scholarly journals Preanalytical Conditions and DNA Isolation Methods Affect Telomere Length Quantification in Whole Blood

PLoS ONE ◽  
2015 ◽  
Vol 10 (12) ◽  
pp. e0143889 ◽  
Author(s):  
Alexander Tolios ◽  
Daniel Teupser ◽  
Lesca M. Holdt
PLoS ONE ◽  
2013 ◽  
Vol 8 (8) ◽  
pp. e72349 ◽  
Author(s):  
Anne J. M. Loonen ◽  
Martine P. Bos ◽  
Bart van Meerbergen ◽  
Sigi Neerken ◽  
Arnold Catsburg ◽  
...  

2020 ◽  
Vol 7 (6) ◽  
pp. 192136 ◽  
Author(s):  
Mats Olsson ◽  
Nicholas J. Geraghty ◽  
Erik Wapstra ◽  
Mark Wilson

Telomeres are repeat sequences of non-coding DNA-protein molecules that cap or intersperse metazoan chromosomes. Interest in telomeres has increased exponentially in recent years, to now include their ongoing dynamics and evolution within natural populations where individuals vary in telomere attributes. Phylogenetic analyses show profound differences in telomere length across non-model taxa. However, telomeres may also differ in length within individuals and between tissues. The latter becomes a potential source of error when researchers use different tissues for extracting DNA for telomere analysis and scientific inference. A commonly used tissue type for assessing telomere length is blood, a tissue that itself varies in terms of nuclear content among taxa, in particular to what degree their thrombocytes and red blood cells (RBCs) contain nuclei or not. Specifically, when RBCs lack nuclei, leucocytes become the main source of telomeric DNA. RBCs and leucocytes differ in lifespan and how long they have been exposed to ‘senescence' and erosion effects. We report on a study in which cells in whole blood from individual Australian painted dragon lizards ( Ctenophorus pictus ) were identified using flow cytometry and their telomere length simultaneously measured. Lymphocyte telomeres were on average 270% longer than RBC telomeres, and in azurophils (a reptilian monocyte), telomeres were more than 388% longer than those in RBCs. If this variation in telomere length among different blood cell types is a widespread phenomenon, and DNA for comparative telomere analyses are sourced from whole blood, evolutionary inference of telomere traits among taxa may be seriously complicated by the blood cell type comprising the main source of DNA.


1992 ◽  
Vol 38 (1) ◽  
pp. 65-68 ◽  
Author(s):  
Ken F. Jarrell ◽  
David Faguy ◽  
Anne M. Hebert ◽  
Martin L. Kalmokoff

High molecular weight DNA was readily isolated from all methanogens treated, as well as from thermophilic anaerobic eubacteria, by grinding cells frozen in liquid N2, prior to lysis with SDS. DNA can subsequently be purified by the usual phenol–chloroform extractions. The procedure yields DNA readily cut by restriction enzymes and suitable for oligonucleotide probing, as well as for mole percent G + C content determination by thermal denaturation. The method routinely yields DNA of high molecular weight and is an improvement over DNA isolation methods for many methanogens, which often involve an initial breakage of the cells in a French pressure cell. Key words: methanogens, archaebacteria, archaea, DNA isolation.


2021 ◽  
Author(s):  
Bruno Marçal Repolês ◽  
Choco Michael Gorospe ◽  
Phong Tran ◽  
Anna Karin Nilsson ◽  
Paulina H. Wanrooij

AbstractThe integrity of mitochondrial DNA (mtDNA) isolated from solid tissues is critical for analyses such as long-range PCR. We show that a commonly-used DNA isolation procedure preferentially introduces strand breaks into the mtDNA extracted from the skeletal muscle of aged mice, while mtDNA from adult animals is less affected. We present a comparison of mtDNA isolation methods and identify one that avoids this biased loss of muscle mtDNA integrity. Our results highlight the importance of a careful choice of mtDNA isolation method and serve as a resource to researchers planning analysis of mtDNA isolated from solid tissues.


2020 ◽  
Vol 10 (01) ◽  
pp. 1-13
Author(s):  
Barbara Bánkuti ◽  
Zoltán Tudós ◽  
Susan Szathmary ◽  
László Stipkovits ◽  
Zsófia Sipos-Kozma ◽  
...  

2007 ◽  
Vol 380 (1-2) ◽  
pp. 112-117 ◽  
Author(s):  
Young Geun Yang ◽  
Jong Yeol Kim ◽  
Young-Han Song ◽  
Doo-Sik Kim

2018 ◽  
Vol 25 (3) ◽  
pp. 915-923 ◽  
Author(s):  
Barbara Kinga Barták ◽  
Alexandra Kalmár ◽  
Orsolya Galamb ◽  
Barnabás Wichmann ◽  
Zsófia Brigitta Nagy ◽  
...  

1998 ◽  
Vol 44 (10) ◽  
pp. 2201-2204 ◽  
Author(s):  
Jacques B de Kok ◽  
Jan C M Hendriks ◽  
Wouter W van Solinge ◽  
Hans L Willems ◽  
Ewald J Mensink ◽  
...  

2017 ◽  
Vol 56 (9) ◽  
pp. 700-708 ◽  
Author(s):  
Yvonne Lisa Behrens ◽  
Kathrin Thomay ◽  
Maike Hagedorn ◽  
Juliane Ebersold ◽  
Lea Henrich ◽  
...  

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