scholarly journals Complete Genome Sequence of Aeromonas rivipollensis KN-Mc-11N1, Isolated from a Wild Nutria (Myocastor coypus) in South Korea

2018 ◽  
Vol 7 (4) ◽  
Author(s):  
Seon Young Park ◽  
Se Ra Lim ◽  
Jee Soo Son ◽  
Hye Kwon Kim ◽  
Sun-Woo Yoon ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Analysis ◽  
Zoonotic Potential ◽  
Myocastor Coypus ◽  
Content Type ◽  
Zoonotic Pathogens

We report here the complete genome sequence of Aeromonas rivipollensis KN-Mc-11N1, which was isolated from a wild nutria (Myocastor coypus) in South Korea. Genomic analysis indicated that A. rivipollensis may have zoonotic potential similar to that of other aeromonads, and nutria could be one of the sources of transmission of zoonotic pathogens to humans.

scholarly journals Complete Genome Sequence of Rhizobium japonicum Podophage Pasto

2021 ◽  
Vol 10 (3) ◽  
Author(s):  
Nikhil Manuel ◽  
Leika Rushing ◽  
Aravind Ravindran ◽  
Heather Newkirk ◽  
Ben Burrowes ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Analysis ◽  
Rhizobium Japonicum ◽  
Negative Bacterium ◽  
Significant Similarity ◽  
Gram Negative ◽  
Content Type

ABSTRACT Rhizobium japonicum is a Gram-negative bacterium of interest for research into nitrogen fixation in legumes. This article describes the isolation, sequencing, and annotation of R. japonicum podophage Pasto. While it shows no significant similarity to identified phages, genomic analysis indicates that Pasto may be temperate and is a novel T7-like podophage.

scholarly journals Complete Genome Sequence of Leuconostoc kimchii Strain NKJ218, Isolated from Homemade Kimchi

2019 ◽  
Vol 8 (27) ◽  
Author(s):  
Ji Young Jung ◽  
Jin-Woo Jeong ◽  
Seung-Young Lee ◽  
Hyun Mi Jin ◽  
Hee Won Choi ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Pacbio Rs Ii ◽  
A Genome

ABSTRACT Leuconostoc kimchii strain NKJ218 was isolated from homemade kimchi in South Korea. The whole genome was sequenced using the PacBio RS II and Illumina NovoSeq 6000 platforms. Here, we report a genome sequence of strain NKJ218, which consists of a 1.9-Mbp chromosome and three plasmid contigs. A total of 2,005 coding sequences (CDS) were predicted, including 1,881 protein-coding sequences.

scholarly journals Complete Genome Sequence of Bartonella alsatica Strain IBS 382 (CIP 105477)

2020 ◽  
Vol 9 (34) ◽  
Author(s):  
Arno Thibau ◽  
Tilman G. Schultze ◽  
Wibke Ballhorn ◽  
Volkhard A. J. Kempf
Keyword(s):  
Genome Sequence ◽  
Single Molecule ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Zoonotic Potential ◽  
Smrt Sequencing ◽  
Content Type ◽  
Long Read ◽  
Human Infections ◽  
Future Work

ABSTRACT Bartonella alsatica causes bacteremia in rabbits and, rarely, human infections. Here, we announce the complete and closed genome of B. alsatica IBS 382 (CIP 105477), generated by long-read Pacific Biosciences single-molecule real-time (SMRT) sequencing. The availability of this genome sequence allows future work on understanding the zoonotic potential of this pathogen.

scholarly journals Complete Genome Sequence of Streptococcus mutans 27-3, an Active Extracellular Membrane Vesicle Producer

2021 ◽  
Vol 10 (25) ◽  
Author(s):  
Xiaochang Huang ◽  
Justin Merritt ◽  
Zezhang Tom Wen
Keyword(s):  
Streptococcus Mutans ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Membrane Vesicle ◽  
Genomic Analysis ◽  
Membrane Vesicles ◽  
Laboratory Strain ◽  
Comparative Genomic ◽  
Content Type

Here, we report the complete genome sequence of Streptococcus mutans 27-3. Isolated from a caries-active patient, 27-3 produces significantly more extracellular membrane vesicles than the commonly used laboratory strain UA159. This study provides useful information for comparative genomic analysis and better understanding of regulation of vesiculogenesis in this bacterium.

scholarly journals Complete Genome Sequence of Staphylococcus aureus Bacteriophage pSa-3

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Sang Guen Kim ◽  
Jin Woo Jun ◽  
Sib Sankar Giri ◽  
Saekil Yun ◽  
Hyoun Joong Kim ◽  
...  
Keyword(s):  
Staphylococcus Aureus ◽  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Skin Lesions ◽  
Clinical Isolates ◽  
Sewage Sample ◽  
Content Type

ABSTRACT Staphylococcus aureus phage pSa-3, isolated in South Korea from a sewage sample, has a 137-kb genome with 29% G+C content. This phage was targeted to control the bacteria in clinical isolates (mainly from skin lesions) and can be used in the decolonization of S. aureus.

scholarly journals Complete Genome Sequence of the Soil Bacterium Pseudomonas kribbensis Strain 46-2T

2018 ◽  
Vol 7 (21) ◽  
Author(s):  
Haeyoung Jeong ◽  
Eugene Rha ◽  
Haseong Kim ◽  
Seung-Goo Lee
Keyword(s):  
South Korea ◽  
Pseudomonas Fluorescens ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Novel Species ◽  
Soil Bacterium ◽  
Garden Soil ◽  
Content Type

Pseudomonas kribbensis is a novel species belonging to the Pseudomonas fluorescens intrageneric group of the genus Pseudomonas. Herein, we report the complete genome sequence of strain 46-2T, isolated from garden soil in Daejeon, South Korea.

scholarly journals Complete Genome Sequence of Akkermansia glycaniphila Strain PytT, a Mucin-Degrading Specialist of the Reticulated Python Gut

2017 ◽  
Vol 5 (1) ◽  
Author(s):  
Janneke P. Ouwerkerk ◽  
Jasper J. Koehorst ◽  
Peter J. Schaap ◽  
Jarmo Ritari ◽  
Lars Paulin ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Analysis ◽  
Human Strain ◽  
Aerobic Respiration ◽  
Content Type ◽  
Akkermansia Muciniphila

ABSTRACT Akkermansia glycaniphila is a novel Akkermansia species that was isolated from the intestine of the reticulated python and shares the capacity to degrade mucin with the human strain Akkermansia muciniphila MucT. Here, we report the complete genome sequence of strain PytT of 3,074,121 bp. The genomic analysis reveals genes for mucin degradation and aerobic respiration.

scholarly journals Complete Genome Sequence of Mycoplasma gallisepticum Strain KUVMG001, an Isolate from South Korea

2021 ◽  
Vol 10 (19) ◽  
Author(s):  
Yongjun Song ◽  
Taesoo Kim ◽  
Tae-Min La ◽  
Hong-Jae Lee ◽  
Yoonsuk Lee ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Respiratory Diseases ◽  
Field Isolate ◽  
Mycoplasma Gallisepticum ◽  
Economic Losses ◽  
Content Type ◽  
Chronic Respiratory Diseases

Mycoplasma gallisepticum causes chronic respiratory diseases in poultry and economic losses to the chicken and turkey industry. We report the complete genome sequence of the field isolate strain KUVMG001 of Mycoplasma gallisepticum from South Korea.

scholarly journals Complete Genome Sequence of Lactobacillus harbinensis Strain NSMJ42, Isolated from Makgeolli, a Traditional Korean Alcoholic Beverage

2019 ◽  
Vol 8 (48) ◽  
Author(s):  
Ji Young Jung ◽  
Sang-Soo Han ◽  
Z-Hun Kim ◽  
Byung-Gon Ryu ◽  
Hyun Mi Jin ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Genome Assembly ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Alcoholic Beverage ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

In the present work, we report the complete genome sequence of Lactobacillus harbinensis NSMJ42, isolated from makgeolli (a Korean traditional alcoholic beverage) in South Korea. The final genome assembly consists of a 3.29-Mbp chromosome with 3,082 protein-coding sequences and a G+C content of 53.36%.

scholarly journals Complete Genome Sequence of the Novel Bacteriophage pSco-10 Infecting Staphylococcus cohnii

2017 ◽  
Vol 5 (47) ◽  
Author(s):  
Jin Woo Jun ◽  
Sib Sankar Giri ◽  
Hyoun Joong Kim ◽  
Cheng Chi ◽  
Saekil Yun ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The Novel ◽  
Content Type ◽  
Genomic Study ◽  
Staphylococcus Cohnii ◽  
Current Report

ABSTRACT Herein, we report the complete genome sequence of the Staphylococcus Myoviridae phage pSco-10 infecting Staphylococcus cohnii. The phage pSco-10 was isolated from duck feces collected from four farms in South Korea. The current report provides valuable information for genomic study of phages.

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