scholarly journals Histopathological findings in Dalmatian pelicans (Pelecanus crispus) naturally infected with avian influenza subtype A H5N1 in Bulgaria

2018 ◽  
Vol 68 (3) ◽  
pp. 369 ◽  
Author(s):  
G. M. STOIMENOV ◽  
G. V. GOUJGOULOVA ◽  
B. NIKOLOV ◽  
R. PETROVA ◽  
A. TENEVA ◽  
...  

The aim of this study is to estimate the histopathological changes in visceral organs of naturally infected with the avian influenza virus (AIV) subtype A H5N1 dalmatian pelicans in Bulgaria. The identified gross lesions are: haemorrhagic small intestine, sparse content in gizzard and proventriculus, well defined hyperemia of the tracheal mucosa associated with petechiae, as well as meningeal and brain congestion. The infected birds exhibited the following histopathological changes: edema of the tracheal mucosa with loss of mucosal glands, mild to moderate congestion with focal necrosis and multifocal non suppurative encephalitis and gliosis, mononuclear infiltration in the cecum, and diffuse mononuclear infiltration in the submucosa of the small intestine. The virus was detected by virus isolation (VI) and RT-PCR from tissue samples (lung, trachea, small intestine, brain, proventriculus, cloaca) from the infected birds.

Author(s):  
Shalini Yaduvanshi ◽  
Rashmi Singh ◽  
Shyama N. Prabhu ◽  
Ajay Pratap Singh ◽  
Renu Singh ◽  
...  

Background: Rotaviruses are important cause of acute gastroenteritis. Group A and D rotavirus are the predominant enteric viruses groups in birds. Outbreaks of rotavirus may lead to significant economic losses in poultry industry. Rotavirus infection alters the function of the small intestinal epithelium, resulting in diarrhea. Methods: Poultry intestinal samples were collected in 10% formalin and duodenum, jejunum and ileum were processed for histopathological examination by H and E staining. Result: Histopathological changes were noticed in all the three parts of the small intestine namely duodenum, jejunum and ileum in poultry intestinal content sample positive for AvRVD in RT-PCR. Duodenum showed necrosis, desquamation and loss of enterocytes from the villi. The jejunum showed severe disruption of villous architecture with vacuolation and separation of mucosal epithelial layer. Ileum showed a complete loss of enterocytes from the villous surface, congestion at the villous tips and infiltration of lymphocytes throughout the mucosa as well as submucosa.


2021 ◽  
pp. 104063872199481
Author(s):  
Yixin Xiao ◽  
Fan Yang ◽  
Fumin Liu ◽  
Hangping Yao ◽  
Nanping Wu ◽  
...  

The H2 subtypes of avian influenza A viruses (avian IAVs) have been circulating in poultry, and they have the potential to infect humans. Therefore, establishing a method to quickly detect this subtype is pivotal. We developed a TaqMan minor groove binder real-time RT-PCR assay that involved probes and primers based on conserved sequences of the matrix and hemagglutinin genes. The detection limit of this assay was as low as one 50% egg infectious dose (EID50)/mL per reaction. This assay is specific, sensitive, and rapid for detecting avian IAV H2 subtypes.


2014 ◽  
Vol 6 (8) ◽  
pp. 2628 ◽  
Author(s):  
Ling Zhu ◽  
Cancan Zhu ◽  
Guoqing Deng ◽  
Long Zhang ◽  
Shumi Zhao ◽  
...  

2009 ◽  
Vol 39 (5) ◽  
pp. 1445-1451 ◽  
Author(s):  
Helena Lage Ferreira ◽  
Fernando Rosado Spilki ◽  
Márcia Mercês Aparecida Bianchi dos Santos ◽  
Renata Servan de Almeida ◽  
Clarice Weis Arns

Avian metapneumovirus (AMPV) belongs to Metapneumovirus genus of Paramyxoviridae family. Virus isolation, serology, and detection of genomic RNA are used as diagnostic methods for AMPV. The aim of the present study was to compare the detection of six subgroup A AMPV isolates (AMPV/A) viral RNA by using different conventional and real time RT-PCR methods. Two new RT-PCR tests and two real time RT-PCR tests, both detecting fusion (F) gene and nucleocapsid (N) gene were compared with an established test for the attachment (G) gene. All the RT-PCR tested assays were able to detect the AMPV/A. The lower detection limits were observed using the N-, F- based RRT-PCR and F-based conventional RT-PCR (10(0.3) to 10¹ TCID50 mL-1). The present study suggests that the conventional F-based RT-PCR presented similar detection limit when compared to N- and F-based RRT-PCR and they can be successfully used for AMPV/A detection.


2017 ◽  
Vol 33 (1) ◽  
pp. 8-15
Author(s):  
LR Barman ◽  
RD Sarker ◽  
BC Das ◽  
EH Chowdhury ◽  
PM Das ◽  
...  

A virological survey for avian influenza (AI) and Newcastle disease (ND) was conducted in two selected live bird markets (LBMs), namely Kaptan Bazar and Karwan Bazar in Dhaka city, Bangladesh from August 2011 to July 2012. A total of 513 dead chickens were collected. An immune-chromatographic rapid antigen test for Type A influenza virus and both conventional and real time RT-PCR were used for the detection and characterization of AI and ND viruses. All carcasses were first screened by the rapid antigen test kit and 93 were positive for Type A influenza virus. RT-PCR on a representative number of rapid antigen test positive samples (n = 24) confirmed the presence of Type A influenza virus and mostly H5 influenza virus (22 out of 24 tested samples). Influenza rapid test negative samples (n = 420) were subjected to routine necropsy. Heat stress, suffocation and physical injury were the most common cause of mortality (163 cases), followed by ND, suspected to be the cause of 85 deaths. On molecular investigation of these 85 samples, the presence of ND virus was confirmed in 59 and AI virus in 6; 15 were negative for both ND and AI viruses and 5 were unsuitable for investigation. Among the 59 ND confirmed cases 18 also contained AI virus. In summary, out of 513 carcasses 117 (22.81%) contained AI virus and 59 (11.50%) contained ND virus. Eighteen (3.51%) carcasses contained both AI and ND viruses. The findings suggest that both AI and ND should be considered as major threats to the poultry industry.Bangl. vet. 2016. Vol. 33, No. 1, 8-15


2018 ◽  
Vol 56 (2) ◽  
pp. 220-229 ◽  
Author(s):  
Lorella Maniscalco ◽  
Silvia Guil-Luna ◽  
Selina Iussich ◽  
Francesca Gattino ◽  
Calogero Trupia ◽  
...  

RON is a tyrosine kinase receptor activated by the macrophage-stimulating protein (MSP) ligand that is overexpressed in human breast cancer. In humans, RON protein can be present in different isoforms, and the most studied isoform is represented by the short form of RON ( sf-RON), which is generated by an alternative promoter located in intron 10 of the RON complementary DNA (cDNA). It plays an important role in breast cancer progression. Considering the many similarities between feline mammary carcinoma (FMC) and human breast cancer, the aim of this study was to investigate the expression of both RON and MSP in FMCs and to identify the presence of the sf-RON transcript. Tissue samples of spontaneous mammary tumors were collected from 60 queens (10 benign lesions, 50 carcinomas). All of the samples were tested for RON and MSP expression by immunohistochemistry; moreover, RNA was extracted from paraffin-embedded tissue samples, and the cDNA was tested by reverse transcription–polymerase chain reaction (RT-PCR) to identify the presence of sf-RON. Immunohistochemistry detected the expression of RON and MSP in 34 of 50 (68%) and 29 of 50 (58%) FMCs, respectively. RT-PCR revealed the presence of the short-form in 18 of 47 (38%) FMCs. This form originates, as in humans, from an alternative promoter (P2), and it codes for the proper feline short form ( sf-RON). sf-RON expression was associated with poorly differentiated tumors and with a shorter disease-free ( P < .05; hazard ratio [HR], 2.2) period and a shorter survival ( P < .05; HR, 2.2). These results support FMC as a suitable model in comparative oncology and identify sf-RON expression as potential predictor of outcomes for this disease.


2017 ◽  
Vol 9 (1) ◽  
Author(s):  
Xin Wang ◽  
Shisong Fang

ObjectiveTo determine avian influenza A(H5N6) virus infection in humanand environment using extensive surveillances. To evaluate theprevalence of H5N6 infection among high risk population.IntroductionSince the emergence of avian influenza A(H7N9) virus in 2013,extensive surveillances have been established to monitor the humaninfection and environmental contamination with avian influenza virusin southern China. At the end of 2015, human infection with influenzaA(H5N6) virus was identified in Shenzhen for the first time throughthese surveillances. These surveillances include severe pneumoniascreening, influenza like illness (ILI) surveillance, follow-up onclose contact of the confirmed case, serological survey among poultryworkers, environment surveillance in poultry market.MethodsSevere pneumonia screening was carried out in all hospitals ofShenzhen. When a patient with severe pneumonia is suspected forinfection with avian influenza virus, after consultation with at leasttwo senior respiratory physicians from the designated expert paneland gaining their approval, the patient will be reported to local CDC,nasal and pharyngeal swabs will be collected and sent for detectionof H5N6 virus by RT-PCR.ILI surveillance was conducted in 11 sentinel hospitals, 5-20 ILIcases were sampled for detection of seasonal influenza virus by RT-PCR test every week for one sentinel. If swab sample is tested positivefor influenza type A and negative for subtypes of seasonal A(H3N2)and A(H1N1), it will be detected further for influenza A(H5N6) virus.Follow-up on close contacts was immediately carried out whenhuman case of infection with H5N6 was identified. All of closecontacts were requested to report any signs and symptoms of acuterespiratory illness for 10 days, nasal and pharyngeal swabs werecollected and tested for influenza A(H5N6) virus by RT-PCR test.In the meantime, environmental samples were collected in the marketwhich was epidemiologically associated with patient and tested forH5N6 virus by RT-PCR test.Serological survey among poultry workers was conducted in tendistricts of Shenzhen. Poultry workers were recruited in poultrymarkets and screened for any signs and symptoms of acute respiratoryillness, blood samples were collected to detect haemagglutination-inhibition (HI) antibody for influenza A(H5N6) virus.Environment surveillance was conducted twice a month in tendistricts of Shenzhen. For each district, 10 swab samples werecollected at a time. All environmental samples were tested forinfluenza A(H5N6) virus by RT-PCR test.ResultsFrom Nov 1, 2015 to May 31, 2016, 50 patients with severepneumonia were reported and detected for H5N6 virus, three patientswere confirmed to be infected with H5N6 virus. Case 1 was a 26 yearsold woman and identified on Dec 29, 2015. She purchased a duck ata live poultry stall of nearby market, cooked and ate the duck 4 daysbefore symptom onset. After admission to hospital on Dec 27, hercondition deteriorated rapidly, on Dec 30 she died. The case 2 was a25 years old man and confirmed on Jan 7, 2016. He visited a marketeveryday and had no close contact with poultry, except for passingby live poultry stalls. He recovered and was discharged from hospitalon Jan 22. The case 3 was is a 31 years old woman and reported onJan 16, 2016, she had no contact with live poultry and died on Feb 8.For 60 close contacts of three cases, none of them reported signsor symptoms of acute respiratory illness, all of nasal and pharyngealswabs were tested negative for influenza A(H5N6) virus by RT-PCRtest. Of 146 environmental swabs collected in the case’s living placesand relevant poultry markets, 38 were tested positive for influenzaA(H5N6) virus by RT-PCR test.From Nov 1, 2015 to May 31, 2016, 2812 ILI cases were sampledand tested for influenza type A and subtypes of seasonal influenza.Those samples tested positive for influenza type A could be furthersubtyped to seasonal A(H3N2) or A(H1N1), therefore no sample fromILI case was tested for influenza A(H5N6) virus.Serological surveys among poultry workers were conductedtwice, for the first survey 186 poultry workers were recruited in Oct2015, for the second survey 195 poultry workers were recruited inJan 2016. Blood sample were collected and tested for HI antibodyof influenza A(H5N6) virus. 2 individuals had H5N6 HI antibodytiter of 1:40, 5 individuals had H5N6 HI antibody titer of 1:20, rest ofthem had H5N6 HI antibody titer of <1:20. According to the WHOguideline, HI antibody titer of≥1:160 against avian influenza viruswere considered positive.From Nov 1, 2015 to May 31, 2016, of 1234 environmental swabscollected in poultry markets, 339 (27.5%)were tested positive forinfluenza A(H5N6) virus by RT-PCR test. Each of the ten districtshad poultry markets which was contaminated by influenza A(H5N6)virus.ConclusionsIn 2015-2016 winter, three cases of infection with influenzaA(H5N6) virus were identified in Shenzhen, all of them were youngindividuals with average age of 27.3 years and developed severepneumonia soon after illness onset, two cases died. For acute andsevere disease, early detection and treatment is the key measure forpatient’s prognosis.H5N6 virus was identified in poultry market and other placeswhere patient appeared, implying poultry market probably was thesource of infection. Despite the high contamination rate of H5N6virus in poultry market, we found that the infection with H5N6 virusamong poultry workers was not prevalent, with infection rate being0/381. Human infection with H5N6 virus seemed to be a sporadicoccurrence, poultry-human transmission of H5N6 virus might not bevery effective.


Plant Disease ◽  
2021 ◽  
Author(s):  
Gardenia Orellana ◽  
Alexander V Karasev

Coleus scutellarioides (syn. Coleus blumei) is a widely grown evergreen ornamental plant valued for its highly decorative variegated leaves. Six viroids, named Coleus blumei viroid 1 to 6 (CbVd-1 to -6) have been identified in coleus plants in many countries of the world (Nie and Singh 2017), including Canada (Smith et al. 2018). However there have been no reports of Coleus blumei viroids occurring in the U.S.A. (Nie and Singh 2017). In April 2021, leaf tissue samples from 27 cultivars of C. blumei, one plant of each, were submitted to the University of Idaho laboratory from a commercial nursery located in Oregon to screen for the presence of viroids. The sampled plants were selected randomly and no symptoms were apparent in any of the samples. Total nucleic acids were extracted from each sample (Dellaporta et al. 1983) and used in reverse-transcription (RT)-PCR tests (Jiang et al. 2011) for the CbVd-1 and CbVd-5 with the universal primer pair CbVds-P1/P2, which amplifies the complete genome of all members in the genus Coleviroid (Jiang et al. 2011), and two additional primer pairs, CbVd1-F1/R1 and CbVd5-F1/R1, specific for CbVd-1 and CbVd-5, respectively (Smith et al. 2018). Five C. blumei plants (cvs Fire Mountain, Lovebird, Smokey Rose, Marrakesh, and Nutmeg) were positive for a coleviroid based on the observation of the single 250-nt band in the RT-PCR test with CbVds-P1/P2 primers. Two of these CbVd-1 positive plants (cvs Lovebird and Nutmeg) were also positive for CbVd-1 based on the presence of a single 150-nt band in the RT-PCR assay with CbVd1-F1/R1 primers. One plant (cv Jigsaw) was positive for CbVd-1, i.e. showing the 150-nt band in RT-PCR with CbVd1-F1/R1 primers, but did not show the ca. 250-bp band in RT-PCR with primers CbVds-P1/P2. None of the tested plants were positive for CbVd-5, either with the specific, or universal primers. All coleviroid- and CbVd-1-specific PCR products were sequenced directly using the Sanger methodology, and revealed whole genomes for five isolates of CbVd-1 from Oregon, U.S.A. The genomes of the five CbVd-1 isolates displayed 96.9-100% identity among each other and 96.0-100% identity to the CbVd-1 sequences available in GenBank. Because the sequences from cvs Lovebird, Marrakesh, and Nutmeg, were found 100% identical, one sequence was deposited in GenBank (MZ326145). Two other sequences, from cvs Fire Mountain and Smokey Rose, were deposited in the GenBank under accession numbers MZ326144 and MZ326146, respectively. To the best of our knowledge, this is the first report of CbVd-1 in the United States.


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