scholarly journals An in silico study on molecular level interactions of host Siderocalin with siderophores from Mycobacterium tuberculosis and other bacterial species

2014 ◽  
Vol 14 (S3) ◽  
Author(s):  
Tanu Goyal ◽  
Sharmila Anishetty
2018 ◽  
Vol 3 (3) ◽  
pp. 101-108 ◽  
Author(s):  
Sherry Aristyani ◽  
M. Irsyad Nur ◽  
Sri Widyarti ◽  
Sutiman B. Sumitro

Curcuma xanthorrhiza Roxb and Tamarindus indica L. have been used for a long time by Indonesia local societies as tuberculosis therapy. This study explores the active compounds of Curcuma xanthorrhiza Roxb and Tamarindus indica L that important for suppressing the survival of Mycobacterium tuberculosis and predicts the pharmacokinetics and toxicity of the compounds. stringApp of Cytoscape 3.6.0 was used for screening the compounds targeting mycobacteria proteins, then computational tools like SwissADME (http://swissadme.ch/) and admetSAR (http://lmmd.ecust.edu.cn/admetsar1/predict/) were applied for estimating absorption, distribution, metabolism, excretion, and toxicity (ADMET) of active compounds. The result has been shown that there were some active compounds could target proteins of Mycobacterium tuberculosis. According to the profiling result, these compounds had a various characteristic in gastrointestinal absorption, could pass the blood-brain barrier, and had drug-like properties. In toxicity term, the active compounds did not cause Ames toxicity.


2018 ◽  
Vol 37 (11) ◽  
pp. 2913-2925 ◽  
Author(s):  
Juan Wang ◽  
Chenxi Zhao ◽  
Jing Tu ◽  
Hong Yang ◽  
Xiaoyun Zhang ◽  
...  

2021 ◽  
Vol 7 (2) ◽  
pp. 13193-13207
Author(s):  
Antônio Edilson Sousa do N. Júnior ◽  
Marlice Cruz Martelli ◽  
Luiz Cláudio Acácio Barbosa Filho ◽  
Davi do Socorro Barros Brasil ◽  
Cláudio Nahum Alves

RSC Advances ◽  
2017 ◽  
Vol 7 (62) ◽  
pp. 39185-39196 ◽  
Author(s):  
Bowen Tang ◽  
Baicun Li ◽  
Boqun Li ◽  
Zan Li ◽  
Jingbo Qin ◽  
...  

All atoms MD simulations for the complexes of WT/V155M hSTING and 2′3′-cGAMP were performed to study the effect of the V155M mutation on SAVI disease at the molecular level.


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