Multivariate analysis of the hybrid Phoxinus eos × Phoxinus neogaeus (Pisces: Cyprinidae): reevaluation of univariate analysis

1989 ◽  
Vol 67 (7) ◽  
pp. 1637-1641
Author(s):  
Gerard R. Joswiak ◽  
John G. New

Morphological data from two species of minnows, Phoxinus eos and Phoxinus neogaeus, and their hybrids (Pisces: Cyprinidae), previously analyzed by univariate methods, were reanalyzed by multivariate methods. Stepwise discriminant and principal component analyses were conducted on a data set of 14 morphometric measurements from 172 specimens. All of the Phoxinus neogaeus and 87% of both hybrids and Phoxinus eos were correctly classified on functions derived from six discriminating variables. Principal component analysis resulted in the extraction of two factors that explained 90% of the variation in the data set. Mean scores on the first factor were significantly different for P. eos, while on the second factor the mean score for P. neogaeus differed from those of the other two groups. Possible causes of variation in the morphology in the Phoxinus hybrids, from diploidy, tripoloidy, and mosaicism, are discussed.

1985 ◽  
Vol 105 (1) ◽  
pp. 97-122 ◽  
Author(s):  
F. V. Widdowson ◽  
A. Penny ◽  
R. J. Gutteridge ◽  
R. J. Darby ◽  
M. V. Hewitt

SUMMARYFrom 1980 to 1983 factorial experiments at Saxmundham were made on winter wheat following beans, so as to minimize losses from foot and root rots and increase potential yields. All tested seed-bed N, and amounts and times of application of N in spring, both with and without sprays intended to limit losses from aphids and from diseases. The tests were made on one semi-dwarf variety in 1980 and on two contrasting varieties from 1981 to 1983. In 1982 and 1983 a comparison was made between wheat following beans and wheat following wheat; all treatments were applied cumulatively to the two successive wheat crops.In 1980 and in 1981 N given in March greatly increased the number of shoots in April but had little effect on the final number of ears. Yields of grain were greatly increased by N given during April and by sequential sprays with fungicides and aphicide; these two factors interacted so that responses to N were larger with the sprays than without. Yield responses to seed-bed N, although small, were greater than the benefits from applying divided instead of single N dressings in spring. The number of ears was greatly increased by increasing the amount of N given in April, but only slightly by any of the other treatments. The weight of 1000 grains was greatly increased by the sprays of aphicide and fungicides and was decreased by N in 1981, but not in 1980. Largest yields of grain were 10·14 t/ha in 1980 and 10·91 t/ha in 1981 when N was given in spring at 160 and 200 kg/ha respectively, and the crops were sprayed with pesticides.In 1982 and 1983 N applied in March again greatly increased the number of shoots in April, but not the final number of ears. Yields of grain were larger after beans than after wheat, mainly because the number of ears and the weight of 1000 grains were greater. This may have been because take-all (Gaeumannomyces graminisvar. tritici) was more severe where wheat followed wheat. Previous cropping also interacted with variety; Avalon yielded slightly less than Norman where take-all was slight but much less where take-all was severe. Where N was given the mean loss in yield from growing Avalon rather than Norman in the 2 years was 2·47 t/ha after wheat and 0·37 t/ha after beans. The take-all disease ratings of Norman and Avalon after wheat were 132 and 197 respectively. Yields of grain were greatly increased by N given during April, especially of wheat following wheat and where it was protected with sprays; then the mean yield was only 2·79 t/ha without N but 8·78 with 235 kg N/ha. Where wheat followed beans, yields were 6·89 t/ha without N and 11·07 with 175 kg N/ha. Applying N to the seed bed increased yields slightly, and again by more than by dividing the dressing of N in spring. The number of ears was greatly increased by N in spring and a little by all the other factors that increased grain yield. The weight of 1000 grains was increased greatly by the sprays of aphicide and fungicides, was decreased by N, and was larger for Norman than for Avalon.In 1980–1, after beans, the mean amounts of N removed by the grain (where aphicide and fungicides were given) ranged from 81 kg/ha without N fertilizer to 167 where most N was given. In 1982–3 comparable values ranged from 86 kg N/ha to 191 where wheat followed beans and from 35 kg N/ha to 168 where wheat followed wheat.


Author(s):  
J. O. Agbolade ◽  
T. P. Olakunle ◽  
K. M. Popoola ◽  
J. A. Idowu ◽  
A. I. Isiaka ◽  
...  

In response to the paucity of information challenge on the neglected and underutilized legumes, this paper explored pods and seeds morphological data of the twenty-four accessions of these crops with a view to establishing the occurrence of genetic variability and diversity analysis among the studied taxa. Twenty-four accessions of neglected and underutilized legumes (NULs) obtained from International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria were assessed for genetic variability and diversity analysis through Pod and seed morphological characters. Each accession was planted into plot of 5 ridges of 5 meter long, spaced 1 meter apart and replicated three times at the teaching and research farm of the Federal University Oye Ekiti, Ekiti State, Nigeria. Descriptive statistics was employed to evaluate differences in the mean values of the accessions while discriminatory traits among accessions were identified by Principal Component Analysis (PCA). Similarities among the studied plants were assessed by cluster analysis. The first two principal component axes explained 72% of the total variation. Pod length, pod width and 100-seed weight were traits that contributed most of the variations in the legume accessions. There was a display of intra-species similarities and inter-specific genetic diversity among the studied accessions.


2001 ◽  
Vol 19 (3) ◽  
pp. 359-365 ◽  
Author(s):  
J. L. Innis ◽  
F. A. Phillips ◽  
G. B. Burns ◽  
P. A. Greet ◽  
W. J. R. French ◽  
...  

Abstract. We present observations of the hydroxyl (6–2) airglow lines from ~ 87 km altitude obtained at Davis station, Antarctica, in the austral winter of 1999. Nine nights of observations were made of the P-branch near λ840 nm with a Czerny-Turner scanning spectrometer (CTS); at the same time, high-resolution Fabry-Perot Spectrometer (FPS) spectra were collected of the Q1(1) doublet at λ834 nm. Rotational temperatures were determined from the CTS observations, while Doppler temperatures were derived from the line-widths of the FPS Q1(1) spectra. Absolute temperatures determined by these methods are uncertain by ~ 2 and ~ 20 K, respectively. For the comparison we set the value of the reflective finesse of the FPS at λ834 nm so the mean FPS temperature from one night of simultaneous data was equal to that from the CTS, and then looked at the measured variations in each data set for the other eight nights. Both instruments show the upper mesosphere temperature to vary in a similar manner to within the observational errors of the measurements, implying an equivalence of the rotational and Doppler temperatures. We believe that this is the first published simultaneous, same-site, comparison of rotational and Doppler temperatures from the OH emission. Key words. Atmospheric composition and structure (airglow and aurora; pressure density and temperature; instruments and techniques)


PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e11843
Author(s):  
Carlos Prieto ◽  
Christophe Faynel ◽  
Robert Robbins ◽  
Axel Hausmann

Background With about 1,000 species in the Neotropics, the Eumaeini (Theclinae) are one of the most diverse butterfly tribes. Correct morphology-based identifications are challenging in many genera due to relatively little interspecific differences in wing patterns. Geographic infraspecific variation is sometimes more substantial than variation between species. In this paper we present a large DNA barcode dataset of South American Lycaenidae. We analyze how well DNA barcode BINs match morphologically delimited species. Methods We compare morphology-based species identifications with the clustering of molecular operational taxonomic units (MOTUs) delimitated by the RESL algorithm in BOLD, which assigns Barcode Index Numbers (BINs). We examine intra- and interspecific divergences for genera represented by at least four morphospecies. We discuss the existence of local barcode gaps in a genus by genus analysis. We also note differences in the percentage of species with barcode gaps in groups of lowland and high mountain genera. Results We identified 2,213 specimens and obtained 1,839 sequences of 512 species in 90 genera. Overall, the mean intraspecific divergence value of CO1 sequences was 1.20%, while the mean interspecific divergence between nearest congeneric neighbors was 4.89%, demonstrating the presence of a barcode gap. However, the gap seemed to disappear from the entire set when comparing the maximum intraspecific distance (8.40%) with the minimum interspecific distance (0.40%). Clear barcode gaps are present in many genera but absent in others. From the set of specimens that yielded COI fragment lengths of at least 650 bp, 75% of the a priori morphology-based identifications were unambiguously assigned to a single Barcode Index Number (BIN). However, after a taxonomic a posteriori review, the percentage of matched identifications rose to 85%. BIN splitting was observed for 17% of the species and BIN sharing for 9%. We found that genera that contain primarily lowland species show higher percentages of local barcode gaps and congruence between BINs and morphology than genera that contain exclusively high montane species. The divergence values to the nearest neighbors were significantly lower in high Andean species while the intra-specific divergence values were significantly lower in the lowland species. These results raise questions regarding the causes of observed low inter and high intraspecific genetic variation. We discuss incomplete lineage sorting and hybridization as most likely causes of this phenomenon, as the montane species concerned are relatively young and hybridization is probable. The release of our data set represents an essential baseline for a reference library for biological assessment studies of butterflies in mega diverse countries using modern high-throughput technologies an highlights the necessity of taxonomic revisions for various genera combining both molecular and morphological data.


Phytotaxa ◽  
2017 ◽  
Vol 317 (1) ◽  
pp. 29
Author(s):  
XIAO-FENG JIN

In this paper, Carex chungii and other five names at species rank, plus one variety and one form, all from of C. sect. Mitratae, were revised. They constitute a group of morphologically very similar taxa, difficult to tell apart. Our study was based on literature survey, fieldwork, herbarium specimens, statistical analysis of morphological characters and SEM observations of achenes and perigynia. Analysis of morphological data of 94 individuals from eleven populations using principal component analysis (PCA) revealed five clusters, which we consequently considered to correspond to five species. The achenes of Carex genkaiensis were strikingly different from all the other species regarding achene apex contracted into a 0.2–0.5 mm long neck-like appendage (vs. into a discoid-annulate style-base), as well as its perigynium indumentum (pubescent vs. sparsely pubescent). Carex anhuiensis, C. xuanchengensis and C. truncatirostris f. erostris are all synonymized to C. truncatirostris. The previously recognized Carex kamagariensis from Japan is synonymized to C. chungii. Carex chungii var. rigida is recognized as specific rank and the new name C. nanpingensis is proposed. Our study is the first effort to address the taxonomy of this complicate group as a whole in its entire range.


Mammalia ◽  
2020 ◽  
Vol 0 (0) ◽  
Author(s):  
Julio J. Chacón-Pacheco ◽  
Luis José Avendaño Maldonado ◽  
Carlos Agamez-López ◽  
Ingrith Yuliany Mejía-Fontecha ◽  
Daniela Velásquez-Guarín ◽  
...  

AbstractThe genus Molossops includes two species that are restricted to South America: Molossops neglectus and Molossops temminckii. The smaller dog-faced dwarf Molossops temminckii is distributed from Colombia to Argentina and has a wide morphological variation and vocal plasticity. In Colombia, this species remains poorly known. To fill distributional gaps, we present novel records from Arauca, Atlántico, Bolívar, Córdoba, and Huila departments. We also present an analysis of the morphometric variation in South America using Principal Component Analyses. These show an external and cranial difference of specimens of Colombia in respect of other and South America populations. In Colombian landscapes dominated by the floodplain savanna of the Orinoco region, Molossops temminckii is smaller than in the other regions of the country, and the previously suggested existence of cryptic diversity within the taxon should be evaluated. Therefore, we suggest further integrative analyses to investigate a possible subspecific status of some Colombian populations.


2011 ◽  
Vol 25 (1) ◽  
pp. 43-52 ◽  
Author(s):  
Boele De Raad ◽  
Jan Pieter Van Oudenhoven

Following the psycholexical approach, a list of 153 virtue descriptors was selected from a previously constructed list of trait–terms, under the assumption that virtues form a subset of traits. The virtue list was administered to 400 participants (self– and other–raters), who had to indicate the extent to which each term applied to them or to the others. Principal Component Analyses were performed yielding six factors of virtues. In addition, Big Five factors and markers of an external set of virtues were constructed. Correlation and regression analyses were performed to describe the relations between virtues, the Dutch Big Five system and other virtue systems. Compared to the other virtue systems, the present study revealed some additional domains. The overlap found with personality measures corresponds to earlier findings supporting the assumption that virtues are important traits. Copyright © 2010 John Wiley & Sons, Ltd.


Our Nature ◽  
2014 ◽  
Vol 11 (2) ◽  
pp. 126-137 ◽  
Author(s):  
S. Kohestan-Eskandari ◽  
H. AnvariFar ◽  
H. Mousavi-Sabet

A 13-landmark morphometric truss network system was used for 135 specimens to investigate the hypothesis differentiation of golden grey mullet along the southeastern Caspian Sea. Univariate analysis of variance showed significant differences among the means of the three groups for 35 standardized morphometric measurements out of 78 characters studied. In linear discriminant function analysis (DFA), the overall assignment of individuals into their original groups was 66.7%. The proportions of individuals correctly classified into their original groups were 62.5%, 59.1%, 76.5% in Neka, Behshahr and Galogah populations, respectively. The Principal Component Analysis (PCA) showed that the specimens grouped into 2 areas with high degree of overlap. Clustering analysis based on Euclidean square distances among the studied groups of centroids using an UPGMA resulted segregation of the three populations into two distinct clusters. These results could be of interest for management and conservation programs of this species in the Caspian Sea.DOI: http://dx.doi.org/10.3126/on.v11i2.9595 Our Nature 2013, 11(2): 126-157


1981 ◽  
Vol 59 (12) ◽  
pp. 2253-2274 ◽  
Author(s):  
Henri Goulet ◽  
Bernard R. Baum

Elaphrus americanus Dejean (sensu Lindroth, 1961) is a complex of two nearctic species: E. americanus and E. finitimus Casey. This study is primarily devoted to E. americanus, which includes two subspecies: a boreal subspecies and a newly described western subspecies, E. americanus sylvanus Goulet n. subsp., for which the type locality is Oregon, Coos Co., 16 miles north of Powers.The species and subspecies mentioned above were recognized by means of numerical taxonomic analysis. Most intuitively acceptable were the results of phenetic clustering of Mahalanobis distances followed by a series of discriminant analyses. Various analyses were carried out based directly on computed euclidean distances, e.g. principal coordinate analyses, nonmetric multidimensional scaling, and still others by computing first the variance–covariance matrix, e.g., principal component analyses. Other geographically distinct populations were recognized by univariate analysis of nominal characters.Phylogenetic relationships between various populations of E. americanus are partly reconstructed. A reconstruction of past distribution of these populations is presented and their evolutionary significance discussed.


Author(s):  
Jihhyeon Yi ◽  
Sungryul Park ◽  
Juah Im ◽  
Seonyeong Jeon ◽  
Gyouhyung Kyung

The purpose of this study was to examine the effects of display curvature and hand length on smartphone usability, which was assessed in terms of grip comfort, immersive feeling, typing performance, and overall satisfaction. A total of 20 younger individuals with the mean (SD) age of 20.8 (2.4) yrs were divided into three hand-size groups (small: 8, medium: 6, large: 6). Two smartphones of the same size were used – one with a flat display and the other with a side-edge curved display. Three tasks (watching video, calling, and texting) were used to evaluate smartphone usability. The smartphones were used in a landscape mode for the first task, and in a portrait mode for the other two. The flat display smartphone provided higher grip comfort during calling (p = 0.008) and texting (p = 0.006) and higher overall satisfaction (p = 0.0002) than the curved display smartphone. The principal component regression (adjusted R2 = 0.49) of overall satisfaction on three principal components comprised of the remaining measures showed that the first principal component on grip comfort was more important than the other two on watching experience and texting performance. It is thus necessary to carefully consider the effect of display curvature on grip comfort when applying curved displays to hand-held devices such as smartphones.


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