A new Lamellibrachia species and confirmed range extension for Lamellibrachia barhami (Siboglinidae, Annelida) from Costa Rica methane seeps

Zootaxa ◽  
2018 ◽  
Vol 4504 (1) ◽  
pp. 1 ◽  
Author(s):  
MARINA F. MCCOWIN ◽  
GREG W. ROUSE
Keyword(s):  
Costa Rica ◽  
Phylogenetic Analyses ◽  
Geographic Range ◽  
Eastern Pacific ◽  
Congeneric Species ◽  
Methane Seep ◽  
Geographic Proximity ◽  
Vicariant Event ◽  
The Pacific ◽  
Costa Rica Margin

Lamellibrachia Webb, 1969 has eight currently recognized species reported from chemosynthetic environments in the Pacific, Atlantic, and Mediterranean. Of these, Lamellibrachia barhami Webb, 1969 has been reported in the eastern Pacific from Canada to Costa Rica. In this study, phylogenetic analyses of Lamellibrachia tubeworms sampled from the Costa Rica margin confirm the large geographic range of L. barhami and reveal a new Lamellibrachia species from a single methane seep between 999 and 1,040 meters. Lamellibrachia donwalshi sp. nov. differs genetically and morphologically from all congeneric species. Despite its geographic proximity to the eastern Pacific L. barhami, L. donwalshi sp. nov. formed a clade with Atlantic and Mediterranean Lamellibrachia species. This suggests a vicariant event may have occurred after an Atlantic radiation of Lamellibrachia. 

scholarly journals Helarchaeota and co-occurring sulfate-reducing bacteria in subseafloor sediments from the Costa Rica Margin

2021 ◽  
Vol 1 (1) ◽  
Author(s):  
Rui Zhao ◽  
Jennifer F. Biddle
Keyword(s):  
Costa Rica ◽  
Metabolic Pathways ◽  
Phylogenetic Analyses ◽  
Sulfate Reducing Bacteria ◽  
Sulfate Reducing ◽  
Hydrocarbon Emission ◽  
Costa Rica Margin ◽  
Reducing Bacteria ◽  
Electron Transfers ◽  
Deep Sediments

AbstractDeep sediments host many archaeal lineages, including the Asgard superphylum which contains lineages predicted to require syntrophic partnerships. Our knowledge about sedimentary archaeal diversity and their metabolic pathways and syntrophic partners is still very limited. We present here new genomes of Helarchaeota and the co-occurring sulfate-reducing bacteria (SRB) recovered from organic-rich sediments off Costa Rica Margin. Phylogenetic analyses revealed three new metagenome-assembled genomes (MAGs) affiliating with Helarchaeota, each of which has three variants of the methyl-CoM reductase-like (MCR-like) complex that may enable them to oxidize short-chain alkanes anaerobically. These Helarchaeota have no multi-heme cytochromes but have Group 3b and Group 3c [NiFe] hydrogenases, and formate dehydrogenase, and therefore have the capacity to transfer the reducing equivalents (in the forms of hydrogen and formate) generated from alkane oxidation to external partners. We also recovered five MAGs of SRB affiliated with the class of Desulfobacteria, two of which showed relative abundances (represented by genome coverages) positively correlated with those of the three Helarchaeota. Genome analysis suggested that these SRB bacteria have the capacity of H2 and formate utilization and could facilitate electron transfers from other organisms by means of these reduced substances. Their co-occurrence and metabolic features suggest that Helarchaeota may metabolize synergistically with some SRB, and together exert an important influence on the carbon cycle by mitigating the hydrocarbon emission from sediments to the overlying ocean.

Redescription of Pomatostegus stellatus (Abildgaard, 1789) and P. kroyeri Mörch, 1863 (Polychaeta: Serpulidae) from the Tropical American coasts

Zootaxa ◽  
2021 ◽  
Vol 4970 (3) ◽  
pp. 495-514
Author(s):  
J. PABLO SÁNCHEZ-OVANDO ◽  
J. ROLANDO BASTIDA-ZAVALA
Keyword(s):  
Costa Rica ◽  
Caribbean Sea ◽  
Morphological Characters ◽  
Identification Key ◽  
Eastern Pacific ◽  
Tropical Eastern Pacific ◽  
Tropical Waters ◽  
The Pacific ◽  
Plate Shape ◽  
The Caribbean

Pomatostegus Schmarda, 1861 is a serpulid genus with three recognized species, mostly from tropical waters. Pomatostegus stellatus (Abildgaard, 1789), was described from the Caribbean Sea, and has been widely recorded in the Pacific and Indian oceans; P. kroyeri Mörch, 1863 was described from Puntarenas, Costa Rica; however, most records from the Tropical Eastern Pacific were referred to P. stellatus. In this work, the two species are redescribed using morphological characters. The main differences are in the shape of the Spirobranchus-type collar chaetae, opercular plate shape and the number of “free” circlets of spines without accompanying of opercular plates. Comments about characters of P. actinoceras Mörch, 1863, described from Philippines, and an identification key for the three species, are included. 

Distribution and phylogeny of glacier ice worms (Mesenchytraeus solifugus and Mesenchytraeus solifugus rainierensis)

2005 ◽  
Vol 83 (9) ◽  
pp. 1206-1213 ◽  
Author(s):  
Paula L Hartzell ◽  
Jefferson V Nghiem ◽  
Kristina J Richio ◽  
Daniel H Shain
Keyword(s):  
Gene Flow ◽  
Phylogenetic Analyses ◽  
Geographic Range ◽  
Washington State ◽  
Mitochondrial Cytochrome ◽  
Passive Dispersal ◽  
South Central ◽  
The Pacific ◽  
Northwestern Region ◽  
Glacier Ice

Glacier ice worms, Mesenchytraeus solifugus (Emery, 1898) and Mesenchytraeus solifugus rainierensis Welch, 1916 (Enchytraeidae), are the only known oligochaetes adapted to life in ice. We have collected ice worm specimens from over 100 populations throughout the Pacific northwestern region of North America. Their current range extends ~2500 km along the Pacific coastline between south-central Alaska and central Oregon, with most populations occurring on relatively low-elevation, temperate glaciers. Phylogenetic analyses utilizing partial nuclear 28S rDNA and mitochondrial cytochrome c oxidase subunit I (COI) loci revealed the presence of two geographically distinct clades (northern and southern). The northern clade comprises all Alaskan populations, while the southern clade contains British Columbia, Washington State, and Oregon State populations. No evidence of gene flow was detected between these two lineages or between noncontiguous glaciers throughout their geographic range. Our results suggest that the mechanism of ice worm dispersal is primarily active, though at least one episode of passive dispersal is noted at the southern extent of their range.

Phylogeny, biogeography and systematics of Pacific vent, methane seep, and whale-fall Parougia (Dorvilleidae : Annelida), with eight new species

2020 ◽  
Vol 34 (2) ◽  
pp. 200
Author(s):  
Nicole K. Yen ◽  
Greg W. Rouse
Keyword(s):  
New Species ◽  
Dna Sequences ◽  
Deep Sea ◽  
Hydrothermal Vents ◽  
Phylogenetic Analyses ◽  
Methane Seep ◽  
Histone 3 ◽  
The Pacific ◽  
Different Types ◽  
The Pacific Ocean

Dorvilleidae is a diverse group of annelids found in many marine environments and also commonly associated with chemosynthetic habitats. One dorvilleid genus, Parougia, currently has 11 described species, of which two are found at vents or seeps: Parougia wolfi and Parougia oregonensis. Eight new Parougia species are recognised and described in this study from collections in the Pacific Ocean, all from whale-falls, hydrothermal vents, or methane seeps at ~600-m depth or greater. The specimens were studied using morphology and phylogenetic analyses of DNA sequences from mitochondrial (cytochrome c oxidase subunit I, 16S rRNA, and cytochrome b) and nuclear (18S rRNA and histone 3) genes. Six sympatric Parougia spp. were found at Hydrate Ridge, Oregon, while three of the Parougia species occurred at different types of chemosynthetic habitats. Two new species were found over wide geographical and bathymetric ranges. Another dorvilleid genus, Ophryotrocha, has previously been highlighted as diversifying in the deep-sea environment. Our results document the hitherto unknown diversity of another dorvilleid genus, Parougia, at various chemosynthetic environments. http://zoobank.org/urn:lsid:zoobank.org:pub:EC7EBBEA-2FB5-43D6-BE53-1A468B541A5C

A revision of the genus Leptogorgia Milne Edwards & Haime, 1857 (Coelenterata: Octocorallia: Gorgoniidae) in the eastern Pacific

Zootaxa ◽  
2007 ◽  
Vol 1419 (1) ◽  
pp. 1-90 ◽  
Author(s):  
ODALISCA BREEDY ◽  
HECTOR M. GUZMAN
Keyword(s):  
Costa Rica ◽  
El Salvador ◽  
Pacific Coast ◽  
Taxonomic Status ◽  
Eastern Pacific ◽  
Geographical Range ◽  
Type Material ◽  
The Pacific ◽  
Reference Specimens ◽  
Original Type

The species of the widespread gorgoniid genus Leptogorgia, which occur along the eastern Pacific, are taxonomically revised based on original type material of all species described until now and reference specimens from recent surveys and expeditions along the Pacific coast of Panama, and Costa Rica. As a result, 21 species are recognized as valid and one as dubious. Lectotypes are assigned for eight species in order to establish their taxonomic status. All the species are described and illustrated. The fauna herein reported does not represent overall diversity or geographical range of each species but adds new reports. The present count is 16 species for Panama, 11 for Costa Rica, 7 for Mexico, 6 for El Salvador, 4 for Peru, 4 for Ecuador, 3 for Colombia, 2 for California, 2 for Nicaragua, and 2 for Chile.

scholarly journals Helminths of hawksbill turtle (Eretmochelys imbricata) from the Pacific coast of Costa Rica

2015 ◽  
Vol 52 (1) ◽  
pp. 67-70 ◽  
Author(s):  
M. Santoro ◽  
J. A. Morales ◽  
F. Bolaáos ◽  
G. Chaves ◽  
M. De Stefano
Keyword(s):  
Costa Rica ◽  
Pacific Coast ◽  
Eastern Pacific ◽  
Pathological Changes ◽  
Eretmochelys Imbricata ◽  
Parasitological Examination ◽  
The Pacific ◽  
Nodular Lesions ◽  
First Time ◽  
Necrotic Debris

Summary Parasitological examination of a stranded hawksbill turtle (Eretmochelys imbricata) from Pacific coast of Costa Rica revealed the presence of a rich digenean fauna including Carettacola stunkardi (Spirorchiidae), Enodiotrema reductum (Plagiorchiidae), Cricocephalus albus, Adenogaster serialis, Epi-bathra crassa, Pleurogonius lobatus, P. trigonocephalus, P. linearis, and Pyelosomum posterorchis (Pronocephalidae). All helminths except C. albus and P. lobatus represent new geographical records for Costa Rica. Carettacola stunkardi is reported for first time in an Eastern Pacific hawksbill turtle and its pathological changes are here described. Histologically, nodular lesions on the serosal surface of intestine revealed a mixed infiltrate of heterophils, lymphocytes, and histiocytes within necrotic debris. Granulomas with spirorchiid eggs were observed in the mucosa, sub-mucosa and muscular layers of stomach and intestine, gallbladder and liver.

New olenelline trilobites from the Northwest Territories, Canada, and the phylogenetic placement of Judomia absita Fritz, 1973

Zootaxa ◽  
2011 ◽  
Vol 2918 (1) ◽  
pp. 15 ◽  
Author(s):  
I. WESLEY GAPP ◽  
BRUCE S. LIEBERMAN ◽  
MICHAEL C. POPE ◽  
KELLY A. DILLIARD
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Northwest Territories ◽  
Phylogenetic Analyses ◽  
Geographic Range ◽  
Early Cambrian ◽  
Phylogenetic Placement ◽  
The Subject ◽  
Three New Species ◽  
One New Species

The Early Cambrian olenelline trilobites are a diverse clade and have been the subject of several phylogenetic analyses. Here, three new species of Bradyfallotaspis Fritz, 1972 (B. coriae, B. nicolascagei, and B. sekwiensis) and one new species of Nevadia Walcott, 1910 (N. saupeae) are described from the Sekwi Formation of the Mackenzie Mountains, Northwest Territories, Canada. In addition, new specimens potentially referable to Nevadia ovalis McMenamin, 1987 were recovered that may expand that species’ geographic range, which was thought to be restricted to Sonora, Mexico. The results of a phylogenetic analysis incorporating several olenelline taxa, including Judomia absita Fritz, 1973 from the Sekwi Formation, are also presented herein. This species has been assigned to various olenelline genera, including Judomia Lermontova, 1951 and Paranevadella Palmer & Repina, 1993. Phylogenetic analysis suggests this species is closely related to Judomia tera Lazarenko, 1960 from Siberia. This phylogenetic relationship provides further support for the hypothesis that a close biogeographic relationship existed between Laurentia and Siberia during the Cambrian.

Reef coral reproduction in the eastern Pacific: Costa Rica, Panamá, and Galápagos Islands (Ecuador). II. Poritidae

1994 ◽  
Vol 118 (2) ◽  
pp. 191-208 ◽  
Author(s):  
P. W. Glynn ◽  
S. B. Colley ◽  
C. M. Eakin ◽  
D. B. Smith ◽  
J. Cortés ◽  
...  
Keyword(s):  
Costa Rica ◽  
Reef Coral ◽  
Galapagos Islands ◽  
Eastern Pacific ◽  
Galápagos Islands ◽  
Coral Reproduction
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