scholarly journals Phylogeny of Dorstenia (Moraceae) reveals the polyphyletic nature of its neotropical sections

Rodriguésia ◽  
2021 ◽  
Vol 72 ◽  
Author(s):  
Marcelo Dias Machado Filho ◽  
Leandro Cardoso Pederneiras ◽  
Vitor Hugo Maia ◽  
Andrea Ferreira da Costa ◽  
Vidal de Freitas Mansano
Keyword(s):  
Molecular Markers ◽  
Sister Group ◽  
The Other ◽  
Morphological Similarity ◽  
African Species ◽  
Neotropical Species ◽  
Main Clade ◽  
Morphological Studies ◽  
Phylogenetic Studies ◽  
Molecular Phylogenetic

Abstract Dorstenia, the second largest genus of Moraceae, comprises nine sections that are mainly found in Africa and America. Two of them are woody macrospermous, and the other seven are herbaceous microspermous. There are three sections in the Neotropics, all of which are herbaceous and taxonomically complex owing to their great morphological similarity. The most recent molecular phylogenetic studies of Dorstenia suggested that the neotropical sections are polyphyletic. These studies also showed that the neotropical species represent a sister group to an African woody macrospermous grade rather than African herbaceous microspermous plants. We have now expanded the number of taxa sampled and included other molecular markers to determine whether the previous phylogeny are to be corroborated or whether new taxonomic interpretations are to be followed. This study inferred the phylogeny of the group based on ITS, ETS, and trnL-F regions from 40 of the 58 neotropical species and added a new African taxon, thus including 17 of the 60 known species. Our results reaffirmed the polyphyletic nature of the neotropical sections. Dorstenia sect. Acauloma emerged within the main clade of D. sect. Kosaria (both African species), a result that confirms the affinity of these taxa already observed in previous morphological studies. We suggest Dorstenia sect. Dorstenia as the only neotropical section.

Morphology-based phylogeny of the suckermouth armored catfishes, with emphasis on the Neoplecostominae (Teleostei: Siluriformes: Loricariidae)

Zootaxa ◽  
2017 ◽  
Vol 4264 (1) ◽  
pp. 1 ◽  
Author(s):  
EDSON H. L. PEREIRA ◽  
ROBERTO E. REIS
Keyword(s):  
Sister Group ◽  
The Other ◽  
Maximum Parsimony Analysis ◽  
Phylogenetic Study ◽  
Parsimony Analysis ◽  
Phenotypic Characters ◽  
Incertae Sedis ◽  
Phylogenetic Studies ◽  
Molecular Phylogenetic ◽  
First Time

A phylogenetic study of the Loricariidae with emphasis on the Neoplecostominae is presented based on a maximum parsimony analysis of 268 phenotypic characters encompassing osteology, arthrology, and external morphology. Results support previous hypotheses of the monophyly of the Neoplecostominae and each of the included genera: Hirtella, Isbrueckerichthys, Kronichthys, Neoplecostomus, Pareiorhaphis, and Pareiorhina. In addition, previously undiscovered diversity was revealed within the subfamily as an additional genus-level taxon, herein described as Euryochus. Relationships among neoplecostomine genera are: (Kronichthys (Euryochus ((Hirtella + Pareiorhaphis) (Pareiorhina (Isbrueckerichthys + Neoplecostomus))))). Additional undescribed diversity was also detected among most neoplecostomine genera and the Hypoptopomatinae. In addition, recently discovered genera Nannoplecostomus and Microplecostomus were included in the analysis, and were identified as sequential sister-taxa to Neoplecostominae + Hypoptopomatinae, which are currently not included in any subfamily and regarded as incertae sedis in Loricariidae. The three species of Lithogenes were included in an encompassing phylogenetic analysis for the first time, and were identified as a monophyletic unit and sister group to all remaining loricariids. The other loricariid subfamilies were also corroborated as monophyletic, and presented the following interrelationships (Lithogeninae (Delturinae (Loricariinae (Hypostominae (Nannoplecostomus (Microplecostomus (Hypoptopomatinae + Neoplecostominae). The Neoplecostominae and its genera are phylogenetically diagnosed, and hypothesized relationships are compared to those of previous morphological and molecular phylogenetic studies.

scholarly journals Fungi of entomopathogenic potential in Chytridiomycota and Blastocladiomycota, and in fungal allies of the Oomycota and Microsporidia

IMA Fungus ◽  
2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Agata Kaczmarek ◽  
Mieczysława I. Boguś
Keyword(s):  
Biological Control Agent ◽  
Sister Group ◽  
Control Agent ◽  
Scale Insects ◽  
Black Flies ◽  
Larval Stages ◽  
Phylogenetic Studies ◽  
Lady Beetles ◽  
Molecular Phylogenetic ◽  
The Relationship

AbstractThe relationship between entomopathogenic fungi and their insect hosts is a classic example of the co-evolutionary arms race between pathogen and target host. The present review describes the entomopathogenic potential of Chytridiomycota and Blastocladiomycota fungi, and two groups of fungal allies: Oomycota and Microsporidia. The Oomycota (water moulds) are considered as a model biological control agent of mosquito larvae. Due to their shared ecological and morphological similarities, they had long been considered a part of the fungal kingdom; however, phylogenetic studies have since placed this group within the Straminipila. The Microsporidia are parasites of economically-important insects, including grasshoppers, lady beetles, bumblebees, colorado potato beetles and honeybees. They have been found to display some fungal characteristics, and phylogenetic studies suggest that they are related to fungi, either as a basal branch or sister group. The Blastocladiomycota and Chytridiomycota, named the lower fungi, historically were described together; however, molecular phylogenetic and ultrastructural research has classified them in their own phylum. They are considered parasites of ants, and of the larval stages of black flies, mosquitoes and scale insects.

Description of Tottonophyes enigmatica gen. nov., sp. nov. (Hydrozoa, Siphonophora, Calycophorae), with a reappraisal of the function and homology of nectophoral canals

Zootaxa ◽  
2018 ◽  
Vol 4415 (3) ◽  
pp. 452 ◽  
Author(s):  
P. R. PUGH ◽  
C.W. DUNN ◽  
S.H.D. HADDOCK
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Sister Group ◽  
The Other ◽  
Phylogenetic Position ◽  
Unique Combination ◽  
New Family ◽  
Molecular Phylogenetic ◽  
Distinct Morphology ◽  
A New Species

A new species of calycophoran siphonophore, Tottonophyes enigmatica gen. nov, sp. nov., is described. It has a unique combination of traits, some shared with prayomorphs (including two rounded nectophores) and some with clausophyid diphyomorphs (the nectophores are dissimilar, with one slightly larger and slightly to the anterior of the other, and both possess a somatocyst). Molecular phylogenetic analyses indicate that the new species is the sister group to all other diphyomorphs. A new family, Tottonophyidae, is established for it. Its phylogenetic position and distinct morphology help clarify diphyomorph evolution. The function and homology of the nectophoral canals and somatocyst is also re-examined and further clarification is given to their nomenclature.

Morphological variation and systematics of Dipsas catesbyi (Sentzen, 1796) and Dipsas pavonina Schlegel, 1837 (Serpentes: Dipsadinae)

Zootaxa ◽  
2009 ◽  
Vol 2203 (1) ◽  
pp. 31-48 ◽  
Author(s):  
ANA CAROLINE DE LIMA ◽  
ANA LÚCIA DA COSTA PRUDENTE
Keyword(s):  
South America ◽  
Geographic Variation ◽  
Geographic Distribution ◽  
Morphological Variation ◽  
Color Pattern ◽  
High Variability ◽  
The Other ◽  
Morphological Similarity ◽  
Morphometric Characters ◽  
Morphological Studies

The genus Dipsas includes approximately 32 species, distributed from Mexico to South America (Brazil, Argentina, Paraguay, Bolivia and Peru). High variability in color pattern and scalation has made it difficult to define limits among Dipsas species and to interpret patterns of geographic variation. We analyzed 14 meristic and 18 morphometric characters of 483 specimens of D. catesbyi and 129 specimens of D. pavonina, as well as their color pattern, coloration, hemipenis, cephalic glands and geographic distribution. We describe variation in meristic and morphometric characters and incorporate new characters into revised diagnoses. The results indicate a greater morphological similarity between D. catesbyi and species of Sibynomorphus than with the other species of Dipsas. More morphological studies should be done to evaluate current phylogenetic proposals for relationships within the tribe Dipsadini.

New and known species of the genus Pungentus Thorne & Swanger, 1936 (Dorylaimida, Nordiidae) from Iran

2019 ◽  
Vol 94 ◽  
Author(s):  
F. Heydari ◽  
F. Gharibzadeh ◽  
E. Pourjam ◽  
M. Pedram
Keyword(s):  
Molecular Data ◽  
The Body ◽  
Rhizospheric Soil ◽  
Female Reproductive System ◽  
Phylogenetic Relations ◽  
Morphological Studies ◽  
Phylogenetic Studies ◽  
Molecular Phylogenetic ◽  
Morphological And Molecular Data ◽  
System Body

Abstract This contribution provides morphological and molecular data for one new and one known species of the genus Pungentus. The first species, P. azarbaijanensis n. sp., was recovered from the rhizospheric soil of grasses, collected in West Azarbaijan province, Iran, and was characterized by 2082–2365 μm long females having an angular lip region separated from the rest of the body by a constriction, 33–35 μm long odontostyle, vulva at 43.5–51.0%, 27.0–29.5 μm long rounded-conoid tail, and males unknown. It was compared morphologically with five species: P. angulosus, P. crassus, P. marietani, P. parapungens and P. pungens, which have didelphic-amphidelphic female reproductive system, body longer than 1.5 mm, and odontostyle longer than 20 μm. The second species, P. engadinensis, was recovered in three different regions of Iran (Mazandaran, Semnan and East Azarbaijan provinces). It was compared morphologically with some other populations reported all over the world. Besides morphological studies, molecular phylogenetic studies using partial sequences of 28S rDNA D2-D3 fragments were performed, and the phylogenetic relations of the two Iranian populations with other species and genera were discussed.

Transfer of four species of Cryptantha to the genus Johnstonella (Boraginaceae)

Phytotaxa ◽  
2019 ◽  
Vol 425 (5) ◽  
pp. 279-289
Author(s):  
MICHAEL G. SIMPSON ◽  
MAKENZIE E. MABRY ◽  
KRISTEN HASENSTAB-LEHMAN
Keyword(s):  
Sequence Data ◽  
Strong Support ◽  
Herbaceous Plant ◽  
New Combinations ◽  
Morphological Similarity ◽  
Additional Species ◽  
Phylogenetic Studies ◽  
The Family ◽  
Molecular Phylogenetic ◽  
Close Relatives

Based on a previous molecular phylogenetic analysis, Cryptantha, an herbaceous plant genus of the family Boraginaceae, subtribe Amsinckiinae, was split into five genera: Eremocarya, Greeneocharis, Johnstonella, Oreocarya, and a reduced Cryptantha, the last in two separate clades. As a result of this study, Johnstonella was expanded to 13 species and 15 minimum-rank taxa, these formerly classified in Cryptantha s.l. More recent analyses of this complex, with an increased sample size and high-throughput sequence data, indicate that four additional Cryptantha species not previously sampled—C. albida, C. mexicana, C. texana—plus what was originally identified as C. hispida nest within Johnstonella with strong support. However, the identity of C. hispida used in this analysis is now in doubt. The material used likely represents a new species, in the process of being investigated. Two additional species not sequenced to date—C. geohintonii and C. gypsites—are clearly close relatives of C. albida and C. mexicana, based on morphological similarity. In order to maintain monophyly of genera, we here make new combinations in transferring four of these species from Cryptantha to Johnstonella, with the new combinations Johnstonella albida, J. geohintonii, J. gypsites, and J. mexicana. We delay the transfer of Cryptantha texana to Johnstonella because of its morphological similarity to other species that clearly nest within Cryptantha s.s. These same molecular phylogenetic studies may also support the transfer of two previously recognized Johnstonella species—J. echinosepala and J. micromeres—to Cryptantha, one to each of two separate clades. Additional phylogenetic studies focusing on some of these taxa are needed to confirm the position of these latter three species and the possible recognition of a new genus in the complex.

scholarly journals Museomics: Phylogenomics of the Moth Family Epicopeiidae (Lepidoptera) Using Target Enrichment

2021 ◽  
Vol 5 (2) ◽  
Author(s):  
Elsa Call ◽  
Christoph Mayer ◽  
Victoria Twort ◽  
Lars Dietz ◽  
Niklas Wahlberg ◽  
...  
Keyword(s):  
Strong Support ◽  
Sister Group ◽  
Molecular Data ◽  
Museum Specimens ◽  
Target Enrichment ◽  
History Museum ◽  
Phylogenetic Studies ◽  
A Genome ◽  
Molecular Phylogenetic ◽  
Genomic Studies

Abstract Billions of specimens can be found in natural history museum collections around the world, holding potential molecular secrets to be unveiled. Among them are intriguing specimens of rare families of moths that, while represented in morphology-based works, are only beginning to be included in genomic studies: Pseudobistonidae, Sematuridae, and Epicopeiidae. These three families are part of the superfamily Geometroidea, which has recently been defined based on molecular data. Here we chose to focus on these three moth families to explore the suitability of a genome reduction method, target enrichment (TE), on museum specimens. Through this method, we investigated the phylogenetic relationships of these families of Lepidoptera, in particular the family Epicopeiidae. We successfully sequenced 25 samples, collected between 1892 and 2001. We use 378 nuclear genes to reconstruct a phylogenetic hypothesis from the maximum likelihood analysis of a total of 36 different species, including 19 available transcriptomes. The hypothesis that Sematuridae is the sister group of Epicopeiidae + Pseudobistonidae had strong support. This study thus adds to the growing body of work, demonstrating that museum specimens can successfully contribute to molecular phylogenetic studies.

scholarly journals The Phalangopsidae crickets (Orthoptera, Grylloidea) of the Seychelles Archipelago: Taxonomy of an ecological radiation

Zootaxa ◽  
2021 ◽  
Vol 5047 (3) ◽  
pp. 201-246
Author(s):  
SYLVAIN HUGEL ◽  
BEN H. WARREN ◽  
LAURE DESUTTER-GRANDCOLAS
Keyword(s):  
New Species ◽  
Type Species ◽  
Morphological Characters ◽  
The Other ◽  
Phylogenetic Studies ◽  
Extensive Field ◽  
Molecular Phylogenetic ◽  
Ecological Radiation ◽  
The One ◽  
First Time

The Phalangopsidae crickets (Grylloidea) of the Seychelles are examined following extensive field sampling on several main islands of the archipelago (Mahé, Silhouette, Praslin, La Digue). Despite the small area of these islands, six genera (12 species) are documented, including one new genus and five new species. The type species of the genus Seychellesia Bolivar, 1912 is transferred to the genus Paragryllodes Karny, 1909 as Paragryllodes nitidula (Bolivar, 1912) n. comb. The other species described in Seychellesia are transferred to the genus Seselia Hugel & Desutter-Grandcolas, n. gen., as Seselia longicercata (Bolivar, 1912) n. comb. and Seselia patellifera (Bolivar, 1912) n. comb. Two new species are also described in the genus Seselia Hugel & Desutter-Grandcolas, n. gen., Seselia coccofessei Hugel & Desutter-Grandcolas, n. gen., n. sp. (type species of the genus) and Seselia matyoti Hugel & Desutter-Grandcolas, n. gen., n. sp. The genera Phaeogryllus Bolivar, 1912 and Phalangacris Bolivar, 1895 are redescribed, including Phalangacris ferlegro Hugel & Desutter-Grandcolas, n. sp. and Phalangacris sotsote Hugel & Desutter-Grandcolas, n. sp. that are new to science. The genus Gryllapterus Bolivar, 1912 is redescribed and transferred from the Landrevinae (Gryllidae) to the Cachoplistinae (Phalangopsidae). New tribes are defined for the genus Paragryllodes (Paragryllodini Hugel & Desutter-Grandcolas, n. tribe) on the one hand, and for Seselia Hugel & Desutter-Grandcolas, n. gen., Phalangacris, Phaeogryllus and Gryllapterus (Seselini Hugel & Desutter-Grandcolas, n. tribe) on the other, using morphological characters and the results of molecular phylogenetic studies (Warren et al. 2019). Phaloria (Papuloria) insularis (Bolivar, 1912) (Phaloriinae) is redescribed and restricted to Mahé, and its calling song is documented for the first time, while Phaloria (Papuloria) bolivari Hugel & Desutter-Grandcolas, n. sp. is newly described from Silhouette. Identification keys are proposed for the genera of Seselini Hugel & Desutter-Grandcolas, n. tribe, and for the species of Seselia Hugel & Desutter-Grandcolas, n. gen. and Phalangacris. The confusion between the Mogoplistidae Ornebius succineus Bolivar, 1912 and the Phalangopsidae Heterotrypus succineus Bolivar, 1910 is discussed, and the name Subtiloria succineus (Bolivar, 1912) considered a nomen nudum.  

scholarly journals Combining the small South American genus Androtrichum into Cyperus (Cyperaceae)

2020 ◽  
Vol 153 (3) ◽  
pp. 446-454
Author(s):  
Luciana Pereira-Silva ◽  
Rafael Trevisan ◽  
Ana Claudia Rodrigues ◽  
Isabel Larridon
Keyword(s):  
The Other ◽  
Distribution Data ◽  
South American ◽  
Kranz Anatomy ◽  
Phylogenetic Studies ◽  
Code Of Nomenclature ◽  
The Family ◽  
Molecular Phylogenetic ◽  
Taxonomic Changes ◽  
Complex Relationships

Background and aims – Molecular phylogenetic studies have provided a clearer understanding of the complex relationships within the family Cyperaceae. These studies have consistently shown that 12 allied genera are nested in the genus Cyperus. However, early Sanger sequencing-based phylogenies that included the two species of the small South American genus Androtrichum were inconclusive in placing this genus either as sister to Cyperus or as part of its early divergent lineages. A recent phylogenetic analysis however conclusively placed the two species of Androtrichum within the C3 Cyperus Grade. In this study, we investigate if the morphology and anatomy of Androtrichum species provide additional evidence for their placement in the genus Cyperus. In addition, we provide descriptions and distribution data for the species.Material and methods – Herbarium material from FLOR, FURB, GENT, ICN, and K has been studied. Samples of the culm and leaf were studied using histological methods. Taxonomic changes and typifications of names were performed according to the International Code of Nomenclature for algae, fungi, and plants. Key results – The morphology and the non-Kranz anatomy observed in the Androtrichum species confirm their placement among the other C3  Cyperus species. Androtrichum is combined into Cyperus. For one species, a combination in Cyperus is already available: Cyperus trigynus. For the other species, a new name in Cyperus is published: Cyperus byssaceus. Two typifications are established and morphological descriptions and distribution data are provided. Conclusion – By integrating recent molecular phylogenetic data with additional evidence from morphology and anatomy, Androtrichum is combined into Cyperus. As a result of this taxonomic change, a single monophyletic genus Cyperus is now recognised in the Cyperus Clade of tribe Cypereae.

Nymphaeaceae: a basal angiosperm family (ANITA grade) with a fully developed embryo

2007 ◽  
Vol 17 (4) ◽  
pp. 293-296 ◽  
Author(s):  
Carol C. Baskin ◽  
Jerry M. Baskin
Keyword(s):  
The Other ◽  
Basal Angiosperm ◽  
Seed Length ◽  
Basal Angiosperms ◽  
Phylogenetic Studies ◽  
Seed Maturity ◽  
Other Hand ◽  
Molecular Phylogenetic ◽  
Radicle Emergence ◽  
Embryo Length

AbstractRudimentary, broad and small linear embryos occur among members of the most primitive (basal) extant angiosperms, collectively called the ANITA grade (i.e.Amborella,NymphaealesandAustrobaileyales).Amborella(rudimentary) andAustrobaileyales(rudimentary inAustrobaileyaceae,IlliciaceaeandSchisandraceaeand small linear inTrimeniaceae) have kinds of embryos that are known to be underdeveloped; consequently, they must grow inside the seed prior to radicle emergence (germination). On the other hand, it is not known if broad embryos need to grow before radicles can emerge, and whether they are underdeveloped or fully developed. Thus, we addressed the question: ‘Is the broad embryo ofNymphaealesalso underdeveloped?’. Although the embryo length : seed length ratios inNymphaeaAlbert Greenburg,N.capensisvar.zanzibariensisandN.immutabiliswere 0.311, 0.349 and 0.234, respectively, embryos did not grow prior to radicle emergence. Thus, they are fully developed at seed maturity. IfAmborellaandNymphaealesare equally the most basal angiosperms, as some molecular phylogenetic studies indicate, then we must conclude that the broad and rudimentary embryos are equally primitive.

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