scholarly journals Assessing the Use of Sentinel-2 Time Series for Monitoring Cork Oak Decline in Portugal

Author(s):  
Ana Navarro ◽  
João Catalão ◽  
João Calvão

In Portugal, cork oak (Quercus suber L.) stands cover 737 Mha, being the most predominant species of the montado agroforestry system, contributing for the economic, social and environmental development of the country. Cork oak decline is a known problem since the late years of the 19th century that has recently worsen. The causes of oak decline seem to be a result of slow and cumulative processes, although the role of each environmental factor is not yet established. The availability of Sentinel-2 high spatial and temporal resolution dense time series enables gradual processes monitoring. These processes can be monitored using spectral vegetation indices (VI) once their temporal dynamics are expected to be related with green biomass and photosynthetic efficiency. The Normalized Difference Vegetation Index (NDVI) is sensitive to structural canopy changes, however it tends to saturate at moderate-to-dense canopies. Modified VI have been proposed to incorporate the reflectance in the red-edge spectral region, which is highly sensitive to chlorophyll content while largely unaffected by structural properties. In this research, in-situ data on the location and vitality status of cork oak trees are used to assess the correlation between chlorophyll indices (CI) and NDVI time series trends and cork oak vitality at the tree level. Preliminary results seem to be promising since differences between healthy and unhealthy (diseased/dead) trees were observed.

2019 ◽  
Vol 11 (21) ◽  
pp. 2515 ◽  
Author(s):  
Ana Navarro ◽  
Joao Catalao ◽  
Joao Calvao

In Portugal, cork oak (Quercus suber L.) stands cover 737 Mha, being the most predominant species of the montado agroforestry system, contributing to the economic, social and environmental development of the country. Cork oak decline is a known problem since the late years of the 19th century that has recently worsened. The causes of oak decline seem to be a result of slow and cumulative processes, although the role of each environmental factor is not yet established. The availability of Sentinel-2 high spatial and temporal resolution dense time series enables monitoring of gradual processes. These processes can be monitored using spectral vegetation indices (VI) as their temporal dynamics are expected to be related with green biomass and photosynthetic efficiency. The Normalized Difference Vegetation Index (NDVI) is sensitive to structural canopy changes, however it tends to saturate at moderate-to-dense canopies. Modified VI have been proposed to incorporate the reflectance in the red-edge spectral region, which is highly sensitive to chlorophyll content while largely unaffected by structural properties. In this research, in situ data on the location and vitality status of cork oak trees are used to assess the correlation between chlorophyll indices (CI) and NDVI time series trends and cork oak vitality at the tree level. Preliminary results seem to be promising since differences between healthy and unhealthy (diseased/dead) trees were observed.


2020 ◽  
Vol 12 (4) ◽  
pp. 600 ◽  
Author(s):  
Pedro J. Gómez-Giráldez ◽  
María J. Pérez-Palazón ◽  
María J. Polo ◽  
María P. González-Dugo

Annual grasslands are an essential component of oak savanna ecosystems as the primary source of fodder for livestock and wildlife. Drought resistance adaptation has led them to complete their life cycle before serious soil and plant water deficits develop, resulting in a close link between grass phenology and soil water dynamics. In this work, these links were explored using a combination of terrestrial photography, satellite imagery and hydrological ground measurements. We obtained key phenological parameters of the grass cycle from terrestrial camera data using the Green Chromatic Coordinate (GCCc) index. These parameters were compared with those provided by time-series of vegetation indices (VI) obtained from Sentinel-2 (S2) satellites and time-series of abiotic variables, which defined the hydrology of the system. The results showed that the phenological parameters estimated by the S2 Normalized Difference Vegetation Index (NDVI) (r = 0.83, p < 0.001) and soil moisture (SM) (r = 0.75, p < 0.001) presented the best agreement with ground-derived observations compared to those provided by other vegetation indices and abiotic variables. The study of NDVI and SM dynamics, that was extended over four growing seasons (July 2015–May 2019), showed that the seasonality of both variables was highly synchronized, with the best agreements at the beginning and at the end of the dry seasons. However, stage changes were estimated first by SM, followed by NDVI, with a delay of between 3 and 10 days. These results support the use of a multi-approach method to monitor the phenology and the influence of the soil moisture dynamic under the study conditions.


Agronomy ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 1486
Author(s):  
Chris Cavalaris ◽  
Sofia Megoudi ◽  
Maria Maxouri ◽  
Konstantinos Anatolitis ◽  
Marios Sifakis ◽  
...  

In this study, a modelling approach for the estimation/prediction of wheat yield based on Sentinel-2 data is presented. Model development was accomplished through a two-step process: firstly, the capacity of Sentinel-2 vegetation indices (VIs) to follow plant ecophysiological parameters was established through measurements in a pilot field and secondly, the results of the first step were extended/evaluated in 31 fields, during two growing periods, to increase the applicability range and robustness of the models. Modelling results were examined against yield data collected by a combine harvester equipped with a yield-monitoring system. Normalized Difference Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI) were examined as plant signals and combined with Normalized Difference Water Index (NDWI) and/or Normalized Multiband Drought Index (NMDI) during the growth period or before sowing, as water and soil signals, respectively. The best performing model involved the EVI integral for the 20 April–31 May period as a plant signal and NMDI on 29 April and before sowing as water and soil signals, respectively (R2 = 0.629, RMSE = 538). However, model versions with a single date and maximum seasonal VIs values as a plant signal, performed almost equally well. Since the maximum seasonal VIs values occurred during the last ten days of April, these model versions are suitable for yield prediction.


2018 ◽  
Vol 7 (10) ◽  
pp. 405 ◽  
Author(s):  
Urška Kanjir ◽  
Nataša Đurić ◽  
Tatjana Veljanovski

The European Common Agricultural Policy (CAP) post-2020 timeframe reform will reshape the agriculture land use control procedures from a selected risk fields-based approach into an all-inclusive one. The reform fosters the use of Sentinel data with the objective of enabling greater transparency and comparability of CAP results in different Member States. In this paper, we investigate the analysis of a time series approach using Sentinel-2 images and the suitability of the BFAST (Breaks for Additive Season and Trend) Monitor method to detect changes that correspond to land use anomaly observations in the assessment of agricultural parcel management activities. We focus on identifying certain signs of ineligible (inconsistent) use in permanent meadows and crop fields in one growing season, and in particular those that can be associated with time-defined greenness (vegetation vigor). Depending on the requirements of the BFAST Monitor method and currently time-limited Sentinel-2 dataset for the reliable anomaly study, we introduce customized procedures to support and verify the BFAST Monitor anomaly detection results using the analysis of NDVI (Normalized Difference Vegetation Index) object-based temporal profiles and time-series standard deviation output, where geographical objects of interest are parcels of particular land use. The validation of land use candidate anomalies in view of land use ineligibilities was performed with the information on declared land annual use and field controls, as obtained in the framework of subsidy granting in Slovenia. The results confirm that the proposed combined approach proves efficient to deal with short time series and yields high accuracy rates in monitoring agricultural parcel greenness. As such it can already be introduced to help the process of agricultural land use control within certain CAP activities in the preparation and adaptation phase.


2020 ◽  
Vol 12 (14) ◽  
pp. 2195 ◽  
Author(s):  
Blanka Vajsová ◽  
Dominique Fasbender ◽  
Csaba Wirnhardt ◽  
Slavko Lemajic ◽  
Wim Devos

The availability of large amounts of Sentinel-2 data has been a trigger for its increasing exploitation in various types of applications. It is, therefore, of importance to understand the limits above which these data still guarantee a meaningful outcome. This paper proposes a new method to quantify and specify restrictions of the Sentinel-2 imagery in the context of checks by monitoring, a newly introduced control approach within the European Common Agriculture Policy framework. The method consists of a comparison of normalized difference vegetation index (NDVI) time series constructed from data of different spatial resolution to estimate the performance and limits of the coarser one. Using similarity assessment of Sentinel-2 (10 m pixel size) and PlanetScope (3 m pixel size) NDVI time series, it was estimated that for 10% out of 867 fields less than 0.5 ha in size, Sentinel-2 data did not provide reliable evidence of the activity or state of the agriculture field over a given timeframe. Statistical analysis revealed that the number of clean or full pixels and the proportion of pixels lost after an application of a 5-m (1/2 pixel) negative buffer are the geospatial parameters of the field that have the highest influence on the ability of the Sentinel-2 data to qualify the field’s state in time. We specified the following limiting criteria: at least 8 full pixels inside a border and less than 60% of pixels lost. It was concluded that compliance with the criteria still assures a high level of extracted information reliability. Our research proved the promising potential, which was higher than anticipated, of Sentinel-2 data for the continuous state assessment of small fields. The method could be applied to other sensors and indicators.


2020 ◽  
Vol 12 (21) ◽  
pp. 3524
Author(s):  
Feng Gao ◽  
Martha C. Anderson ◽  
W. Dean Hively

Cover crops are planted during the off-season to protect the soil and improve watershed management. The ability to map cover crop termination dates over agricultural landscapes is essential for quantifying conservation practice implementation, and enabling estimation of biomass accumulation during the active cover period. Remote sensing detection of end-of-season (termination) for cover crops has been limited by the lack of high spatial and temporal resolution observations and methods. In this paper, a new within-season termination (WIST) algorithm was developed to map cover crop termination dates using the Vegetation and Environment monitoring New Micro Satellite (VENµS) imagery (5 m, 2 days revisit). The WIST algorithm first detects the downward trend (senescent period) in the Normalized Difference Vegetation Index (NDVI) time-series and then refines the estimate to the two dates with the most rapid rate of decrease in NDVI during the senescent period. The WIST algorithm was assessed using farm operation records for experimental fields at the Beltsville Agricultural Research Center (BARC). The crop termination dates extracted from VENµS and Sentinel-2 time-series in 2019 and 2020 were compared to the recorded termination operation dates. The results show that the termination dates detected from the VENµS time-series (aggregated to 10 m) agree with the recorded harvest dates with a mean absolute difference of 2 days and uncertainty of 4 days. The operational Sentinel-2 time-series (10 m, 4–5 days revisit) also detected termination dates at BARC but had 7% missing and 10% false detections due to less frequent temporal observations. Near-real-time simulation using the VENµS time-series shows that the average lag times of termination detection are about 4 days for VENµS and 8 days for Sentinel-2, not including satellite data latency. The study demonstrates the potential for operational mapping of cover crop termination using high temporal and spatial resolution remote sensing data.


2020 ◽  
Vol 12 (24) ◽  
pp. 4144
Author(s):  
José Luis Gallardo-Salazar ◽  
Marín Pompa-García

Modern forestry poses new challenges that space technologies can solve thanks to the advent of unmanned aerial vehicles (UAVs). This study proposes a methodology to extract tree-level characteristics using UAVs in a spatially distributed area of pine trees on a regular basis. Analysis included different vegetation indices estimated with a high-resolution orthomosaic. Statistically reliable results were found through a three-phase workflow consisting of image acquisition, canopy analysis, and validation with field measurements. Of the 117 trees in the field, 112 (95%) were detected by the algorithm, while height, area, and crown diameter were underestimated by 1.78 m, 7.58 m2, and 1.21 m, respectively. Individual tree attributes obtained from the UAV, such as total height (H) and the crown diameter (CD), made it possible to generate good allometric equations to infer the basal diameter (BD) and diameter at breast height (DBH), with R2 of 0.76 and 0.79, respectively. Multispectral indices were useful as tree vigor parameters, although the normalized-difference vegetation index (NDVI) was highlighted as the best proxy to monitor the phytosanitary condition of the orchard. Spatial variation in individual tree productivity suggests the differential management of ramets. The consistency of the results allows for its application in the field, including the complementation of spectral information that can be generated; the increase in accuracy and efficiency poses a path to modern inventories. However, the limitation for its application in forests of more complex structures is identified; therefore, further research is recommended.


Sensors ◽  
2020 ◽  
Vol 20 (19) ◽  
pp. 5551
Author(s):  
Chao Sun ◽  
Jialin Li ◽  
Luodan Cao ◽  
Yongchao Liu ◽  
Song Jin ◽  
...  

The successful launch of the Sentinel-2 constellation satellite, along with advanced cloud detection algorithms, has enabled the generation of continuous time series at high spatial and temporal resolutions, which is in turn expected to enable the classification of salt marsh vegetation over larger spatiotemporal scales. This study presents a critical comparison of vegetation index (VI) and curve fitting methods—two key factors for time series construction that potentially influence vegetation classification performance. To accomplish this objective, the stability of five different VI time series, namely Normalized Difference Vegetation Index (NDVI), Soil-Adjusted Vegetation Index (SAVI), Enhanced Vegetation Index (EVI), Green Normalized Difference Vegetation Index (GNDVI), and Water-Adjusted Vegetation Index (WAVI), was compared empirically; the suitability between three curve fitting methods, namely Asymmetric Gaussian (AG), Double Logistic (DL), and Two-term Fourier (TF), and VI time series was measured using the coefficient of determination, and the salt marsh vegetation separability among different combinations of VI time series and curve fitting methods (i.e., VI time series-based curve fitting model) was quantified using overall the Jeffries–Matusita distance. Six common types of salt marsh vegetation from three typical coastal sites in China were used to validate these findings, which demonstrate: (1) the SAVI performed best in terms of time series stability, while the EVI exhibited relatively poor time series stability with conspicuous outliers induced by the sensitivity to omitted clouds and shadows; (2) the DL method commonly resulted in the most accurate classification of different salt marsh vegetation types, especially when combined with the EVI time series, followed by the TF method; and (3) the SAVI/NDVI-based DL/TF model demonstrated comparable efficiency for classifying salt marsh vegetation. Notably, the SAVI/NDVI-based DL model performed most strongly for high latitude regions with a continental climate, whilst the SAVI/NDVI-based TF model appears to be better suited to mid- to low latitude regions dominated by a monsoonal climate.


2020 ◽  
Vol 12 (17) ◽  
pp. 2708 ◽  
Author(s):  
Qi Wang ◽  
Jiancheng Li ◽  
Taoyong Jin ◽  
Xin Chang ◽  
Yongchao Zhu ◽  
...  

Soil moisture is an important variable in ecological, hydrological, and meteorological studies. An effective method for improving the accuracy of soil moisture retrieval is the mutual supplementation of multi-source data. The sensor configuration and band settings of different optical sensors lead to differences in band reflectivity in the inter-data, further resulting in the differences between vegetation indices. The combination of synthetic aperture radar (SAR) data with multi-source optical data has been widely used for soil moisture retrieval. However, the influence of vegetation indices derived from different sources of optical data on retrieval accuracy has not been comparatively analyzed thus far. Therefore, the suitability of vegetation parameters derived from different sources of optical data for accurate soil moisture retrieval requires further investigation. In this study, vegetation indices derived from GF-1, Landsat-8, and Sentinel-2 were compared. Based on Sentinel-1 SAR and three optical data, combined with the water cloud model (WCM) and the advanced integral equation model (AIEM), the accuracy of soil moisture retrieval was investigated. The results indicate that, Sentinel-2 data were more sensitive to vegetation characteristics and had a stronger capability for vegetation signal detection. The ranking of normalized difference vegetation index (NDVI) values from the three sensors was as follows: the largest was in Sentinel-2, followed by Landsat-8, and the value of GF-1 was the smallest. The normalized difference water index (NDWI) value of Landsat-8 was larger than that of Sentinel-2. With reference to the relative components in the WCM model, the contribution of vegetation scattering exceeded that of soil scattering within a vegetation index range of approximately 0.55–0.6 in NDVI-based models and all ranges in NDWI1-based models. The threshold value of NDWI2 for calculating vegetation water content (VWC) was approximately an NDVI value of 0.4–0.55. In the soil moisture retrieval, Sentinel-2 data achieved higher accuracy than data from the other sources and thus was more suitable for the study for combination with SAR in soil moisture retrieval. Furthermore, compared with NDVI, higher accuracy of soil moisture could be retrieved by using NDWI1 (R2 = 0.623, RMSE = 4.73%). This study provides a reference for the selection of optical data for combination with SAR in soil moisture retrieval.


Author(s):  
Ankita P. Kamble ◽  
A. A. Atre ◽  
Payal A. Mahadule ◽  
C. B. Pande ◽  
N. S. Kute ◽  
...  

Pests and diseases cause major harm during crop development. Also plant stress affects crop quality and quantity. Recent developments in high resolution remotely sensed data has seen a great potential in mapping cropland areas infected by pests and diseases, as well as potential vulnerable areas over expansive areas. Crop health monitoring in this study was carried out using remote sensing techniques. The present study was carried out in MPKV, Rahuri, Ahmednagar District, Maharashtra. Vegetation indices like Normalized Difference Vegetation Index (NDVI) and Soil Adjusted Vegetation Index (SAVI) were used to classify the crops into healthy and dead or unhealthy one. Sentinel-2 image data from October 2019 to January 2020 processed in Arc GIS 10.1 were used for this study. Vegetation is a key component of the ecosystem and plays an important role in stabilizing the global environment. The result showed that the average vegetation cover was decreased in the month of November and healthy vegetation was found more in month of October as compared to December and January. This shows that NDVI and SAVI indices for Sentinel-2 images can be used for crop health monitoring.


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