scholarly journals Genome Sequences of Enteroinvasive Escherichia coli Sequence Type 6, 99, and 311 Strains Acquired in Asia Pacific

2019 ◽  
Vol 8 (36) ◽  
Author(s):  
Rajat Dhakal ◽  
Qinning Wang ◽  
Peter Howard ◽  
Vitali Sintchenko
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Laboratory Diagnosis ◽  
Research Community ◽  
Sequence Type ◽  
Asia Pacific ◽  
Genome Sequences ◽  
Content Type ◽  
Distinct Sequence ◽  
Sequence Types

Laboratory diagnosis of enteroinvasive Escherichia coli (EIEC) remains difficult and limits the availability of EIEC genomes to the research community. We report the draft genome sequences of three EIEC strains which represent three distinct sequence types and serotypes circulating in Asia Pacific and causing enterocolitis in humans.

scholarly journals Draft Genome Sequences of Colistin-Resistant MCR-1-Producing Escherichia coli ST1850 and ST74 Strains Isolated from Commercial Chicken Meat

2017 ◽  
Vol 5 (20) ◽  
Author(s):  
Daniel F. Monte ◽  
Miriam R. Fernandes ◽  
Louise Cerdeira ◽  
Tiago A. de Souza ◽  
Andressa Mem ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Chicken Meat ◽  
Sequence Type ◽  
Genome Sequences ◽  
Content Type ◽  
Commercial Chicken

ABSTRACT We present here the draft genome sequences of two colistin-resistant mcr-1-carrying Escherichia coli strains belonging to sequence type 74 (ST74) and ST1850, isolated from commercial chicken meat in Brazil. Assembly of this draft genome resulted in 5,022,083 and 4,950,681 bp, respectively, revealing the presence of the IncX4 plasmid-mediated mcr-1 gene responsible for resistance to colistin.

scholarly journals Complete Genome Sequence of a Shiga Toxin-Producing Escherichia coli O26:H11 Strain (Sequence Type 21) and Two Draft Genome Sequences of Listeria monocytogenes Strains (Clonal Complex 1 [CC1] and CC59) Isolated from Fresh Produce in Germany

2020 ◽  
Vol 9 (49) ◽  
Author(s):  
Gregor Fiedler ◽  
Jan Kabisch ◽  
Erik Brinks ◽  
Sabrina Sprotte ◽  
Christina Boehnlein ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Listeria Monocytogenes ◽  
Shiga Toxin ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Clonal Complex ◽  
Draft Genome ◽  
Sequence Type ◽  
Genome Sequences ◽  
Content Type

ABSTRACT The complete genome sequence of a Shiga toxin-producing Escherichia coli (STEC) O26:H11 strain, MBT-5 (sequence type 21 [ST21], stx1a, stx2a, eae, ehxA), and two draft genome sequences of Listeria monocytogenes strains MBT-6 and MBT-7 belonging to the virulent sequence types 1 (ST1, clonal complex 1 [CC1]) and 59 (ST59, CC59), respectively, were determined. The strains were isolated in 2015 from ready-to-eat mixed greens in Germany.

scholarly journals Draft Genome Sequences of Two Multidrug-Resistant Sequence Type 405 Escherichia coli Isolates without Clinical Infection

2021 ◽  
Vol 10 (31) ◽  
Author(s):  
Amanda Chamieh ◽  
Rita Zgheib ◽  
Sabah El-Sawalhi ◽  
Eid Azar ◽  
Jean-Marc Rolain
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Clinical Isolates ◽  
Clinical Infection ◽  
Genome Sequences ◽  
Content Type

We present the genome sequences of two carbapenemase-producing sequence type 405 Escherichia coli clinical isolates, strains Marseille-Q1950 and Marseille-Q1951. The isolates were obtained 1 month apart during the patient’s hospitalization in Lebanon, in May (Marseille-Q1950) and June (Marseille-Q1951) 2019. The genome sizes of strains Marseille-Q1950 and Marseille-Q1951 were 5,181,515 bp and 5,213,451 bp, respectively.

scholarly journals Complete Genome Sequences of Sequence Type 71 (ST71) and ST97 Staphylococcus aureus Isolates from Bovine Milk

2018 ◽  
Vol 7 (5) ◽  
Author(s):  
Paul Cormican ◽  
Orla M. Keane
Keyword(s):  
Staphylococcus Aureus ◽  
Complete Genome ◽  
Draft Genome ◽  
Bovine Milk ◽  
Bovine Mastitis ◽  
Clinical Mastitis ◽  
Sequence Type ◽  
Genome Sequences ◽  
Content Type ◽  
Sequence Types

This is the announcement of draft genome sequences for Staphylococcus aureus strains belonging to sequence type 97 (ST97) and ST71. These sequence types are commonly associated with bovine mastitis, and the strains were isolated in Ireland in 2010 from the milk of cows with clinical mastitis.

scholarly journals Draft Genome Sequences of Colistin-Resistant and mcr-1.1-Carrying Escherichia coli Strains Isolated from Irrigation Water

2021 ◽  
Vol 10 (14) ◽  
Author(s):  
Nivin A. Nasser ◽  
David Mann ◽  
Shaoting Li ◽  
Xiangyu Deng ◽  
Issmat I. Kassem
Keyword(s):  
Escherichia Coli ◽  
Irrigation Water ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Colistin Resistance ◽  
Genome Sequences ◽  
Content Type ◽  
Therapeutic Uses ◽  
Sequence Types

ABSTRACT Colistin has been classified as a highest priority critically important antibiotic. However, the emergence of mobile colistin resistance (mcr) genes has threatened the therapeutic uses of colistin. Here, we report the draft genome sequences, antibiotic resistance genes, and sequence types (STs) of two multidrug-resistant and mcr-1.1-positive Escherichia coli strains isolated from irrigation water.

scholarly journals Draft Genome Sequences of Three Escherichia coli Sequence Type 131 Strains

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
Qingwen He ◽  
Jiangqing Huang ◽  
Bin Li
Keyword(s):  
Escherichia Coli ◽  
Global Health ◽  
Complete Genome ◽  
Draft Genome ◽  
Sequence Type ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Content Type ◽  
Global Health Issue ◽  
Fecal Isolate

Escherichia coli sequence type 131 (ST131) is an important global health issue nowadays and is responsible for many clinical infections. Here, we present the complete genome sequences of two ST131 clinical isolates and one ST131 fecal isolate.

scholarly journals Draft Genome Sequences of Escherichia coli Strains FP2 and FP3, Isolated from the Canada Goose (Branta canadensis)

2018 ◽  
Vol 7 (9) ◽  
Author(s):  
Allison L. Denny ◽  
Susan E. Arruda
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Branta Canadensis ◽  
Canada Goose ◽  
Genome Sequences ◽  
Content Type

Draft genomes of two strains of Escherichia coli, FP2 and FP3, isolated from the feces of the Canada goose (Branta canadensis), were sequenced. Genome sizes were 5.26 Mb with a predicted G+C content of 50.54% (FP2) and 5.07 Mb with a predicted G+C content of 50.41% (FP3).

scholarly journals Draft Genome Sequences of Historical Strains of Coxiella burnetii Isolated from Cow’s Milk and a Goat Placenta

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Paul A. Beare ◽  
Brendan M. Jeffrey ◽  
Craig A. Martens ◽  
Talima Pearson ◽  
Robert A. Heinzen
Keyword(s):  
Coxiella Burnetii ◽  
Draft Genome ◽  
Sequence Type ◽  
Cow’S Milk ◽  
Genome Sequences ◽  
Content Type ◽  
Cow's Milk

ABSTRACT Here, we report draft genome sequences of historical strains of Coxiella burnetii derived from cow’s milk and the placenta of a goat that had aborted. The California and Ohio milk strains display a different sequence type than do contemporary milk strains.

scholarly journals Draft Genome Sequences of Lysostaphin-Resistant (K07-204) and Lysostaphin-Susceptible (K07-561) Staphylococcus aureus Sequence Type 72 Strains Isolated from Patients in South Korea

2020 ◽  
Vol 9 (49) ◽  
Author(s):  
Nayab Batool ◽  
Kwan Soo Ko ◽  
Akhilesh Kumar Chaurasia ◽  
Kyeong Kyu Kim
Keyword(s):  
Staphylococcus Aureus ◽  
South Korea ◽  
Genome Sequencing ◽  
Draft Genome ◽  
Sequence Type ◽  
Genome Sequences ◽  
Content Type ◽  
Subtractive Genomics ◽  
Draft Genome Sequencing ◽  
Different Levels

ABSTRACT Methicillin-resistant Staphylococcus aureus sequence type 72 (ST72) is prevalent in South Korea and has shown resistance to multiple antimicrobials. ST72 isolates display different levels of resistance to the antistaphylococcal lysostaphin. Draft genome sequencing of ST72 human isolates exhibiting lysostaphin resistance or susceptibility was performed to better understand the mechanism of lysostaphin resistance using subtractive genomics.

scholarly journals Draft Genome Sequence of an Escherichia coli Sequence Type 410 Isolate Harboring blaNDM-5 Genes with gyrA and parE Mutations, Isolated from Urine Culture in China

2019 ◽  
Vol 8 (50) ◽  
Author(s):  
Junwei Huang ◽  
Shanshan Ma ◽  
Qian Yu ◽  
Miao Fu ◽  
Lingli Shao
Keyword(s):  
Escherichia Coli ◽  
High Risk ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Urine Culture ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Content Type

Escherichia coli sequence type 410 (ST410) is now an international high-risk clone and is responsible for a large number of clinical infections. Here, we report the draft genome sequence of an ST410 clinical isolate harboring multiple bla NDM-5 genes that was obtained from urine culture in China.

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