripertincta SD5, a Soil Bacterium Isolated from a Di-(2-Ethylhexyl) Phthalate-Degrading Enrichment Culture

2020 ◽  
Vol 9 (45) ◽  
Author(s):  
Sang-Soo Han ◽  
Hye Kyeong Kang ◽  
Bok Yeon Jo ◽  
Byung-Gon Ryu ◽  
Hyun Mi Jin ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Enrichment Culture ◽  
Soil Bacterium ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Ethylhexyl Phthalate

ABSTRACT We report the complete genome sequence of Gordonia rubripertincta SD5, isolated from a soil-derived di-(2-ethylhexyl) phthalate-degrading enrichment culture. The final genome assembly consists of a 5.10-Mbp chromosome and a plasmid (159 kbp). A total of 4,814 coding sequences were predicted, including 4,741 protein-coding sequences.

scholarly journals Complete Genome Sequence of Mycoplasma gallisepticum Strain KUVMG001, an Isolate from South Korea

2021 ◽  
Vol 10 (19) ◽  
Author(s):  
Yongjun Song ◽  
Taesoo Kim ◽  
Tae-Min La ◽  
Hong-Jae Lee ◽  
Yoonsuk Lee ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Respiratory Diseases ◽  
Field Isolate ◽  
Mycoplasma Gallisepticum ◽  
Economic Losses ◽  
Content Type ◽  
Chronic Respiratory Diseases

Mycoplasma gallisepticum causes chronic respiratory diseases in poultry and economic losses to the chicken and turkey industry. We report the complete genome sequence of the field isolate strain KUVMG001 of Mycoplasma gallisepticum from South Korea.

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