scholarly journals Draft Genome Sequences of Seven Extended-Spectrum β-Lactamase-Producing Escherichia coli Strains Isolated from New Zealand Waterways

2021 ◽  
Vol 10 (11) ◽  
Author(s):  
Sara A. Burgess ◽  
Margaux Francois ◽  
Anne C. Midwinter ◽  
Patrick J. Biggs
Keyword(s):  
Escherichia Coli ◽  
New Zealand ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Genome Sequences ◽  
Resistant Genotype ◽  
Content Type ◽  
Esbl Gene ◽  
Extended Spectrum ◽  
The Mean

ABSTRACT Draft genomes of seven extended-spectrum β-lactamase (ESBL)-producing Escherichia coli strains recovered from New Zealand waterways are described. The mean genome size was 5.1 Mb, with 4,724 coding sequences. All genomes contained the ESBL gene blaCTX-M, and one carried a plasmid-mediated AmpC gene, blaCMY-2. A multidrug-resistant genotype was detected in three isolates.

scholarly journals Draft Genome Sequence Analysis of Multidrug-Resistant Escherichia coli Strains Isolated in 2013 from Humans and Chickens in Nigeria

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Poonam Sharma ◽  
Sushim K. Gupta ◽  
Eyitayo O. Adenipekun ◽  
John B. Barrett ◽  
Lari M. Hiott ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Sequence Analysis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Draft Genome Sequence ◽  
Genome Sequences ◽  
Genome Sequence Analysis ◽  
Content Type ◽  
Extended Spectrum

ABSTRACT Here, we present the draft genome sequences of nine multidrug-resistant Escherichia coli strains isolated from humans (n = 6) and chicken carcasses (n = 3) from Lagos, Nigeria, in 2013. Multiple extended-spectrum β-lactamase (ESBL) genes were identified in these isolates.

scholarly journals Draft Genome Sequences of Two Multidrug-Resistant Sequence Type 405 Escherichia coli Isolates without Clinical Infection

2021 ◽  
Vol 10 (31) ◽  
Author(s):  
Amanda Chamieh ◽  
Rita Zgheib ◽  
Sabah El-Sawalhi ◽  
Eid Azar ◽  
Jean-Marc Rolain
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Clinical Isolates ◽  
Clinical Infection ◽  
Genome Sequences ◽  
Content Type

We present the genome sequences of two carbapenemase-producing sequence type 405 Escherichia coli clinical isolates, strains Marseille-Q1950 and Marseille-Q1951. The isolates were obtained 1 month apart during the patient’s hospitalization in Lebanon, in May (Marseille-Q1950) and June (Marseille-Q1951) 2019. The genome sizes of strains Marseille-Q1950 and Marseille-Q1951 were 5,181,515 bp and 5,213,451 bp, respectively.

scholarly journals Full-Length Nucleotide Sequences ofmcr-1-Harboring Plasmids Isolated from Extended-Spectrum-β-Lactamase-Producing Escherichia coli Isolates of Different Origins

2016 ◽  
Vol 60 (9) ◽  
pp. 5589-5591 ◽  
Author(s):  
Katrin Zurfluh ◽  
Jochen Klumpp ◽  
Magdalena Nüesch-Inderbinen ◽  
Roger Stephan
Keyword(s):  
Escherichia Coli ◽  
Heavy Metal ◽  
Heavy Metal Resistance ◽  
Multidrug Resistant ◽  
Metal Resistance ◽  
Content Type ◽  
Esbl Gene ◽  
Extended Spectrum ◽  
Different Origins ◽  
First Time

ABSTRACTHere, we present the full sequences of threemcr-1-carrying plasmids isolated from extended-spectrum-β-lactamase (ESBL)-producingEscherichia coli. The plasmids belong to three different replicon types and are 34,640 bp, 209,401 bp, and 247,885 bp in size. We describe for the first time a composite transposon containingmcr-1localized on a multidrug-resistant (MDR) IncHI2 plasmid harboring additional determinants of resistance to six different classes of antibiotics, including the ESBL geneblaCTX-M-1, and heavy metal resistance.

scholarly journals Draft Whole-Genome Sequences of Multidrug-Resistant Escherichia coli O157:H7 Strains Isolated from Feedlot Cattle Treated with Growth-Promoting Agents

2017 ◽  
Vol 5 (18) ◽  
Author(s):  
Muhammad A. Rehman ◽  
Catherine Carrillo ◽  
François Malouin ◽  
Moussa S. Diarra
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Feedlot Cattle ◽  
Genome Sequences ◽  
Antibiotic Resistant ◽  
Content Type ◽  
E Coli ◽  
Foodborne Outbreaks ◽  
Uremic Syndrome

ABSTRACT Enterohemorrhagic Escherichia coli serotype O157:H7 is a major cause of foodborne outbreaks and hemolytic-uremic syndrome. Here, we report the draft genome sequences of three antibiotic-resistant E. coli O157:H7 strains isolated from feedlot cattle. These draft genome sequences will aid in the development of sequence-based tools for the detection of virulence and antimicrobial resistance genotypes.

scholarly journals Draft Genome Sequences of Colistin-Resistant and mcr-1.1-Carrying Escherichia coli Strains Isolated from Irrigation Water

2021 ◽  
Vol 10 (14) ◽  
Author(s):  
Nivin A. Nasser ◽  
David Mann ◽  
Shaoting Li ◽  
Xiangyu Deng ◽  
Issmat I. Kassem
Keyword(s):  
Escherichia Coli ◽  
Irrigation Water ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Colistin Resistance ◽  
Genome Sequences ◽  
Content Type ◽  
Therapeutic Uses ◽  
Sequence Types

ABSTRACT Colistin has been classified as a highest priority critically important antibiotic. However, the emergence of mobile colistin resistance (mcr) genes has threatened the therapeutic uses of colistin. Here, we report the draft genome sequences, antibiotic resistance genes, and sequence types (STs) of two multidrug-resistant and mcr-1.1-positive Escherichia coli strains isolated from irrigation water.

scholarly journals Draft Whole-Genome Sequences of Three Diarrheagenic Escherichia coli Strains Isolated from Farmed Deer in New Zealand

2018 ◽  
Vol 6 (16) ◽  
pp. e00300-18
Author(s):  
A. Springer Browne ◽  
Patrick J. Biggs ◽  
Alice Elliott ◽  
Patricia Jaros ◽  
Nigel P. French ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
New Zealand ◽  
Cervus Elaphus ◽  
Red Deer ◽  
Draft Genome ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
E Coli ◽  
Diarrheagenic Escherichia Coli

ABSTRACT Escherichia coli bacteria commonly colonize the gastrointestinal tracts of farmed ruminants. Cattle are a well-recognized reservoir of zoonotic E. coli; we report here, however, the draft genome sequences of three diarrheagenic E. coli strains isolated from farmed red deer (Cervus elaphus) in the Manawatu region of New Zealand.

scholarly journals Draft Genome Sequences of Multidrug-Resistant and mcr-1.1-Harboring Escherichia coli Isolated from Drinking and Well Waters Used in Syrian Refugee Camps

2021 ◽  
Vol 10 (2) ◽  
Author(s):  
Nivin A. Nasser ◽  
Abdallah Alhaj Sulaiman ◽  
David Mann ◽  
Shaoting Li ◽  
Xiangyu Deng ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Refugee Camps ◽  
Syrian Refugees ◽  
Colistin Resistance ◽  
Genome Sequences ◽  
Content Type ◽  
Resistance Determinants ◽  
Susceptible Populations

ABSTRACT Resistance to colistin, a last-resort antibiotic, threatens the treatment of complicated infections, especially in susceptible populations such as Syrian refugees who live in makeshift camps. Two multidrug-resistant Escherichia coli strains with the plasmid-borne colistin resistance gene (mcr-1.1) were isolated from the waters used by refugees and sequenced to analyze antibiotic resistance determinants.

scholarly journals Draft Genome Sequences of Escherichia coli Strains FP2 and FP3, Isolated from the Canada Goose (Branta canadensis)

2018 ◽  
Vol 7 (9) ◽  
Author(s):  
Allison L. Denny ◽  
Susan E. Arruda
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Branta Canadensis ◽  
Canada Goose ◽  
Genome Sequences ◽  
Content Type

Draft genomes of two strains of Escherichia coli, FP2 and FP3, isolated from the feces of the Canada goose (Branta canadensis), were sequenced. Genome sizes were 5.26 Mb with a predicted G+C content of 50.54% (FP2) and 5.07 Mb with a predicted G+C content of 50.41% (FP3).

scholarly journals Draft Genome Sequences of Two Enterobacter cloacae subsp. cloacae Strains Isolated from Australian Hematology Patients with Bacteremia

2017 ◽  
Vol 5 (33) ◽  
Author(s):  
Lex E. X. Leong ◽  
David Shaw ◽  
Lito Papanicolas ◽  
Diana Lagana ◽  
Ivan Bastian ◽  
...  
Keyword(s):  
Gut Microbiota ◽  
Draft Genome ◽  
Enterobacter Cloacae ◽  
Opportunistic Pathogen ◽  
Healthy Individuals ◽  
Genome Sequences ◽  
Content Type ◽  
Extended Spectrum ◽  
Genes Encoding

ABSTRACT Enterobacter cloacae is a common member of the gut microbiota in healthy individuals. However, it is also an opportunistic pathogen, capable of causing bacteremia. We report the draft genomes of two Enterobacter cloacae subspecies cloacae strains isolated from hematology patients with bacteremia. Both isolates carry genes encoding extended-spectrum β-lactamases.

scholarly journals Draft Genome Sequences of 12 Clinical and Environmental Methicillin-Resistant Staphylococcus pseudintermedius Strains Isolated from a Veterinary Teaching Hospital in Washington State

2018 ◽  
Vol 6 (15) ◽  
pp. e00290-18
Author(s):  
Devendra H. Shah ◽  
Lisa P. Jones ◽  
Narayan Paul ◽  
Margaret A. Davis
Keyword(s):  
Teaching Hospital ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Washington State ◽  
Nosocomial Transmission ◽  
Whole Genome ◽  
Genome Sequences ◽  
Staphylococcus Pseudintermedius ◽  
Methicillin Resistant ◽  
Content Type

ABSTRACT Methicillin-resistant Staphylococcus pseudintermedius (MRSP) is a globally emergent multidrug-resistant pathogen of dogs associated with nosocomial transmission in dogs and with potential zoonotic impacts. Here, we report the draft whole-genome sequences of 12 hospital-associated MRSP strains and their resistance genotypes and phenotypes.

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