StoryFacets: A design study on storytelling with visualizations for collaborative data analysis

2021 ◽  
pp. 147387162110326
Author(s):  
Deokgun Park ◽  
Mohamed Suhail ◽  
Minsheng Zheng ◽  
Cody Dunne ◽  
Eric Ragan ◽  
...  
Keyword(s):  
Data Analysis ◽  
Design Study ◽  
Provenance Information ◽  
Sensemaking Process ◽  
Collaborative Sensemaking ◽  
Visualization Tools ◽  
The Many ◽  
High Level ◽  
Collaborative Data Analysis ◽  
Level Analysis

Tracking the sensemaking process is a well-established practice in many data analysis tools, and many visualization tools facilitate overview and recall during and after exploration. However, the resulting communication materials such as presentations or infographics often omit provenance information for the sake of simplicity. This unfortunately limits later viewers from engaging in further collaborative sensemaking or discussion about the analysis. We present a design study where we introduced visual provenance and analytics to urban transportation planning. Maintaining the provenance of all analyses was critical to support collaborative sensemaking among the many and diverse stakeholders. Our system, STORYFACETS, exposes several different views of the same analysis session, each view designed for a specific audience: (1) the trail view provides a data flow canvas that supports in-depth exploration + provenance (expert analysts); (2) the dashboard view organizes visualizations and other content into a space-filling layout to support high-level analysis (managers); and (3) the slideshow view supports linear storytelling via interactive step-by-step presentations (laypersons). Views are linked so that when one is changed, provenance is maintained. Visual provenance is available on demand to support iterative sensemaking for any team member.

scholarly journals EthIR: A Framework for High-Level Analysis of Ethereum Bytecode

2018 ◽  
pp. 513-520 ◽  
Author(s):  
Elvira Albert ◽  
Pablo Gordillo ◽  
Benjamin Livshits ◽  
Albert Rubio ◽  
Ilya Sergey
Keyword(s):  
High Level ◽  
Level Analysis

scholarly journals Prototypical Recombinant Multi-Protease-Inhibitor-Resistant Infectious Molecular Clones of Human Immunodeficiency Virus Type 1

2013 ◽  
Vol 57 (9) ◽  
pp. 4290-4299 ◽  
Author(s):  
Vici Varghese ◽  
Yumi Mitsuya ◽  
W. Jeffrey Fessel ◽  
Tommy F. Liu ◽  
George L. Melikian ◽  
...  
Keyword(s):  
Amino Acid ◽  
Protease Inhibitor ◽  
Cross Resistance ◽  
Amino Acid Substitutions ◽  
Phenotypic Properties ◽  
The Public ◽  
Immunodeficiency Virus ◽  
The Many ◽  
High Level ◽  
Infectious Molecular Clones

ABSTRACTThe many genetic manifestations of HIV-1 protease inhibitor (PI) resistance present challenges to research into the mechanisms of PI resistance and the assessment of new PIs. To address these challenges, we created a panel of recombinant multi-PI-resistant infectious molecular clones designed to represent the spectrum of clinically relevant multi-PI-resistant viruses. To assess the representativeness of this panel, we examined the sequences of the panel's viruses in the context of a correlation network of PI resistance amino acid substitutions in sequences from more than 10,000 patients. The panel of recombinant infectious molecular clones comprised 29 of 41 study-defined PI resistance amino acid substitutions and 23 of the 27 tightest amino acid substitution clusters. Based on their phenotypic properties, the clones were classified into four groups with increasing cross-resistance to the PIs most commonly used for salvage therapy: lopinavir (LPV), tipranavir (TPV), and darunavir (DRV). The panel of recombinant infectious molecular clones has been made available without restriction through the NIH AIDS Research and Reference Reagent Program. The public availability of the panel makes it possible to compare the inhibitory activities of different PIs with one another. The diversity of the panel and the high-level PI resistance of its clones suggest that investigational PIs active against the clones in this panel will retain antiviral activity against most if not all clinically relevant PI-resistant viruses.

The Efficiency of the Greek Lighthouse Network

1998 ◽  
Vol 51 (3) ◽  
pp. 421-429
Author(s):  
Julia Englesou ◽  
Mary Lekakou ◽  
Ernest Tzannatos
Keyword(s):  
Coastal Structures ◽  
Signal Reliability ◽  
Recent Introduction ◽  
Coastal Shipping ◽  
The Many ◽  
High Level

Among the many primary causes which lead to a shipping casualty, those of wrecking, stranding or coming into contact with fixed coastal structures depend (although not exclusively and only under specific conditions of visibility) upon the efficiency of the lighthouse and navigating lights network of a national coastline. The analysis of the shipping casualties involving Greek ships in the Greek seas revealed that, despite the recent introduction of sophisticated navigating aids for the prevention of stranding and contact, the share of the corresponding casualties remains unchanged. It appears that for coastal shipping operations, and in particular for port approaches, the traditional light navigating aids are and will always provide an irreplaceable safety service for navigators. This is mainly attributed to their technological simplicity which offers a high level of signal reliability and friendliness for the navigator.

P–582 High level of concordance between invasive and non-invasive preimplantation genetic testing for aneuploidies (niPGT-A) at day5 and day6–7

2021 ◽  
Vol 36 (Supplement_1) ◽  
Author(s):  
A Biricik ◽  
V Bianchi ◽  
F Lecciso ◽  
M Surdo ◽  
M Manno ◽  
...  
Keyword(s):  
Data Analysis ◽  
Embryo Culture ◽  
Culture Media ◽  
Embryo Biopsy ◽  
Non Invasive ◽  
Culture Time ◽  
Ngs Data Analysis ◽  
High Level ◽  
Ngs Data

Abstract Study question To explore ploidy concordance between invasive and non-invasive PGTA (niPGT-A) at different embryo culture time. Summary answer High level (>84%) of concordance rate for ploidy and sex, sensitivity (>88%), and specificity (76%) were obtained for both day6/7 samples and day5 samples. What is known already The analysis of embryo cell free DNA (cfDNA) that are released into culture media during in vitro embryo development has the potential to evaluate embryo ploidy status. However, obtaining sufficient quality and quantity of cfDNA is essential to achieve interpretable results for niPGT-A. More culture time is expected to be directly proportional to the release of more cfDNA. But embryo culture time is limited due to in-vitro embryo survival potential. Therefore, it is important to estimate the duration of the culture that will provide the maximum cfDNA that can be obtained without adversely affecting the development of the embryo. Study design, size, duration A total of 105 spent culture media (SCM) from day5-day7 blastocyst stage embryos have been included in this cohort study. The cfDNA of SCM samples were amplified and analyzed for niPGT-A by NGS analysis. The SCM samples were divided into 2 subgroups according the embryo culture hours (Day5 and Day6/7 group). The DNA concentration, informativity and euploidy results have then been compared with their corresponding embryos after trophectoderm biopsy (TE) and PGT-A analysis by NGS Participants/materials, setting, methods Embryos cultured until Day3 washed and cultured again in 20µl fresh culture media until embryo biopsy on Day5, 6, or 7. After biopsy SCM samples were immediately collected in PCR tubes and conserved at –20 °C until whole genome amplification by MALBAC® (Yicon Genomics). The TE and SCM samples were analyzed by next-generation sequencing (NGS) using Illumina MiSeq® System. NGS data analysis has been done by Bluefuse Multi Software 4.5 (Illumina) for SCM and TE samples Main results and the role of chance Only the SCM samples which have an embryo with a conclusive result were included in this cohort (n = 105). Overall 97.1% (102/105) of SCM samples gave a successful DNA amplification with a concentration ranging 32.4–128.5ng/µl. Non-informative (NI) results including a chaotic profile (>5 chromosome aneuploidies) were observed in 17 samples, so 83.3%(85/102) of SCM samples were informative for NGS data analysis. Ploidy concordance rate with the corresponding TE biopsies (euploid vs euploid, aneuploid vs aneuploid) was 84.7% (72/85). Sensitivity and specificity were 92,8% and 76,7%, respectively with no significant difference for all parameters for day 6/7 samples compared with day 5 samples. The false-negative rate was 3.5% (3/85), and false-positive rate was 11.7% (10/85). Limitations, reasons for caution The sample size is relatively small. Larger prospective studies are needed. As this is a single-center study, the impact of the variations in embryo culture conditions can be underestimated. Maternal DNA contamination risk cannot be revealed in SCM, therefore the use of molecular markers would increase the reliability. Wider implications of the findings: Non-invasive analysis of embryo cfDNA analyzed in spent culture media demonstrates high concordance with TE biopsy results in both early and late culture time. A non-invasive approach for aneuploidy screening offers important advantages such as avoiding invasive embryo biopsy and decreased cost, potentially increasing accessibility for a wider patient population. Trial registration number Not applicable

scholarly journals GaggleBridge: collaborative data analysis

2011 ◽  
Vol 27 (18) ◽  
pp. 2612-2613 ◽  
Author(s):  
Florian Battke ◽  
Stephan Symons ◽  
Alexander Herbig ◽  
Kay Nieselt
Keyword(s):  
Data Analysis ◽  
Collaborative Data Analysis

scholarly journals Validation of open-source science tools and background model construction in γ-ray astronomy

2019 ◽  
Vol 632 ◽  
pp. A72
Author(s):  
L. Mohrmann ◽  
A. Specovius ◽  
D. Tiziani ◽  
S. Funk ◽  
D. Malyshev ◽  
...  
Keyword(s):  
Cosmic Ray ◽  
Field Of View ◽  
Background Model ◽  
Analysis Approach ◽  
Source Analysis ◽  
Classical Analysis ◽  
Background Estimation ◽  
Likelihood Analysis ◽  
High Level ◽  
Level Analysis

In classical analyses of γ-ray data from imaging atmospheric Cherenkov telescopes (IACTs), such as the High Energy Stereoscopic System (H.E.S.S.), aperture photometry, or photon counting, is applied in a (typically circular) region of interest (RoI) encompassing the source. A key element in the analysis is to estimate the amount of background in the RoI due to residual cosmic ray-induced air showers in the data. Various standard background estimation techniques have been developed in the last decades, most of them rely on a measurement of the background from source-free regions within the observed field of view. However, in particular in the Galactic plane, source analysis and background estimation are hampered by the large number of, sometimes overlapping, γ-ray sources and large-scale diffuse γ-ray emission. For complicated fields of view, a three-dimensional (3D) likelihood analysis shows the potential to be superior to classical analysis. In this analysis technique, a spectromorphological model, consisting of one or multiple source components and a background component, is fitted to the data, resulting in a complete spectral and spatial description of the field of view. For the application to IACT data, the major challenge of such an approach is the construction of a robust background model. In this work, we apply the 3D likelihood analysis to various test data recently made public by the H.E.S.S. collaboration, using the open analysis frameworks ctools and Gammapy. First, we show that, when using these tools in a classical analysis approach and comparing to the proprietary H.E.S.S. analysis framework, virtually identical high-level analysis results, such as field-of-view maps and spectra, are obtained. We then describe the construction of a generic background model from data of H.E.S.S. observations, and demonstrate that a 3D likelihood analysis using this background model yields high-level analysis results that are highly compatible with those obtained from the classical analyses. This validation of the 3D likelihood analysis approach on experimental data is an important step towards using this method for IACT data analysis, and in particular for the analysis of data from the upcoming Cherenkov Telescope Array (CTA).

scholarly journals PENGEMBANGAN MULTIMEDIA PREZI BERBASIS PROBLEM BASED LEARNING (PBL) PADA MATERI HUKUM-HUKUM DASAR KIMIA KELAS X IPA DI SMAN 1 BUKITTINGGI

2018 ◽  
Author(s):  
Dewi Putri Handayani ◽  
Rahadian Zainul ◽  
Fajriah Azra
Keyword(s):  
Data Analysis ◽  
Data Collection ◽  
Learning Process ◽  
Problem Based Learning ◽  
Development Stage ◽  
Chemistry Teacher ◽  
Basic Law ◽  
Chemistry Learning ◽  
High Level ◽  
Very High

Abstract— This research is aimed to produce a prezi multimedia based on Problem Based Learning (PBL) in Basic Law of Chemistry material and to determine the level ov validaty and practicality based on media’s function. This research is Researc and Development (R&D) which applies 4-D madel: define, design, develop, and disseminate. The research is done until development stage. Determining the level of validity and practicality are done by Chemistry lecturer, Chemistry teacher,and students of class XI IPA SMAN 1 Bukittinggi. The research instrument is questionnaire which consists of validity questionnaire and practicality questionnaire. The technic of data collection is done by distributing questionnaire. The data is analyzed by using moment kappa. From the data analysis,it is found that Prezi Multimedia based on Problem Based Learning (PBL) in Basic Law of Chemistry material has moment kappa validity about 0,85 with very high level of validity, moment kappa practicality from teacher’s evaluation about 0,86 with very high level of practicality, and moment kappa practicality from student’s evaluation about 0,80 with high level of practicality. The learning media that have been developed is proved valid and practical, so it can be used on Chemistry learning process in class X IPA at SMAN 1 Bukittinggi.

scholarly journals Perceptions of English Education Program Students Towards The Profesionalism of English Education Lecturers in Online Learning at IAIN Parepare

2020 ◽  
Vol 2 (2) ◽  
pp. 70-76
Author(s):  
Mujahidah ◽  
Nur Afiah ◽  
Syaiful
Keyword(s):  
Online Learning ◽  
Data Analysis ◽  
Quantitative Study ◽  
Education Program ◽  
Online Teaching ◽  
English Education ◽  
Teaching Skills ◽  
High Level ◽  
Survey Approach

Perception can be interpreted as a process of giving meaning to a phenomenon, event or object. professionalism is interpreted as a professional trait. Those traits are mastering the Science in their field and have high skills in carrying out their duties. This Study aimed to describe the students' perceptions of professionalism lecturer English Education Program, State Islamic Institute of Parepare. To achieve this goal a questionnaire was distributed to 50 students (40% of the population). This Research is a descriptive quantitative study with a survey approach. The data processed using simple tabulation techniques and the data qualitatively interpreted. There are five aspects of the professionalism observed, namely: the ability to speak English, online teaching skills, insights, timeliness and using of online learning application. By the results of data analysis found that, the lecturers of English Education Program, State Islamic Institute of Parepare has a high level of professionalism.

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