scholarly journals Raman microspectroscopy: sub-cellular chemical imaging of aging

Aging ◽  
2021 ◽  
Author(s):  
Lisa Liendl ◽  
Markus Schosserer
Keyword(s):  
Chemical Imaging ◽  
Raman Microspectroscopy

scholarly journals Raman and AFM-IR chemical imaging of stratum corneum model membranes

2020 ◽  
Vol 98 (9) ◽  
pp. 495-501
Author(s):  
Adrian Paz Ramos ◽  
Gert Gooris ◽  
Joke Bouwstra ◽  
Michael Molinari ◽  
Michel Lafleur
Keyword(s):  
Fatty Acids ◽  
Stratum Corneum ◽  
Free Fatty Acids ◽  
Percutaneous Absorption ◽  
Lipid Fraction ◽  
Chemical Imaging ◽  
Raman Microspectroscopy ◽  
Central Layer ◽  
Lipid Matrix ◽  
Lipid Environment

Stratum corneum (SC), the outermost layer of the epidermis, is the primary barrier to percutaneous absorption. The diffusion of substances through the skin occurs through the SC lipid fraction, which is essentially constituted of an equimolar mixture of ceramides, free fatty acids, and cholesterol. The lipid constituents of SC are mainly forming continuous multilamellar membranes in the solid/crystalline state. However, recent findings suggest the presence of a highly disordered (liquid) phase formed by the unsaturated C18 chain of ceramide EOS, surrounded by a highly ordered lipid environment. The aim of the present work was to study the lipid spatial distribution of model SC membranes composed of ceramide EOS, ceramide NS, a mixture of free fatty acids, and cholesterol, using Raman microspectroscopy and AFM-IR spectroscopy techniques. The enhanced spatial resolution at the tens of nanometers scale of the AFM-IR technique revealed that the lipid matrix is overall homogeneous, with the presence of small, slightly enriched, and depleted regions in a lipid component. No liquid domains of ceramide EOS were observed at this scale, a result that is consistent with the model proposing that the oleate nanodrops are concentrated in the central layer of the three-layer organization of the SC membranes forming the long periodicity phase. In addition, both Raman microspectroscopy and AFM-IR techniques confirmed the fluid nature of the unsaturated chain of ceramide EOS while the rest of the lipid matrix was found highly ordered.

Chemical Imaging of Xylem by Raman Microspectroscopy

2017 ◽  
pp. 133-178 ◽  
Author(s):  
András Gorzsás
Keyword(s):  
Chemical Imaging ◽  
Raman Microspectroscopy

Polarization measurements in raman microspectroscopy.

1989 ◽  
Vol 86 ◽  
pp. 1245-1251 ◽  
Author(s):  
Claude Bremard ◽  
Jacky Laureyns ◽  
George Turrell
Keyword(s):  
Raman Microspectroscopy ◽  
Polarization Measurements

Generalized Heterodyne Configurations for Photo-induced Force Microscopy

2019 ◽  
Author(s):  
Le Wang ◽  
Devon Jakob ◽  
Haomin Wang ◽  
Alexis Apostolos ◽  
Marcos M. Pires ◽  
...  
Keyword(s):  
Spatial Resolution ◽  
Repetition Rate ◽  
Modulation Frequency ◽  
High Harmonic ◽  
Chemical Imaging ◽  
Heterodyne Detection ◽  
Force Microscopy ◽  
Wide Range ◽  
The Difference ◽  
Afm Cantilever

<div>Infrared chemical microscopy through mechanical probing of light-matter interactions by atomic force microscopy (AFM) bypasses the diffraction limit. One increasingly popular technique is photo-induced force microscopy (PiFM), which utilizes the mechanical heterodyne signal detection between cantilever mechanical resonant oscillations and the photo induced force from light-matter interaction. So far, photo induced force microscopy has been operated in only one heterodyne configuration. In this article, we generalize heterodyne configurations of photoinduced force microscopy by introducing two new schemes: harmonic heterodyne detection and sequential heterodyne detection. In harmonic heterodyne detection, the laser repetition rate matches integer fractions of the difference between the two mechanical resonant modes of the AFM cantilever. The high harmonic of the beating from the photothermal expansion mixes with the AFM cantilever oscillation to provide PiFM signal. In sequential heterodyne detection, the combination of the repetition rate of laser pulses and polarization modulation frequency matches the difference between two AFM mechanical modes, leading to detectable PiFM signals. These two generalized heterodyne configurations for photo induced force microscopy deliver new avenues for chemical imaging and broadband spectroscopy at ~10 nm spatial resolution. They are suitable for a wide range of heterogeneous materials across various disciplines: from structured polymer film, polaritonic boron nitride materials, to isolated bacterial peptidoglycan cell walls. The generalized heterodyne configurations introduce flexibility for the implementation of PiFM and related tapping mode AFM-IR, and provide possibilities for additional modulation channel in PiFM for targeted signal extraction with nanoscale spatial resolution.</div>

Subnanometer Spatial Resolution Chemical Imaging

2018 ◽  
Author(s):  
Paul S. Weiss
Keyword(s):  
Spatial Resolution ◽  
Chemical Imaging

scholarly journals Time lapse synchrotron IR chemical imaging for observing the acclimation of a single algal cell to CO2 treatment

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Ghazal Azarfar ◽  
Ebrahim Aboualizadeh ◽  
Simona Ratti ◽  
Camilla Olivieri ◽  
Alessandra Norici ◽  
...  
Keyword(s):  
Algal Cell ◽  
Principal Component ◽  
External Perturbation ◽  
Time Lapse ◽  
Chemical Imaging ◽  
Hyperspectral Data ◽  
Aqueous Environment ◽  
Ir Absorption ◽  
Imaging Data ◽  
Mid Infrared

AbstractAlgae are the main primary producers in aquatic environments and therefore of fundamental importance for the global ecosystem. Mid-infrared (IR) microspectroscopy is a non-invasive tool that allows in principle studying chemical composition on a single-cell level. For a long time, however, mid-infrared (IR) imaging of living algal cells in an aqueous environment has been a challenge due to the strong IR absorption of water. In this study, we employed multi-beam synchrotron radiation to measure time-resolved IR hyperspectral images of individual Thalassiosira weissflogii cells in water in the course of acclimation to an abrupt change of CO2 availability (from 390 to 5000 ppm and vice versa) over 75 min. We used a previously developed algorithm to correct sinusoidal interference fringes from IR hyperspectral imaging data. After preprocessing and fringe correction of the hyperspectral data, principal component analysis (PCA) was performed to assess the spatial distribution of organic pools within the algal cells. Through the analysis of 200,000 spectra, we were able to identify compositional modifications associated with CO2 treatment. PCA revealed changes in the carbohydrate pool (1200–950 cm$$^{-1}$$ - 1 ), lipids (1740, 2852, 2922 cm$$^{-1}$$ - 1 ), and nucleic acid (1160 and 1201 cm$$^{-1}$$ - 1 ) as the major response of exposure to elevated CO2 concentrations. Our results show a local metabolism response to this external perturbation.

EXPRESS: Design Considerations for Discrete Frequency Infrared Microscopy Systems

2021 ◽  
pp. 000370282110133
Author(s):  
Rohit Bhargava ◽  
Yamuna Dilip Phal ◽  
Kevin Yeh
Keyword(s):  
Imaging System ◽  
Chemical Imaging ◽  
Optical Component ◽  
Imaging Systems ◽  
Imaging Data ◽  
Discrete Frequency ◽  
Figures Of Merit ◽  
Design Considerations ◽  
Hardware Implementations ◽  
Measurement Capabilities

Discrete frequency infrared (DFIR) chemical imaging is transforming the practice of microspectroscopy by enabling a diversity of instrumentation and new measurement capabilities. While a variety of hardware implementations have been realized, considerations in the design of all-IR microscopes have not yet been compiled. Here we describe the evolution of IR microscopes, provide rationales for design choices, and the major considerations for each optical component that together comprise an imaging system. We analyze design choices in illustrative examples that use these components to optimize performance, under their particular constraints. We then summarize a framework to assess the factors that determine an instrument’s performance mathematically. Finally, we summarize the design and analysis approach by enumerating performance figures of merit for spectroscopic imaging data that can be used to evaluate the capabilities of imaging systems or suitability for specific intended applications. Together, the presented concepts and examples should aid in understanding available instrument configurations, while guiding innovations in design of the next generation of IR chemical imaging spectrometers.

scholarly journals Effective processing and evaluation of chemical imaging data with respect to morphological features of the zebrafish embryo

2021 ◽  
Author(s):  
Katharina Halbach ◽  
Timothy Holbrook ◽  
Thorsten Reemtsma ◽  
Stephan Wagner
Keyword(s):  
Inductively Coupled Plasma ◽  
Zebrafish Embryo ◽  
Statistical Significance ◽  
Software Tool ◽  
Chemical Imaging ◽  
Imaging Data ◽  
Inductively Coupled ◽  
Spatially Resolved ◽  
Icp Ms ◽  
Plasma Mass Spectrometry

AbstractA workflow was developed and implemented in a software tool for the automated combination of spatially resolved laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) data and data on the morphology of the biological tissue. Making use of a recently published biological annotation software, FishImager automatically assigns the biological feature as regions of interest (ROIs) and overlays them with the quantitative LA-ICP-MS data. Furthermore, statistical tools including cluster algorithms can be applied to the elemental intensity data and directly compared with the ROIs. This is effectively visualized in heatmaps. This allows gaining statistical significance on distribution and co-localization patterns. Finally, the biological functions of the assigned ROIs can then be easily linked with elemental distributions. We demonstrate the versatility of FishImager with quantitative LA-ICP-MS data of the zebrafish embryo tissue. The distribution of natural elements and xenobiotics is analyzed and discussed. With the help of FishImager, it was possible to identify compartments affected by toxicity effects or biological mechanisms to eliminate the xenobiotic. The presented workflow can be used for clinical and ecotoxicological testing, for example. Ultimately, it is a tool to simplify and reproduce interpretations of imaging LA-ICP-MS data in many applications. Graphical abstract

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