scholarly journals Draft Genome Sequencing of the Highly Halotolerant and Allopolyploid Yeast Zygosaccharomyces rouxii NBRC 1876

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Atsushi Sato ◽  
Kenichiro Matsushima ◽  
Kenshiro Oshima ◽  
Masahira Hattori ◽  
Yasuji Koyama
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Food Production ◽  
Draft Genome ◽  
Soy Sauce ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Zygosaccharomyces Rouxii ◽  
High Concentrations ◽  
Draft Genome Sequencing

ABSTRACT The highly halotolerant and allopolyploid yeast Zygosaccharomyces rouxii is industrially used for the food production in high concentrations of salt, such as brewing soy sauce and miso paste. Here, we report the draft genome sequence of Z. rouxii NBRC 1876 isolated from miso paste.

scholarly journals Draft Genome Sequence of Herminiimonas contaminans Strain CCM 7991T, a Biopharmaceutical Contaminant

2021 ◽  
Vol 10 (7) ◽  
Author(s):  
Luis Johnson Kangale ◽  
Rita Zgheib ◽  
Eric Ghigo ◽  
Didier Raoult ◽  
Pierre-Edouard Fournier
Keyword(s):  
Production Process ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Bacterial Species ◽  
Draft Genome ◽  
Noncoding Rnas ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Biopharmaceutical Production ◽  
Draft Genome Sequencing

ABSTRACT Herminiimonas contaminans was described as a new bacterial species, a contaminant isolated from a biopharmaceutical production process in Sweden. Since the genome sequence was not available, we performed draft genome sequencing. The genome of strain CCM 7991T (=CCUG 53591T = DSM 28178T = Marseille-Q4544T) was 4,038,814 bp long, with a G+C content of 53.9%; a total of 3,860 genes were identified, along with 3 rRNAs, 44 tRNAs, and 4 noncoding RNAs (ncRNAs).

scholarly journals Draft Genome Sequencing of Ascomycetes Yeast Pichia membranifaciens KS47-1, Which Shows High Acetate Resistance in Lignocellulosic Feedstock Hydrolysate

2017 ◽  
Vol 5 (8) ◽  
Author(s):  
Masaaki Konishi ◽  
Tomoko Arakawa ◽  
Yuta Kato ◽  
Masashi Ishida ◽  
Jun-ichi Horiuchi
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Growth Inhibitors ◽  
Pichia Membranifaciens ◽  
Lignocellulosic Feedstock ◽  
High Concentrations ◽  
Draft Genome Sequencing

ABSTRACT Pichia membranifaciens KS47-1 is capable of growing on hydrolysate containing high concentrations of acetate and other growth inhibitors. To reveal the acetate-resistant associate genes of strain KS47-1, we present the 11.4-Mb draft genome sequence.

scholarly journals Draft Genome Sequence of Lactobacillus fermentum Lf2, an Exopolysaccharide-Producing Strain Isolated from Argentine Cheese

2018 ◽  
Vol 7 (18) ◽  
Author(s):  
Hugh M. B. Harris ◽  
Elisa C. Ale ◽  
Jorge A. Reinheimer ◽  
Ana G. Binetti ◽  
Paul W. O’Toole
Keyword(s):  
Genome Sequence ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
Protective Role ◽  
Lactobacillus Fermentum ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Serovar Typhimurium ◽  
High Concentrations

Lactobacillus fermentum Lf2, an Argentine cheese isolate, can produce high concentrations of exopolysaccharides (EPS). These EPS were shown to improve the texture and rheology of yogurt, as well as to play a protective role in mice exposed to Salmonella enterica serovar Typhimurium.

scholarly journals Draft Genome Sequence of an Extensively Drug-Resistant Salmonella enterica Serovar Typhi Strain from a Returned Traveler from Pakistan

2020 ◽  
Vol 9 (31) ◽  
Author(s):  
Samantha Hao ◽  
Tess Veuthey ◽  
Saharai Caldera ◽  
Paula Hayakawa Serpa ◽  
Barbara Haller ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Drug Resistant ◽  
Content Type ◽  
Salmonella Enterica Serovar Typhi ◽  
Extensively Drug Resistant

ABSTRACT We report a draft genome sequence of extensively drug-resistant (XDR) Salmonella enterica serotype Typhi isolated from a returned traveler from Pakistan who developed sepsis. Whole-genome sequencing revealed relatedness to a previously reported outbreak in Pakistan and identified the blaCTX-M-15 and qnrS resistance genes.

scholarly journals Draft Genome Sequence of a Mycobacterium porcinum Strain Isolated from a Pet Cat with Atypical Mycobacterial Panniculitis

2020 ◽  
Vol 9 (11) ◽  
Author(s):  
Anthony Mannion ◽  
Tina McCollester ◽  
Alexander Sheh ◽  
Zeli Shen ◽  
Hilda Holcombe ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Fast Growing

A fast-growing Mycobacterium species was cultured from draining, purulent lesions on the caudal abdomen of a 12-year-old male domestic long-haired cat. Whole-genome sequencing identified the organism as Mycobacterium porcinum.

scholarly journals Draft Genome Sequence of Clostridium sp. Strain chh4-2 Isolated from Human Feces

2018 ◽  
Vol 6 (8) ◽  
Author(s):  
Chien-Hsun Huang ◽  
Jong-Shian Liou ◽  
Chun-Lin Wang ◽  
Lina Huang
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Genome Assembly ◽  
Fecal Sample ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Human Feces ◽  
Content Type ◽  
Old Adult

ABSTRACT Here, we report the draft genome sequence of a Clostridium sp. strain isolated from a fecal sample of a 34-year-old adult male in Taiwan. This strain may represent a new bacterium, as suggested by a comparison based on whole-genome sequencing. The genome assembly comprised 6,089,737 bp, with a 45.63% G+C content.

scholarly journals Draft Genome Sequence of Aspergillus oryzae Strain 3.042

2012 ◽  
Vol 11 (9) ◽  
pp. 1178-1178 ◽  
Author(s):  
Guozhong Zhao ◽  
Yunping Yao ◽  
Wei Qi ◽  
Chunling Wang ◽  
Lihua Hou ◽  
...  
Keyword(s):  
Aspergillus Oryzae ◽  
Genome Sequence ◽  
Draft Genome ◽  
Soy Sauce ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Traditional Fermentation

ABSTRACTAspergillus oryzaeis the most important fungus for the traditional fermentation in China and is particularly important in soy sauce fermentation. We report the 36,547,279-bp draft genome sequence ofA. oryzae3.042 and compared it to the published genome sequence ofA. oryzaeRIB40.

scholarly journals Draft Genome Sequence of Pandoravirus japonicus Isolated from the Sabaishi River, Niigata, Japan

2021 ◽  
Vol 10 (19) ◽  
Author(s):  
Nao Hosokawa ◽  
Haruna Takahashi ◽  
Keita Aoki ◽  
Masaharu Takemura
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
The Third

ABSTRACT “Pandoraviridae” is a proposed family of the phylum Nucleocytoviricota. Its features include an amphora-shaped capsid and the largest genome among all viruses. We report the isolation and genome sequencing of a new member of this family, named Pandoravirus japonicus, the third strain discovered in Japan.

scholarly journals Draft Genome Sequence of Bacillus coagulans MA-13, a Thermophilic Lactic Acid Producer from Lignocellulose

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Martina Aulitto ◽  
Salvatore Fusco ◽  
Carl Johan Franzén ◽  
Andrea Strazzulli ◽  
Marco Moracci ◽  
...  
Keyword(s):  
Lactic Acid ◽  
Genome Sequence ◽  
Simultaneous Saccharification And Fermentation ◽  
Draft Genome ◽  
Bacillus Coagulans ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Lignocellulosic Feedstock ◽  
High Concentrations ◽  
Simultaneous Saccharification

Bacillus coagulans MA-13 is an efficient lactic acid producer which withstands high concentrations of the growth inhibitors formed during the pretreatment of lignocellulosic feedstock. This draft genome sequence is expected to pave the way toward the understanding of mechanisms responsible for the robustness of MA-13 during simultaneous saccharification and fermentation.

scholarly journals Draft Genome Sequence ofBacillus licheniformisS127, Isolated from a Sheep Udder Clinical Infection

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Ievgenia Ostrov ◽  
Noa Sela ◽  
Mor Freed ◽  
Nihaya Khateb ◽  
Miriam Kott-Gutkowski ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Bacillus Licheniformis ◽  
Dairy Products ◽  
Draft Genome ◽  
Dairy Industry ◽  
Genetic Data ◽  
Draft Genome Sequence ◽  
Clinical Infection ◽  
Draft Genome Sequencing

Bacillus licheniformisis a Gram-positive biofilm- and endospore-forming bacterium, which contaminates dairy products and can be pathogenic to humans. The draft genome sequencing forB. licheniformisstrain S127 is reported here, providing genetic data relevant to the ability of this strain to sustain its survival in the dairy industry.

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