Fine-scale Spatial Genetic Structure of a Small Natural Stand of Populus davidiana in South Korea using AFLP markers

2016 ◽  
Vol 105 (3) ◽  
pp. 309-314
Author(s):  
Kyung Nak Hong
Keyword(s):  
Genetic Structure ◽  
South Korea ◽  
Spatial Genetic Structure ◽  
Aflp Markers ◽  
Fine Scale ◽  
Natural Stand ◽  
Populus Davidiana

Fine-scale genetic structure in populations of Quercus variabilis (Fagaceae) from southern Korea

2002 ◽  
Vol 80 (10) ◽  
pp. 1034-1041 ◽  
Author(s):  
Mi Yoon Chung ◽  
Myong Gi Chung
Keyword(s):  
Genetic Structure ◽  
South Korea ◽  
Spatial Autocorrelation ◽  
Spatial Genetic Structure ◽  
Fine Scale ◽  
Genetic Structuring ◽  
Quercus Variabilis ◽  
Southern Korea ◽  
Allozyme Loci ◽  
Landscape Level

Quercus variabilis Blume (Fagaceae) is a deciduous broad-leaved tree, and an important forest element among the hillsides of southern Korea. To date, there are contrasting results with respect to fine-scale spatial genetic structure among adults in populations of several oak species; some studies have shown evidence of significant within-population spatial genetic structure, while others found weak or little evidence of fine-scale genetic structuring within populations. We used allozyme loci, Wright's F statistics, and multilocus spatial autocorrelation statistics to examine the distribution of genetic diversity and the spatial genetic structure within three undisturbed populations at a landscape level (72.5 ha, 500 × 1450 m) on Dolsan Island, South Korea. The spatial autocorrelation analyses of adults showed little evidence of fine-scale genetic structuring within populations, which could be due to random mortality among related seedlings, resulting in extensive thinning within maternal half-sib groups. Alternatively, low genetic differentiation between adjacent populations (mean FST = 0.023) and little within-population spatial genetic structure suggest probable secondary acorn movement by animals. Our results are very similar to those observed in three populations of Quercus acutissima at a landscape level (15 ha, 250 × 600 m) on Oenaro Island, South Korea. Together, these studies describe relatively subtle differences in genetic structure among adjacent populations of oaks on southern islands in Korea.Key words: allozymes, Quercus variabilis, Fagaceae, landscape level, multiple populations, spatial genetic structure.

scholarly journals Fine-scale spatial genetic structure of sycamore maple (Acer pseudoplatanus L.)

2011 ◽  
Vol 131 (3) ◽  
pp. 739-746 ◽  
Author(s):  
Madhav Pandey ◽  
Oliver Gailing ◽  
Hans H. Hattemer ◽  
Reiner Finkeldey
Keyword(s):  
Genetic Structure ◽  
Spatial Genetic Structure ◽  
Acer Pseudoplatanus ◽  
Fine Scale ◽  
Sycamore Maple

scholarly journals Spatial genetic structure of the sea sandwort (<i>Honckenya peploides</i>) on Surtsey: an immigrant's journey

2014 ◽  
Vol 11 (22) ◽  
pp. 6495-6507 ◽  
Author(s):  
S. H. Árnason ◽  
Ǽ. Th. Thórsson ◽  
B. Magnússon ◽  
M. Philipp ◽  
H. Adsersen ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Genetic Structure ◽  
Early Stage ◽  
Isolation By Distance ◽  
Spatial Genetic Structure ◽  
Rapid Expansion ◽  
Aflp Markers ◽  
Plant Colonization ◽  
Southern Coast ◽  
Binary Matrix

Abstract. Sea sandwort (Honckenya peploides) was one of the first plants to successfully colonize and reproduce on the volcanic island Surtsey, formed in 1963 off the southern coast of Iceland. Using amplified fragment length polymorphic (AFLP) markers, we examined levels of genetic variation and differentiation among populations of H. peploides on Surtsey in relation to populations on the nearby island Heimaey and from the southern coast of Iceland. Selected populations from Denmark and Greenland were used for comparison. In addition, we tested whether the effects of isolation by distance could be seen in the Surtsey populations. Using two primer combinations, we obtained 173 AFLP markers from a total of 347 plant samples. The resulting binary matrix was then analysed statistically. The main results include the following: (i) Surtsey had the highest proportion of polymorphic markers as well as a comparatively high genetic diversity (55.5% proportion of polymorphic loci, PLP; 0.1974 HE) and Denmark the lowest (31.8% PLP; 0.132 HE), indicating rapid expansion during an early stage of population establishment on Surtsey and/or multiple origins of immigrants; (ii) the total genetic differentiation (FST) among Surtsey (0.0714) and Heimaey (0.055) populations was less than half of that found among the mainland populations in Iceland (0.1747), indicating substantial gene flow on the islands; (iii) most of the genetic variation (79%, p < 0.001) was found within localities, possibly due to the outcrossing and subdioecious nature of the species; (iv) a significant genetic distance was found within Surtsey, among sites, and this appeared to correlate with the age of plant colonization; and (v) the genetic structure analysis indicated multiple colonization episodes on Surtsey, whereby H. peploides most likely immigrated from the nearby island of Heimaey and directly from the southern coast of Iceland.

scholarly journals Are patterns of fine-scale spatial genetic structure consistent between sites within tropical tree species?

PLoS ONE ◽  
2018 ◽  
Vol 13 (3) ◽  
pp. e0193501
Author(s):  
James R. Smith ◽  
Jaboury Ghazoul ◽  
David F. R. P. Burslem ◽  
Akira Itoh ◽  
Eyen Khoo ◽  
...  
Keyword(s):  
Genetic Structure ◽  
Tree Species ◽  
Spatial Genetic Structure ◽  
Tropical Tree ◽  
Fine Scale ◽  
Tropical Tree Species

Genetic rescue by distant trees mitigates qualitative pollen limitation imposed by fine‐scale spatial genetic structure

2019 ◽  
Vol 28 (19) ◽  
pp. 4363-4374 ◽  
Author(s):  
Antonio R. Castilla ◽  
Pedro J. Garrote ◽  
Magdalena Żywiec ◽  
Gemma Calvo ◽  
Alberto Suárez‐Esteban ◽  
...  
Keyword(s):  
Genetic Structure ◽  
Pollen Limitation ◽  
Spatial Genetic Structure ◽  
Fine Scale ◽  
Genetic Rescue

Staying close: short local dispersal distances on a managed forest of two Patagonian Nothofagus species

2020 ◽  
Vol 93 (5) ◽  
pp. 652-661 ◽  
Author(s):  
Georgina Sola ◽  
Verónica El Mujtar ◽  
Leonardo Gallo ◽  
Giovanni G Vendramin ◽  
Paula Marchelli
Keyword(s):  
Gene Flow ◽  
Genetic Structure ◽  
Spatial Genetic Structure ◽  
Pollen Dispersal ◽  
Dispersal Distance ◽  
Restricted Gene Flow ◽  
Fine Scale ◽  
Gene Dispersal ◽  
Mature Trees ◽  
The Impact

Abstract Understanding the impact of management on the dispersal potential of forest tree species is pivotal in the context of global change, given the implications of gene flow on species evolution. We aimed to determine the effect of logging on gene flow distances in two Nothofagus species from temperate Patagonian forests having high ecological relevance and wood quality. Therefore, a total of 778 individuals (mature trees and saplings) of Nothofagus alpina and N. obliqua, from a single plot managed 20 years ago (2.85 hectares), were mapped and genotyped at polymorphic nuclear microsatellite loci. Historical estimates of gene dispersal distance (based on fine-scale spatial genetic structure) and contemporary estimates of seed and pollen dispersal (based on spatially explicit mating models) were obtained. The results indicated restricted gene flow (gene distance ≤ 45 m, both pollen and seed), no selfing and significant seed and pollen immigration from trees located outside the studied plot but in the close surrounding area. The size of trees (diameter at breast height and height) was significantly associated with female and/or male fertility. The significant fine-scale spatial genetic structure was consistent with the restricted seed and pollen dispersal. Moreover, both estimates of gene dispersal (historical and contemporary) gave congruent results. This suggests that the recent history of logging within the study area has not significantly influenced on patterns of gene flow, which can be explained by the silviculture applied to the stand. The residual tree density maintained species composition, and the homogeneous spatial distribution of trees allowed the maintenance of gene dispersal. The short dispersal distance estimated for these two species has several implications both for understanding the evolution of the species and for defining management, conservation and restoration actions. Future replication of this study in other Nothofagus Patagonian forests would be helpful to validate our conclusions.

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