scholarly journals Simultaneous Recognition of Species, Quality Grades, and Multivariate Calibration of Antioxidant Activities for 12 Famous Green Teas Using Mid- and Near-Infrared Spectroscopy Coupled with Chemometrics

2019 ◽  
Vol 2019 ◽  
pp. 1-14 ◽  
Author(s):  
Haiyan Fu ◽  
Ou Hu ◽  
Lu Xu ◽  
Yao Fan ◽  
Qiong Shi ◽  
...  
Keyword(s):  
Infrared Spectroscopy ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Multivariate Calibration ◽  
Antioxidant Activities ◽  
Confidence Region ◽  
Weighted Least Squares ◽  
Recognition Rate ◽  
Partial Least Square ◽  
Support Vector

In this paper, mid- and near-infrared spectroscopy fingerprints were combined to simultaneously discriminate 12 famous green teas and quantitatively characterize their antioxidant activities using chemometrics. A supervised pattern recognition method based on partial least square discriminant analysis (PLSDA) was adopted to classify the 12 famous green teas with different species and quality grades, and then optimized sample-weighted least-squares support vector machine (OSWLS-SVM) based on particle swarm optimization was employed to investigate the quantitative relationship between their antioxidant activities and the spectral fingerprints. As a result, 12 famous green teas can be discriminated with a recognition rate of 100% by MIR or NIR data. However, compared with individual instrumental data, data fusion was more adequate for modeling the antioxidant activities of samples with RMSEP of 0.0065. Finally, the performance of the proposed method was evaluated and validated by some statistical parameters and the elliptical joint confidence region (EJCR) test. The results indicate that fusion of mid- and near-infrared spectroscopy suggests a new avenue to discriminate the species and grades of green teas. Moreover, the proposed method also implies other promising applications with more accurate multivariate calibration of antioxidant activities.

Visible-near infrared spectroscopy for detection of blood in sheep faeces

2020 ◽  
Vol 28 (5-6) ◽  
pp. 255-266 ◽  
Author(s):  
Elise A Kho ◽  
Jill N Fernandes ◽  
Andrew C Kotze ◽  
Glen P Fox ◽  
Maggy Lord ◽  
...  
Keyword(s):  
Support Vector Machine ◽  
Infrared Spectroscopy ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Mean Squared Error ◽  
Partial Least Square ◽  
Least Square ◽  
Support Vector ◽  
Root Mean Squared Error ◽  
Squared Error

Heavy infestations of the blood-sucking gastrointestinal nematodes, Haemonchus contortus can cause severe anaemia in sheep and leakage of blood into the faeces, leading to morbidity and mortality. Early and accurate diagnosis of infections is critical for timely treatment of sheep, minimizing production and sheep welfare impacts. In pursuit of a quick and easy measure of H. contortus infections, we investigated the use of portable visible near infrared spectrometers for detecting the presence of haemoglobin in sheep faeces as an indicator of H. contortus infection. Calibration models built within the 400–600 nm region by partial least square regression resulted in acceptable prediction accuracies (r 2 p > 0.70 and root mean squared error of prediction <2.64 µg Hb mg−1 faeces) for haemoglobin quantification using two spectrometers. The prediction results from support vector machine regression further improved the prediction of haemoglobin in moist sheep faeces (r 2 p > 0.87 and root mean squared error of prediction <2.00 µg haemoglobin mg−1 faeces). Based on a threshold for anthelmintic treatment of 3 µg Hb mg−1 faeces, both the partial least square and support vector machine models showed high sensitivity (89%) and high specificity (>77%). The specificity of the prediction model for detecting haemoglobin in sheep faeces may be improved by adding more variations in faecal composition into the calibration model. Our success in detecting haemoglobin in sheep faeces, following minimal sample preparation, suggests that with further development, vis–near infrared spectroscopy can provide a sensitive and convenient method for on-farm diagnosis of H. contortus infections.

Study of Pesticide Contaminated Navel Orange Recognition Using near Infrared Spectroscopy

2011 ◽  
Vol 186 ◽  
pp. 121-125 ◽  
Author(s):  
Long Xue ◽  
Jing Li ◽  
Mu Hua Liu ◽  
Xiao Wang ◽  
Chun Sheng Luo
Keyword(s):  
Genetic Algorithm ◽  
Infrared Spectroscopy ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Recognition Accuracy ◽  
Recognition Rate ◽  
Support Vector ◽  
Navel Orange ◽  
Set Up ◽  
Spectral Ranges

Based on Support Vector Machine (SVM) and genetic algorithm (GA), this paper intends to search for the characteristic spectral ranges and wavelengths of near infrared spectroscopy of navel oranges contaminated by different pesticides, and set up recognition models. The pesticides in the experiment were Lannate®L insecticide, fenvalerate and omethoate, and three different concentrations were given to each pesticide. Preparing ten groups of navel oranges, each group was sprayed with a different pesticide and the 10th group without pesticide spraying was used for comparison. Searching the whole spectral range through GA, 5 best spectral ranges (165 wavelengths) were obtained and the recognition rate reached 98.86%. Then based on the chosen spectral ranges, 85 feature wavelengths were extracted with continual GA-SVM optimization, and the recognition rate was 99.14%. Experiment results showed that the application of SVM combining with GA can not only improve recognition accuracy, but also simplify the model effectively

scholarly journals Classifying Motion Intention of Step Length and Synchronous Walking Speed by Functional Near-Infrared Spectroscopy

2021 ◽  
Vol 2021 ◽  
pp. 1-11
Author(s):  
Yufei Zhu ◽  
Chunguang Li ◽  
Hedian Jin ◽  
Lining Sun
Keyword(s):  
Infrared Spectroscopy ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Walking Speed ◽  
Recognition Rate ◽  
Step Length ◽  
Support Vector ◽  
Functional Near Infrared Spectroscopy ◽  
Cord Injury ◽  
Motion Intention

In some patients who have suffered an amputation or spinal cord injury, walking ability may be degraded or deteriorated. Helping these patients walk independently on their own initiative is of great significance. This paper proposes a method to identify subjects’ motion intention under different levels of step length and synchronous walking speed by using functional near-infrared spectroscopy technology. Thirty-one healthy subjects were recruited to walk under six given sets of gait parameters (small step with low/midspeed, midstep with low/mid/high speed, and large step with midspeed). The channels were subdivided into more regions. More frequency bands (6 subbands on average in the range of 0-0.18 Hz) were decomposed by applying the wavelet packet method. Further, a genetic algorithm and a library for support vector machine algorithm were applied for selecting typical feature vectors, which were represented by important regions with partial important channels mentioned above. The walking speed recognition rate was 71.21% in different step length states, and the step length recognition rate was 71.21% in different walking speed states. This study explores the method of identifying motion intention in two-dimensional multivariate states. It lays the foundation for controlling walking-assistance equipment adaptively based on cerebral hemoglobin information.

scholarly journals Classification of Prefrontal Cortex Activity Based on Functional Near-Infrared Spectroscopy Data upon Olfactory Stimulation

2021 ◽  
Vol 11 (6) ◽  
pp. 701
Author(s):  
Cheng-Hsuan Chen ◽  
Kuo-Kai Shyu ◽  
Cheng-Kai Lu ◽  
Chi-Wen Jao ◽  
Po-Lei Lee
Keyword(s):  
Prefrontal Cortex ◽  
Infrared Spectroscopy ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Kernel Functions ◽  
Olfactory Stimulation ◽  
Support Vector ◽  
Hemodynamic Response Function ◽  
Functional Near Infrared Spectroscopy ◽  
Data Set

The sense of smell is one of the most important organs in humans, and olfactory imaging can detect signals in the anterior orbital frontal lobe. This study assessed olfactory stimuli using support vector machines (SVMs) with signals from functional near-infrared spectroscopy (fNIRS) data obtained from the prefrontal cortex. These data included odor stimuli and air state, which triggered the hemodynamic response function (HRF), determined from variations in oxyhemoglobin (oxyHb) and deoxyhemoglobin (deoxyHb) levels; photoplethysmography (PPG) of two wavelengths (raw optical red and near-infrared data); and the ratios of data from two optical datasets. We adopted three SVM kernel functions (i.e., linear, quadratic, and cubic) to analyze signals and compare their performance with the HRF and PPG signals. The results revealed that oxyHb yielded the most efficient single-signal data with a quadratic kernel function, and a combination of HRF and PPG signals yielded the most efficient multi-signal data with the cubic function. Our results revealed superior SVM analysis of HRFs for classifying odor and air status using fNIRS data during olfaction in humans. Furthermore, the olfactory stimulation can be accurately classified by using quadratic and cubic kernel functions in SVM, even for an individual participant data set.

Prediction of neutral detergent fiber content in corn stover using near-infrared spectroscopy technique

2020 ◽  
Vol 0 (0) ◽  
Author(s):  
Xuyang Pan ◽  
Laijun Sun ◽  
Guobing Sun ◽  
Panxiang Rong ◽  
Yuncai Lu ◽  
...  
Keyword(s):  
Infrared Spectroscopy ◽  
Prediction Model ◽  
Spectral Data ◽  
Corn Stover ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Cross Validation ◽  
Fiber Content ◽  
Partial Least Square ◽  
Neutral Detergent Fiber

AbstractNeutral detergent fiber (NDF) content was the critical indicator of fiber in corn stover. This study aimed to develop a prediction model to precisely measure NDF content in corn stover using near-infrared spectroscopy (NIRS) technique. Here, spectral data ranging from 400 to 2500 nm were obtained by scanning 530 samples, and Monte Carlo Cross Validation and the pretreatment were used to preprocess the original spectra. Moreover, the interval partial least square (iPLS) was employed to extract feature wavebands to reduce data computation. The PLSR model was built using two spectral regions, and it was evaluated with the coefficient of determination (R2) and root mean square error of cross validation (RMSECV) obtaining 0.97 and 0.65%, respectively. The overall results proved that the developed prediction model coupled with spectral data analysis provides a set of theoretical foundations for NIRS techniques application on measuring fiber content in corn stover.

scholarly journals Comparison of Hyperspectral Imaging and Near-Infrared Spectroscopy to Determine Nitrogen and Carbon Concentrations in Wheat

2021 ◽  
Vol 13 (6) ◽  
pp. 1128
Author(s):  
Iman Tahmasbian ◽  
Natalie K Morgan ◽  
Shahla Hosseini Bai ◽  
Mark W Dunlop ◽  
Amy F Moss
Keyword(s):  
Infrared Spectroscopy ◽  
Hyperspectral Imaging ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Economic Benefits ◽  
Partial Least Square ◽  
Least Square ◽  
Statistical Population ◽  
Processing Plants ◽  
C And N

Hyperspectral imaging (HSI) is an emerging rapid and non-destructive technology that has promising application within feed mills and processing plants in poultry and other intensive animal industries. HSI may be advantageous over near infrared spectroscopy (NIRS) as it scans entire samples, which enables compositional gradients and sample heterogenicity to be visualised and analysed. This study was a preliminary investigation to compare the performance of HSI with that of NIRS for quality measurements of ground samples of Australian wheat and to identify the most important spectral regions for predicting carbon (C) and nitrogen (N) concentrations. In total, 69 samples were scanned using an NIRS (400–2500 nm), and two HSI cameras operated in 400–1000 nm (VNIR) and 1000–2500 nm (SWIR) spectral regions. Partial least square regression (PLSR) models were used to correlate C and N concentrations of 63 calibration samples with their spectral reflectance, with 6 additional samples used for testing the models. The accuracy of the HSI predictions (full spectra) were similar or slightly higher than those of NIRS (NIRS Rc2 for C = 0.90 and N = 0.96 vs. HSI Rc2 for C (VNIR) = 0.97 and N (SWIR) = 0.97). The most important spectral region for C prediction identified using HSI reflectance was 400–550 nm with R2 of 0.93 and RMSE of 0.17% in the calibration set and R2 of 0.86, RMSE of 0.21% and ratio of performance to deviation (RPD) of 2.03 in the test set. The most important spectral regions for predicting N concentrations in the feed samples included 1451–1600 nm, 1901–2050 nm and 2051–2200 nm, providing prediction with R2 ranging from 0.91 to 0.93, RMSE ranging from 0.06% to 0.07% in the calibration sets, R2 from 0.96 to 0.99, RMSE of 0.06% and RPD from 3.47 to 3.92 in the test sets. The prediction accuracy of HSI and NIRS were comparable possibly due to the larger statistical population (larger number of pixels) that HSI provided, despite the fact that HSI had smaller spectral range compared with that of NIRS. In addition, HSI enabled visualising the variability of C and N in the samples. Therefore, HSI is advantageous compared to NIRS as it is a multifunctional tool that poses many potential applications in data collection and quality assurance within feed mills and poultry processing plants. The ability to more accurately measure and visualise the properties of feed ingredients has potential economic benefits and therefore additional investigation and development of HSI in this application is warranted.

Linear transformations of multivariate calibration models in near infrared spectroscopy: A comparative study

2017 ◽  
Vol 25 (4) ◽  
pp. 223-230 ◽  
Author(s):  
Joseph Dubrovkin
Keyword(s):  
Infrared Spectroscopy ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Multivariate Calibration ◽  
Cetane Number ◽  
Total Protein Content ◽  
Prediction Errors ◽  
Calibration Data ◽  
Linear Transformations ◽  
Calibration Models

It was shown that linear transformations are suitable for use in multivariate calibration in near infrared spectroscopy as data compression tools. Partial Least Squares calibration models were built using spectral data transformed by expansion in the series of classical orthogonal polynomials, Fourier and wavelet harmonics. These models allowed effective prediction of the cetane number of diesel fuels, Brix and pol parameters of syrup in sugar production and fat and total protein content in milk. Depending on the compression ratio, prediction errors were no larger than 30% of corresponding errors obtained by the use of the non-transformed models. Although selection of the most suitable transformation depends on the calibration data and on the cross-validation method, in many cases Fourier transform gave satisfactory results.

scholarly journals Analysis of Different Classification Techniques for Two-Class Functional Near-Infrared Spectroscopy-Based Brain-Computer Interface

2016 ◽  
Vol 2016 ◽  
pp. 1-11 ◽  
Author(s):  
Noman Naseer ◽  
Nauman Khalid Qureshi ◽  
Farzan Majeed Noori ◽  
Keum-Shik Hong
Keyword(s):  
Infrared Spectroscopy ◽  
Discriminant Analysis ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Continuous Wave ◽  
Mental Arithmetic ◽  
Statistical Significance ◽  
Support Vector ◽  
Functional Near Infrared Spectroscopy ◽  
Linear Discriminant

We analyse and compare the classification accuracies of six different classifiers for a two-class mental task (mental arithmetic and rest) using functional near-infrared spectroscopy (fNIRS) signals. The signals of the mental arithmetic and rest tasks from the prefrontal cortex region of the brain for seven healthy subjects were acquired using a multichannel continuous-wave imaging system. After removal of the physiological noises, six features were extracted from the oxygenated hemoglobin (HbO) signals. Two- and three-dimensional combinations of those features were used for classification of mental tasks. In the classification, six different modalities, linear discriminant analysis (LDA), quadratic discriminant analysis (QDA),k-nearest neighbour (kNN), the Naïve Bayes approach, support vector machine (SVM), and artificial neural networks (ANN), were utilized. With these classifiers, the average classification accuracies among the seven subjects for the 2- and 3-dimensional combinations of features were 71.6, 90.0, 69.7, 89.8, 89.5, and 91.4% and 79.6, 95.2, 64.5, 94.8, 95.2, and 96.3%, respectively. ANN showed the maximum classification accuracies: 91.4 and 96.3%. In order to validate the results, a statistical significance test was performed, which confirmed that thepvalues were statistically significant relative to all of the other classifiers (p< 0.005) using HbO signals.

scholarly journals Discrimination and Content Analysis of Fritillaria Using Near Infrared Spectroscopy

2015 ◽  
Vol 2015 ◽  
pp. 1-8 ◽  
Author(s):  
Yu Meng ◽  
Shisheng Wang ◽  
Rui Cai ◽  
Bohai Jiang ◽  
Weijie Zhao
Keyword(s):  
Infrared Spectroscopy ◽  
Quantitative Analysis ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Partial Least Square ◽  
Least Square ◽  
Traditional Chinese Herbal Medicine ◽  
Total Alkaloids ◽  
Rapid Discrimination ◽  
Different Origins

Fritillaria is a traditional Chinese herbal medicine which can be used to moisten the lungs. The objective of this study is to develop simple, accurate, and solvent-free methods to discriminate and quantify Fritillaria herbs from seven different origins. Near infrared spectroscopy (NIRS) methods are established for the rapid discrimination of seven different Fritillaria samples and quantitative analysis of their total alkaloids. The scaling to first range method and the partial least square (PLS) method are used for the establishment of qualitative and quantitative analysis models. As a result of evaluation for the qualitative NIR model, the selectivity values between groups are always above 2, and the mistaken judgment rate of fifteen samples in prediction sets was zero. This means that the NIR model can be used to distinguish different species of Fritillaria herbs. The established quantitative NIR model can accurately predict the content of total alkaloids from Fritillaria samples.

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