scholarly journals Draft Genome Sequences of Colistin-Resistant and mcr-1.1-Carrying Escherichia coli Strains Isolated from Irrigation Water

2021 ◽  
Vol 10 (14) ◽  
Author(s):  
Nivin A. Nasser ◽  
David Mann ◽  
Shaoting Li ◽  
Xiangyu Deng ◽  
Issmat I. Kassem
Keyword(s):  
Escherichia Coli ◽  
Irrigation Water ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Colistin Resistance ◽  
Genome Sequences ◽  
Content Type ◽  
Therapeutic Uses ◽  
Sequence Types

ABSTRACT Colistin has been classified as a highest priority critically important antibiotic. However, the emergence of mobile colistin resistance (mcr) genes has threatened the therapeutic uses of colistin. Here, we report the draft genome sequences, antibiotic resistance genes, and sequence types (STs) of two multidrug-resistant and mcr-1.1-positive Escherichia coli strains isolated from irrigation water.

scholarly journals Draft Genome Sequences of Multidrug-Resistant and mcr-1.1-Harboring Escherichia coli Isolated from Drinking and Well Waters Used in Syrian Refugee Camps

2021 ◽  
Vol 10 (2) ◽  
Author(s):  
Nivin A. Nasser ◽  
Abdallah Alhaj Sulaiman ◽  
David Mann ◽  
Shaoting Li ◽  
Xiangyu Deng ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Refugee Camps ◽  
Syrian Refugees ◽  
Colistin Resistance ◽  
Genome Sequences ◽  
Content Type ◽  
Resistance Determinants ◽  
Susceptible Populations

ABSTRACT Resistance to colistin, a last-resort antibiotic, threatens the treatment of complicated infections, especially in susceptible populations such as Syrian refugees who live in makeshift camps. Two multidrug-resistant Escherichia coli strains with the plasmid-borne colistin resistance gene (mcr-1.1) were isolated from the waters used by refugees and sequenced to analyze antibiotic resistance determinants.

scholarly journals Draft Genome Sequences of Two Multidrug-Resistant Sequence Type 405 Escherichia coli Isolates without Clinical Infection

2021 ◽  
Vol 10 (31) ◽  
Author(s):  
Amanda Chamieh ◽  
Rita Zgheib ◽  
Sabah El-Sawalhi ◽  
Eid Azar ◽  
Jean-Marc Rolain
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Clinical Isolates ◽  
Clinical Infection ◽  
Genome Sequences ◽  
Content Type

We present the genome sequences of two carbapenemase-producing sequence type 405 Escherichia coli clinical isolates, strains Marseille-Q1950 and Marseille-Q1951. The isolates were obtained 1 month apart during the patient’s hospitalization in Lebanon, in May (Marseille-Q1950) and June (Marseille-Q1951) 2019. The genome sizes of strains Marseille-Q1950 and Marseille-Q1951 were 5,181,515 bp and 5,213,451 bp, respectively.

scholarly journals Draft Genome Sequences of Seven Extended-Spectrum β-Lactamase-Producing Escherichia coli Strains Isolated from New Zealand Waterways

2021 ◽  
Vol 10 (11) ◽  
Author(s):  
Sara A. Burgess ◽  
Margaux Francois ◽  
Anne C. Midwinter ◽  
Patrick J. Biggs
Keyword(s):  
Escherichia Coli ◽  
New Zealand ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Genome Sequences ◽  
Resistant Genotype ◽  
Content Type ◽  
Esbl Gene ◽  
Extended Spectrum ◽  
The Mean

ABSTRACT Draft genomes of seven extended-spectrum β-lactamase (ESBL)-producing Escherichia coli strains recovered from New Zealand waterways are described. The mean genome size was 5.1 Mb, with 4,724 coding sequences. All genomes contained the ESBL gene blaCTX-M, and one carried a plasmid-mediated AmpC gene, blaCMY-2. A multidrug-resistant genotype was detected in three isolates.

scholarly journals Draft Whole-Genome Sequences of Multidrug-Resistant Escherichia coli O157:H7 Strains Isolated from Feedlot Cattle Treated with Growth-Promoting Agents

2017 ◽  
Vol 5 (18) ◽  
Author(s):  
Muhammad A. Rehman ◽  
Catherine Carrillo ◽  
François Malouin ◽  
Moussa S. Diarra
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Feedlot Cattle ◽  
Genome Sequences ◽  
Antibiotic Resistant ◽  
Content Type ◽  
E Coli ◽  
Foodborne Outbreaks ◽  
Uremic Syndrome

ABSTRACT Enterohemorrhagic Escherichia coli serotype O157:H7 is a major cause of foodborne outbreaks and hemolytic-uremic syndrome. Here, we report the draft genome sequences of three antibiotic-resistant E. coli O157:H7 strains isolated from feedlot cattle. These draft genome sequences will aid in the development of sequence-based tools for the detection of virulence and antimicrobial resistance genotypes.

scholarly journals Draft Genome Sequences of Cefepime-Resistant and -Susceptible Escherichia coli Strains and Imipenem-Resistant and -Susceptible Pseudomonas aeruginosa Strains

2021 ◽  
Vol 10 (48) ◽  
Author(s):  
Kendra Batchelder ◽  
Liz Ward ◽  
Elsa Collins ◽  
Caitlin Miles ◽  
Stefania Palm ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Pseudomonas Aeruginosa ◽  
Antibiotic Resistance ◽  
Resistance Genes ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Genome Sequences ◽  
Content Type ◽  
E Coli

Draft genome sequences of Escherichia coli and Pseudomonas aeruginosa strains collected from clinical infections were used to determine the prevalence of newly emerging antibiotic resistance genes in Maine. Comparisons between cefepime-resistant and -susceptible E. coli strains and imipenem-resistant and -susceptible P. aeruginosa strains are being conducted.

scholarly journals Draft Genome Sequence of Multidrug-Resistant Escherichia coli NIVEDI-P44, Isolated from a Chicken Fecal Sample in Northeast India

2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Rituparna Tewari ◽  
Susweta Das Mitra ◽  
Sangita Das ◽  
Sudhir Jadhao ◽  
Gayatri Mishra ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Sequence ◽  
Fecal Sample ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Northeast India ◽  
Draft Genome Sequence ◽  
Multiple Antibiotic Resistance ◽  
Content Type

ABSTRACT We report here the draft genome sequence of a multidrug-resistant Escherichia coli strain (NIVEDI-P44) isolated from a chicken fecal sample. The estimated genome size is 4.76 Mb, with a G+C content of 50.65%. The genome harbors multiple antibiotic resistance genes, bla DHA-1 , mph (A), strA , strB , dfrA14 , sul-2 , tet (A), and qnrS1 .

scholarly journals Genome Sequences of Enteroinvasive Escherichia coli Sequence Type 6, 99, and 311 Strains Acquired in Asia Pacific

2019 ◽  
Vol 8 (36) ◽  
Author(s):  
Rajat Dhakal ◽  
Qinning Wang ◽  
Peter Howard ◽  
Vitali Sintchenko
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Laboratory Diagnosis ◽  
Research Community ◽  
Sequence Type ◽  
Asia Pacific ◽  
Genome Sequences ◽  
Content Type ◽  
Distinct Sequence ◽  
Sequence Types

Laboratory diagnosis of enteroinvasive Escherichia coli (EIEC) remains difficult and limits the availability of EIEC genomes to the research community. We report the draft genome sequences of three EIEC strains which represent three distinct sequence types and serotypes circulating in Asia Pacific and causing enterocolitis in humans.

scholarly journals Draft Genome Sequence Analysis of Multidrug-Resistant Escherichia coli Strains Isolated in 2013 from Humans and Chickens in Nigeria

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Poonam Sharma ◽  
Sushim K. Gupta ◽  
Eyitayo O. Adenipekun ◽  
John B. Barrett ◽  
Lari M. Hiott ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Sequence Analysis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Draft Genome Sequence ◽  
Genome Sequences ◽  
Genome Sequence Analysis ◽  
Content Type ◽  
Extended Spectrum

ABSTRACT Here, we present the draft genome sequences of nine multidrug-resistant Escherichia coli strains isolated from humans (n = 6) and chicken carcasses (n = 3) from Lagos, Nigeria, in 2013. Multiple extended-spectrum β-lactamase (ESBL) genes were identified in these isolates.

scholarly journals Draft Genome Sequences of Escherichia coli Strains FP2 and FP3, Isolated from the Canada Goose (Branta canadensis)

2018 ◽  
Vol 7 (9) ◽  
Author(s):  
Allison L. Denny ◽  
Susan E. Arruda
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Branta Canadensis ◽  
Canada Goose ◽  
Genome Sequences ◽  
Content Type

Draft genomes of two strains of Escherichia coli, FP2 and FP3, isolated from the feces of the Canada goose (Branta canadensis), were sequenced. Genome sizes were 5.26 Mb with a predicted G+C content of 50.54% (FP2) and 5.07 Mb with a predicted G+C content of 50.41% (FP3).

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