scholarly journals Deep Learning-Based Detection and Diagnosis of Subarachnoid Hemorrhage

2021 ◽  
Vol 2021 ◽  
pp. 1-10
Author(s):  
Xiaohong Gou ◽  
Xuenong He
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Subarachnoid Hemorrhage ◽  
High Reliability ◽  
Uncertainty Estimation ◽  
Semisupervised Learning ◽  
Training Data ◽  
High Morbidity ◽  
Observational Uncertainty ◽  
Model Training

Subarachnoid hemorrhage (SAH) is one of the critical and severe neurological diseases with high morbidity and mortality. Head computed tomography (CT) is among the preferred methods for the diagnosis of SAH, which is confirmed by CT showing high-density shadow in the subarachnoid space. Analysis of these images through a deep learning-based subarachnoid hemorrhage will reduce the approximate rate of misdiagnosis in general and missed diagnosis by clinicians in particular. Deep learning-based detection of subarachnoid hemorrhage mainly includes two tasks, i.e., subarachnoid hemorrhage classification and subarachnoid hemorrhage region segmentation. However, it is difficult to effectively judge reliability of the model and classify bleeding which is based on limited predictive probability of convolutional neural network output. Moreover, deep learning-based bleeding area segmentation requires a large amount of training data to be marked in advance and the large number of network parameters makes the model training unable to reach the optimal. To resolve these problems associated with existing models, Bayesian deep learning and neural network-based hybrid model is presented in this paper to estimate uncertainty and efficiently classify subarachnoid hemorrhage. Uncertainty estimation of the proposed model helps in judging whether the model’s prediction is reliable or not. Additionally, it is used to guide clinicians to find the neglected subarachnoid hemorrhage area. In addition, a teacher-student mechanism deep learning model was designed to introduce observational uncertainty estimation for semisupervised learning of subarachnoid hemorrhage. Observation uncertainty estimation detects the uncertain bleeding areas in CT images and then selects areas with high reliability. Finally, it uses these unlabeled data for model training purposes as well.

scholarly journals UNCERTAINTY ESTIMATION FOR END-TO-END LEARNED DENSE STEREO MATCHING VIA PROBABILISTIC DEEP LEARNING

2020 ◽  
Vol V-2-2020 ◽  
pp. 161-169
Author(s):  
M. Mehltretter
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Stereo Matching ◽  
Probabilistic Neural Network ◽  
Uncertainty Estimation ◽  
Training Data ◽  
Stereo Image ◽  
Confidence Estimation ◽  
Extensive Evaluation ◽  
Dense Stereo Matching

Abstract. Motivated by the need to identify erroneous disparity assignments, various approaches for uncertainty and confidence estimation of dense stereo matching have been presented in recent years. As in many other fields, especially deep learning based methods have shown convincing results. However, most of these methods only model the uncertainty contained in the data, while ignoring the uncertainty of the employed dense stereo matching procedure. Additionally modelling the latter, however, is particularly beneficial if the domain of the training data varies from that of the data to be processed. For this purpose, in the present work the idea of probabilistic deep learning is applied to the task of dense stereo matching for the first time. Based on the well-known and commonly employed GC-Net architecture, a novel probabilistic neural network is presented, for the task of joint depth and uncertainty estimation from epipolar rectified stereo image pairs. Instead of learning the network parameters directly, the proposed probabilistic neural network learns a probability distribution from which parameters are sampled for every prediction. The variations between multiple such predictions on the same image pair allow to approximate the model uncertainty. The quality of the estimated depth and uncertainty information is assessed in an extensive evaluation on three different datasets.

Fully automated contrast and non-contrast cardiac view detection in echocardiography a multi-centre, multi-vendor study

2020 ◽  
Vol 41 (Supplement_2) ◽  
Author(s):  
S Gao ◽  
D Stojanovski ◽  
A Parker ◽  
P Marques ◽  
S Heitner ◽  
...  
Keyword(s):  
Neural Network ◽  
Training Data ◽  
Classification Model ◽  
Validation Dataset ◽  
Funding Source ◽  
Private Company ◽  
Validation Data ◽  
Independent Test ◽  
Model Training ◽  
Confusion Matrices

Abstract Background Correctly identifying views acquired in a 2D echocardiographic examination is paramount to post-processing and quantification steps often performed as part of most clinical workflows. In many exams, particularly in stress echocardiography, microbubble contrast is used which greatly affects the appearance of the cardiac views. Here we present a bespoke, fully automated convolutional neural network (CNN) which identifies apical 2, 3, and 4 chamber, and short axis (SAX) views acquired with and without contrast. The CNN was tested in a completely independent, external dataset with the data acquired in a different country than that used to train the neural network. Methods Training data comprised of 2D echocardiograms was taken from 1014 subjects from a prospective multisite, multi-vendor, UK trial with the number of frames in each view greater than 17,500. Prior to view classification model training, images were processed using standard techniques to ensure homogenous and normalised image inputs to the training pipeline. A bespoke CNN was built using the minimum number of convolutional layers required with batch normalisation, and including dropout for reducing overfitting. Before processing, the data was split into 90% for model training (211,958 frames), and 10% used as a validation dataset (23,946 frames). Image frames from different subjects were separated out entirely amongst the training and validation datasets. Further, a separate trial dataset of 240 studies acquired in the USA was used as an independent test dataset (39,401 frames). Results Figure 1 shows the confusion matrices for both validation data (left) and independent test data (right), with an overall accuracy of 96% and 95% for the validation and test datasets respectively. The accuracy for the non-contrast cardiac views of >99% exceeds that seen in other works. The combined datasets included images acquired across ultrasound manufacturers and models from 12 clinical sites. Conclusion We have developed a CNN capable of automatically accurately identifying all relevant cardiac views used in “real world” echo exams, including views acquired with contrast. Use of the CNN in a routine clinical workflow could improve efficiency of quantification steps performed after image acquisition. This was tested on an independent dataset acquired in a different country to that used to train the model and was found to perform similarly thus indicating the generalisability of the model. Figure 1. Confusion matrices Funding Acknowledgement Type of funding source: Private company. Main funding source(s): Ultromics Ltd.

scholarly journals Robust Approach to Supervised Deep Neural Network Training for Real-Time Object Classification in Cluttered Indoor Environment

2021 ◽  
Vol 11 (15) ◽  
pp. 7148
Author(s):  
Bedada Endale ◽  
Abera Tullu ◽  
Hayoung Shi ◽  
Beom-Soo Kang
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Real Time ◽  
Network Architecture ◽  
Input Data ◽  
Deep Neural Network ◽  
Data Augmentation ◽  
Object Classification ◽  
Training Data ◽  
Gradient Descent Algorithm

Unmanned aerial vehicles (UAVs) are being widely utilized for various missions: in both civilian and military sectors. Many of these missions demand UAVs to acquire artificial intelligence about the environments they are navigating in. This perception can be realized by training a computing machine to classify objects in the environment. One of the well known machine training approaches is supervised deep learning, which enables a machine to classify objects. However, supervised deep learning comes with huge sacrifice in terms of time and computational resources. Collecting big input data, pre-training processes, such as labeling training data, and the need for a high performance computer for training are some of the challenges that supervised deep learning poses. To address these setbacks, this study proposes mission specific input data augmentation techniques and the design of light-weight deep neural network architecture that is capable of real-time object classification. Semi-direct visual odometry (SVO) data of augmented images are used to train the network for object classification. Ten classes of 10,000 different images in each class were used as input data where 80% were for training the network and the remaining 20% were used for network validation. For the optimization of the designed deep neural network, a sequential gradient descent algorithm was implemented. This algorithm has the advantage of handling redundancy in the data more efficiently than other algorithms.

scholarly journals Real-Time Automated Classification of Sky Conditions Using Deep Learning and Edge Computing

2021 ◽  
Vol 13 (19) ◽  
pp. 3859
Author(s):  
Joby M. Prince Czarnecki ◽  
Sathishkumar Samiappan ◽  
Meilun Zhou ◽  
Cary Daniel McCraine ◽  
Louis L. Wasson
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Image Quality ◽  
Convolutional Neural Network ◽  
Precision Agriculture ◽  
Edge Computing ◽  
Training Data ◽  
Learning Approaches ◽  
Sky Conditions

The radiometric quality of remotely sensed imagery is crucial for precision agriculture applications because estimations of plant health rely on the underlying quality. Sky conditions, and specifically shadowing from clouds, are critical determinants in the quality of images that can be obtained from low-altitude sensing platforms. In this work, we first compare common deep learning approaches to classify sky conditions with regard to cloud shadows in agricultural fields using a visible spectrum camera. We then develop an artificial-intelligence-based edge computing system to fully automate the classification process. Training data consisting of 100 oblique angle images of the sky were provided to a convolutional neural network and two deep residual neural networks (ResNet18 and ResNet34) to facilitate learning two classes, namely (1) good image quality expected, and (2) degraded image quality expected. The expectation of quality stemmed from the sky condition (i.e., density, coverage, and thickness of clouds) present at the time of the image capture. These networks were tested using a set of 13,000 images. Our results demonstrated that ResNet18 and ResNet34 classifiers produced better classification accuracy when compared to a convolutional neural network classifier. The best overall accuracy was obtained by ResNet34, which was 92% accurate, with a Kappa statistic of 0.77. These results demonstrate a low-cost solution to quality control for future autonomous farming systems that will operate without human intervention and supervision.

scholarly journals On the objectivity, reliability, and validity of deep learning enabled bioimage analyses

eLife ◽  
2020 ◽  
Vol 9 ◽  
Author(s):  
Dennis Segebarth ◽  
Matthias Griebel ◽  
Nikolai Stein ◽  
Cora R von Collenberg ◽  
Corinna Martin ◽  
...  
Keyword(s):  
Deep Learning ◽  
Signal To Noise Ratio ◽  
Biological Effects ◽  
Reliability And Validity ◽  
Ground Truth ◽  
Training Data ◽  
Model Organisms ◽  
Data Annotation ◽  
Bioimage Analysis ◽  
Model Training

Bioimage analysis of fluorescent labels is widely used in the life sciences. Recent advances in deep learning (DL) allow automating time-consuming manual image analysis processes based on annotated training data. However, manual annotation of fluorescent features with a low signal-to-noise ratio is somewhat subjective. Training DL models on subjective annotations may be instable or yield biased models. In turn, these models may be unable to reliably detect biological effects. An analysis pipeline integrating data annotation, ground truth estimation, and model training can mitigate this risk. To evaluate this integrated process, we compared different DL-based analysis approaches. With data from two model organisms (mice, zebrafish) and five laboratories, we show that ground truth estimation from multiple human annotators helps to establish objectivity in fluorescent feature annotations. Furthermore, ensembles of multiple models trained on the estimated ground truth establish reliability and validity. Our research provides guidelines for reproducible DL-based bioimage analyses.

Deep Learning Based Adaptive Recurrent Neural Network for Detection of Myocardial Infarction

2021 ◽  
Vol 11 (12) ◽  
pp. 3044-3053
Author(s):  
Rakesh Kumar Mahendran ◽  
V. Prabhu ◽  
V. Parthasarathy ◽  
A. Mary Judith
Keyword(s):  
Neural Network ◽  
Myocardial Infarction ◽  
Deep Learning ◽  
Recurrent Neural Network ◽  
Classification Accuracy ◽  
Learning Algorithm ◽  
Training Data ◽  
Discrete Wavelet ◽  
Ecg Signal ◽  
Detection Techniques

Myocardial infarction (MI) may precipitate severe health damage and lead to irreversible death of the heart muscle, the result of prolonged lack of oxygen if it is not treated in a timely manner. Lack of accurate and early detection techniques for this heart disease has reduced the efficiency of MI diagnosis. In this paper, the design, and implementation of an efficient deep learning algorithm called Adaptive Recurrent neural network (ARNN) is proposed for the MI detection. The main objective of the proposed work is the accurate identification of MI disease using ECG signals. ECG signal denoising has been performed using the Multi-Notch filter, which removes the specified noise frequency range. Discrete wavelet transform (DWT) is utilized for performing the feature extraction that decomposes the ECG signal into varied scales with waveletfiltering bank. After the extraction of specific QRS features, classification of the defected and normal ECG arrhythmic beat has been performed using the deep learning-based ARNN classifier. The MIT-BIH database has been used for testing and training data. The performance of the proposed algorithm is evaluated based on classification accuracy. Results that are attained include the classification accuracy of about 99.21%, 99% of sensitivity and 99.4% of specificity with PPV and NPV of about 99.4 and 99.01 values indicate the enhanced performance of our proposed work compared with the conventional LSTM-CAE and LSTM-CNN techniques.

Oversampling Based on Data Augmentation in Convolutional Neural Network for Silicon Wafer Defect Classification

2020 ◽  
Author(s):  
Uzma Batool ◽  
Mohd Ibrahim Shapiai ◽  
Nordinah Ismail ◽  
Hilman Fauzi ◽  
Syahrizal Salleh
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
Silicon Wafer ◽  
Data Augmentation ◽  
Imbalanced Data ◽  
Training Data ◽  
Defect Classification ◽  
Learning Method ◽  
Test Set

Silicon wafer defect data collected from fabrication facilities is intrinsically imbalanced because of the variable frequencies of defect types. Frequently occurring types will have more influence on the classification predictions if a model gets trained on such skewed data. A fair classifier for such imbalanced data requires a mechanism to deal with type imbalance in order to avoid biased results. This study has proposed a convolutional neural network for wafer map defect classification, employing oversampling as an imbalance addressing technique. To have an equal participation of all classes in the classifier’s training, data augmentation has been employed, generating more samples in minor classes. The proposed deep learning method has been evaluated on a real wafer map defect dataset and its classification results on the test set returned a 97.91% accuracy. The results were compared with another deep learning based auto-encoder model demonstrating the proposed method, a potential approach for silicon wafer defect classification that needs to be investigated further for its robustness.

Convolutional Neural Network

2022 ◽  
pp. 1559-1575
Author(s):  
Mário Pereira Véstias
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Neural Networks ◽  
Artificial Neural Networks ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
Machine Learning Algorithms ◽  
Training Data ◽  
Machine Learning Model ◽  
Artificial Neural

Machine learning is the study of algorithms and models for computing systems to do tasks based on pattern identification and inference. When it is difficult or infeasible to develop an algorithm to do a particular task, machine learning algorithms can provide an output based on previous training data. A well-known machine learning model is deep learning. The most recent deep learning models are based on artificial neural networks (ANN). There exist several types of artificial neural networks including the feedforward neural network, the Kohonen self-organizing neural network, the recurrent neural network, the convolutional neural network, the modular neural network, among others. This article focuses on convolutional neural networks with a description of the model, the training and inference processes and its applicability. It will also give an overview of the most used CNN models and what to expect from the next generation of CNN models.

scholarly journals Empirical Evaluation of the Effect of Optimization and Regularization Techniques on the Generalization Performance of Deep Convolutional Neural Network

2020 ◽  
Vol 10 (21) ◽  
pp. 7817
Author(s):  
Ivana Marin ◽  
Ana Kuzmanic Skelin ◽  
Tamara Grujic
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
Empirical Evaluation ◽  
Training Data ◽  
Generalization Performance ◽  
Deep Model ◽  
Unseen Data ◽  
Regularization Techniques ◽  
Learning Architectures

The main goal of any classification or regression task is to obtain a model that will generalize well on new, previously unseen data. Due to the recent rise of deep learning and many state-of-the-art results obtained with deep models, deep learning architectures have become one of the most used model architectures nowadays. To generalize well, a deep model needs to learn the training data well without overfitting. The latter implies a correlation of deep model optimization and regularization with generalization performance. In this work, we explore the effect of the used optimization algorithm and regularization techniques on the final generalization performance of the model with convolutional neural network (CNN) architecture widely used in the field of computer vision. We give a detailed overview of optimization and regularization techniques with a comparative analysis of their performance with three CNNs on the CIFAR-10 and Fashion-MNIST image datasets.

scholarly journals Analysis of COVID-19 Infections on a CT Image Using DeepSense Model

2020 ◽  
Vol 8 ◽  
Author(s):  
Adil Khadidos ◽  
Alaa O. Khadidos ◽  
Srihari Kannan ◽  
Yuvaraj Natarajan ◽  
Sachi Nandan Mohanty ◽  
...  
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Input Data ◽  
Training Data ◽  
Learning Framework ◽  
Learning Classifiers ◽  
Tomography Image ◽  
Mining Model ◽  
Deep Learning Model

In this paper, a data mining model on a hybrid deep learning framework is designed to diagnose the medical conditions of patients infected with the coronavirus disease 2019 (COVID-19) virus. The hybrid deep learning model is designed as a combination of convolutional neural network (CNN) and recurrent neural network (RNN) and named as DeepSense method. It is designed as a series of layers to extract and classify the related features of COVID-19 infections from the lungs. The computerized tomography image is used as an input data, and hence, the classifier is designed to ease the process of classification on learning the multidimensional input data using the Expert Hidden layers. The validation of the model is conducted against the medical image datasets to predict the infections using deep learning classifiers. The results show that the DeepSense classifier offers accuracy in an improved manner than the conventional deep and machine learning classifiers. The proposed method is validated against three different datasets, where the training data are compared with 70%, 80%, and 90% training data. It specifically provides the quality of the diagnostic method adopted for the prediction of COVID-19 infections in a patient.

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