Ascertaining maternal and paternal lineage within Musa by chloroplast and mitochondrial DNA RFLP analyses

Genome ◽  
2002 ◽  
Vol 45 (4) ◽  
pp. 679-692 ◽  
Author(s):  
F Carreel ◽  
D Gonzalez de Leon ◽  
P Lagoda ◽  
C Lanaud ◽  
C Jenny ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
Chloroplast Dna ◽  
The Philippines ◽  
Musa Acuminata ◽  
Maternal Transmission ◽  
Musa Balbisiana ◽  
Molecular Analyses ◽  
Paternal Lineage ◽  
Wild Accessions

In banana, the maternal transmission of chloroplast DNA and paternal transmission of the mitochondrial DNA provides an exceptional opportunity for studying the maternal and paternal lineage of clones. In the present study, RFLP combined with hybridization of heterologous mitochondrial and chloroplastic probes have been used to characterize 71 wild accessions and 131 diploid and 103 triploid cultivated clones. In additon to Musa acuminata and Musa balbisiana, other species from the four Musa sections were studied to investigate their contribution to the origin of cultivated bananas. These molecular analyses enable the classification of the Musa complex to be discussed. Results ascertain relationships among and between the wild accessions and the mono- and interspecific diploid and triploid bananas, particularly for the acuminata genome. Parthenocarpic varieties are shown to be linked to M. acuminata banksii and M. acuminata errans, thus suggesting that the first center of domestication was in the Philippines – New Guinea area.Key words: Musa, RFLP, cpDNA, mtDNA, lineage.

STUDY OF DECORATIVE VARIETY IN GORONTALO KARAWO FABRIC IN AESTHETIC AND SYMBOLIC ELEMENTS

ARTic ◽  
2019 ◽  
Vol 3 ◽  
pp. 121-134
Author(s):  
Apsari Dj Hasan
Keyword(s):  
Manufacturing Process ◽  
The Philippines ◽  
Aesthetic Theory ◽  
Cultural Meanings ◽  
Aesthetic Value ◽  
Aesthetic Form ◽  
Decorative Motifs ◽  
Symbolic Meanings ◽  
The Aesthetic

This study aims to examine the decorative types of Gorontalo karawo fabrics in aesthetic and symbolic elements. Researchers want to know as made in the research design, aspects that are present in the decoration of fabrics in aesthetic and symbolic elements. This study uses a number of related theories to get results, and as a determinant, the authors use aesthetic theory, as well as historical approaches. With this theoretical basis, the author seeks to describe the aesthetic aspects and symbolic meanings that exist in Gorontalo karawo fabric. Through the data collection of the chosen motif and provide a classification of motives, the part is used as a reference for research material. The results showed that Gorontalo filigree had an aesthetic value consisting of unity formed from the overall decorative motifs displayed, complexity formed by complexity in the manufacturing process, and intensity of seriousness in the manufacturing process or the impression displayed on the filigree motif. The aesthetic form also reflects the diversity of meanings for communication, such as the symbol of a leader with his noble instincts, a symbol of cultural cooperation, which is worth maintaining, and ideas about nature conservation. This research proves that the decoration in Gorontalo filigree cloth (karawo) does not only act as a visual value, but also as a communication of cultural meanings and social status. Of all these distinctive motifs show a relationship between humans and humans and humans with nature. The influence of culture from the Philippines is also known to have a strong influence on the emergence of the Gorontalo filigree namely manila filigree.

HaploGrep: a fast and reliable algorithm for automatic classification of mitochondrial DNA haplogroups

2010 ◽  
Vol 32 (1) ◽  
pp. 25-32 ◽  
Author(s):  
Anita Kloss-Brandstätter ◽  
Dominic Pacher ◽  
Sebastian Schönherr ◽  
Hansi Weissensteiner ◽  
Robert Binna ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
Automatic Classification

Philippinozercon, a new genus of Heterozerconidae (Parasitiformes: Mesostigmata), with description of all active instars

Zootaxa ◽  
2018 ◽  
Vol 4540 (1) ◽  
pp. 7
Author(s):  
BEVERLY S. GERDEMAN ◽  
RUFINO C. GARCIA ◽  
ANDREW HERCZAK ◽  
HANS KLOMPEN
Keyword(s):  
Type Species ◽  
New Genus ◽  
The Philippines ◽  
Junior Synonym ◽  
Temperate Species ◽  
Oriental Region ◽  
The Family

The generic classification of millipede associated Heterozerconidae in the Oriental region is revised. The genus Allozercon Vitzthum is re-diagnosed and Asioheterozercon Fain is designated as an subjective junior synonym of Allozercon. Philippinozercon gen. nov., with the type species P. makilingensis sp. nov., is described for all instars. This genus may be endemic for the Philippines, but is quite widespread in that country. All immature instars are described, making this the second species of Heterozerconidae known for all instars. The morphology of the immatures is compared with that of immatures of the temperate species Narceoheterozercon ohioensis and unnamed species from Brazil and Thailand. All immatures were collected from millipede frass and litter, never from millipedes. Adults are associated with millipedes in the family Trigoniulidae (Spirobolida). 

Begonia balangcodiae sp. nov. from northern Luzon, the Philippines and its natural hybrid with B. crispipila, B. × kapangan nothosp. nov.

Phytotaxa ◽  
2019 ◽  
Vol 407 (1) ◽  
pp. 5-21 ◽  
Author(s):  
SHIH-HUI LIU ◽  
YU-HSIN TSENG ◽  
DIAITI ZURE ◽  
ROSARIO RIVERA RUBITE ◽  
TEODORA D. BALANGCOD ◽  
...  
Keyword(s):  
New Species ◽  
Field Survey ◽  
The Philippines ◽  
Southeast Asian ◽  
Herbarium Specimens ◽  
Natural Hybrid ◽  
Paternal Genome ◽  
Molecular Analyses ◽  
Maternal Genome

The pantropically distributed Begonia (Begoniaceae) is one of the most species-rich genera. Philippines is one of the diversity centers of Southeast Asian Begonia. In our 2012 field survey, three species of Begonia section Petermannia were collected in Barangay Sagubo, Municipality of Kapangan, Province of Benguet in the northern Luzon Island, Philippines. Our study on literatures and herbarium specimens suggests that these collections consist of B. crispipila, an unknown new species hereby we named B. balangcodiae, and the natural hybrid between them. Molecular analyses confirm that the former contributed the maternal genome while the latter provided the paternal genome. We name the natural hybrid B. × kapangan, which is the first natural hybrid reported in sect. Petermannia.

scholarly journals Can exports be used as an indicator of technological capabilities of countries?

Geografie ◽  
2015 ◽  
Vol 120 (3) ◽  
pp. 314-329 ◽  
Author(s):  
Jana Vlčková
Keyword(s):  
Emerging Economies ◽  
Value Added ◽  
The Philippines ◽  
Reliable Indicator ◽  
Technological Capabilities ◽  
The Past ◽  
Product Classification ◽  
Innovative Capabilities ◽  
The Eu

During the past 30 years, many emerging economies, especially China, have strengthened their technological and innovative capabilities. Have these countries started to threaten the position of traditional technological leaders? This paper examines whether technological capabilities of an economy can be evaluated based on the goods each economy exports (EXPY). Detailed product classification of exports to the EU in the period between 1984 and 2009 form the underlying data. Further, other data and studies are used to assess the reliability of EXPY. Results show that many emerging economies have significantly increased their technological sophistication; among them exports of Mexico, the Philippines and Malaysia are technologically the most sophisticated. These economies have significant share of foreign value added embodied in exports, though. Therefore, EXPY based on gross exports is not a reliable indicator of technological capabilities of countries and this indicator needs to be combined with other data.

scholarly journals Myxomycetes of Coron Island and additions to the Myxomycetes of Palawan group of islands in the Philippines

Karstenia ◽  
2020 ◽  
pp. 157-167
Author(s):  
Sittie Aisha B. Macabago ◽  
Thomas Edison E. dela Cruz ◽  
Steven L. Stephenson
Keyword(s):  
Leaf Litter ◽  
New Record ◽  
The Philippines ◽  
Annotated Checklist

The main objective of the research reported herein is to present an annotated checklist generated from the first survey of myxomycetes in the limestone forests of Coron Island in the province of Palawan, Philippines. A total of 25 morphotaxa were identified from specimens isolated in the laboratory from samples of ground leaf litter, twigs, and vines (lianas) collected from five sites along the coasts and inland forests of Coron Island. Among the identified taxa one (<em>Badhamia macrocarpa</em>) was a new record for the country, while another was temporarily assigned to the genus <em>Perichaena</em> (Trichiida: Trichiidae) until the proper classification of the specimen could be determined. In addition, the present study brings the updated total number of records of myxomycetes for the Palawan group of islands to 56 morphospecies.

Redescription of Mastigias papua (Scyphozoa, Rhizostomeae) with designation of a neotype and recognition of two additional species

Zootaxa ◽  
2018 ◽  
Vol 4457 (4) ◽  
pp. 520 ◽  
Author(s):  
MARIANA ROCHA DE SOUZA ◽  
MICHAEL N DAWSON
Keyword(s):  
Pacific Islands ◽  
Parallel Evolution ◽  
Morphological Characters ◽  
The Philippines ◽  
Type Specimens ◽  
Additional Species ◽  
Evolutionary Patterns ◽  
Molecular Analyses ◽  
Taxonomic Approach ◽  
Patterns And Processes

Mastigias, the ‘golden’ or ‘spotted’ jellyfish, is distributed throughout the Indo-Pacific. Specimens are identified routinely as Mastigias papua, although eight species were described historically, and molecular analyses evince at least three phylogenetic species. Understanding species diversity in Mastigias has become a priority because of its growing relevance in studies of boom-bust dynamics related to environmental change, cryptic species, local adaptation, parallel evolution, and peripatric speciation. However, species delimitation and identification are inhibited by a dearth of type specimens for most species, including M. papua. We address these issues by resampling Mastigias from the type locality in Waigeo, West Papua, as well as in the Philippines, and by comparing cytochrome c oxidase subunit I and up to 34 morphological characters of 268 Mastigias specimens from surrounding regions in the Indo-Pacific. We also gathered data from the historical descriptions of the eight species of Mastigias to estimate the identity of the two other currently revealed clades. Using this integrative taxonomic approach, we re-describe Mastigias papua as endemic to the tropical western Pacific islands (including Papua, Palau, Enewetak) and designate a neotype for the species. Additionally, based on morphological similarity and geographic overlap, we identified a second clade most probably as M. albipunctatus (from Japan, Komodo, Berau and Philippines) and a third clade tentatively as either M. andersoni or M. ocellatus. This study highlights the benefits of combining molecular analyses, samples from type locations, traditional descriptions and statistical analyses of morphological variation in systematic studies, and the concomitant potential of such studies to increase understanding of evolutionary patterns and processes in Scyphozoa.

scholarly journals SPInDel Analysis of the Non-Coding Regions of cpDNA as a More Useful Tool for the Identification of Rye (Poaceae: Secale) Species

2020 ◽  
Vol 21 (24) ◽  
pp. 9421
Author(s):  
Lidia Skuza ◽  
Ewa Filip ◽  
Izabela Szućko ◽  
Jan Bocianowski
Keyword(s):  
Mitochondrial Dna ◽  
Molecular Markers ◽  
Related Species ◽  
Economic Importance ◽  
Closely Related Species ◽  
Coding Sequences ◽  
Coding Regions ◽  
Genomic Regions ◽  
Tribe Triticeae

Secale is a small but very diverse genus from the tribe Triticeae (family Poaceae), which includes annual, perennial, self-pollinating and open-pollinating, cultivated, weedy and wild species of various phenotypes. Despite its high economic importance, classification of this genus, comprising 3–8 species, is inconsistent. This has resulted in significantly reduced progress in the breeding of rye which could be enriched with functional traits derived from wild rye species. Our previous research has suggested the utility of non-coding sequences of chloroplast and mitochondrial DNA in studies on closely related species of the genus Secale. Here we applied the SPInDel (Species Identification by Insertions/Deletions) approach, which targets hypervariable genomic regions containing multiple insertions/deletions (indels) and exhibiting extensive length variability. We analysed a total of 140 and 210 non-coding sequences from cpDNA and mtDNA, respectively. The resulting data highlight regions which may represent useful molecular markers with respect to closely related species of the genus Secale, however, we found the chloroplast genome to be more informative. These molecular markers include non-coding regions of chloroplast DNA: atpB-rbcL and trnT-trnL and non-coding regions of mitochondrial DNA: nad1B-nad1C and rrn5/rrn18. Our results demonstrate the utility of the SPInDel concept for the characterisation of Secale species.

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