scholarly journals Shockwave-induced DNA-free genome editing in tobacco: targeting the actin depolymerizing factor gene increases drought and salinity tolerance

2020 ◽  
Author(s):  
Sruthy Maria Augustine ◽  
Anoop Vadakan Cherian ◽  
Kerstin Seiling ◽  
Stefano Di Fiore ◽  
Nicole Raven ◽  
...  

Abstract DNA-free genome editing involves the direct introduction of ribonucleoprotein (RNP) complexes into cells, but this strategy has rarely been successful in plants. Here we describe a new technique for the introduction of RNPs into plant cells involving the generation of cavitation bubbles using a pulsed laser. The resulting shockwave achieves the efficient transfection of walled cells in tissue explants by the creation of transient membrane pores. RNP-containing cells were rapidly identified by fluorescence microscopy, followed by regeneration and the screening of mutant plants by high-resolution melt analysis. We used this technique in tobacco to target the endogenous phytoene desaturase (pds) and actin depolymerizing factor (adf) genes. Genome-edited plants were produced with an efficiency of 5.6–8.7%. We also evaluated the effects of adf mutations in T2 mutant plants under drought and salinity stress, showing that adf acts as a key regulator of osmotic stress tolerance in plants.

2021 ◽  
Author(s):  
Sruthy Maria Augustine ◽  
Anoop Vadakan Cherian ◽  
Kerstin Seiling ◽  
Stefano Di Fiore ◽  
Nicole Raven ◽  
...  

Abstract DNA-free genome editing involves the direct introduction of ribonucleoprotein (RNP) complexes into cells, but this strategy has rarely been successful in plants. In the present study, we describe a new technique for the introduction of RNPs into plant cells involving the generation of cavitation bubbles using a pulsed laser. The resulting shockwave achieves the efficient transfection of walled cells in tissue explants by creating transient membrane pores. RNP-containing cells were rapidly identified by fluorescence microscopy, followed by regeneration and the screening of mutant plants by high-resolution melt analysis. We used this technique in Nicotiana tabacum to target the endogenous PHYTOENE DESATURASE (PDS) and ACTIN DEPOLYMERIZING FACTOR (ADF) genes. Genome-edited plants were produced with an efficiency of 35.2% for PDS and 16.5% for ADF. Further we evaluated the physiological, cellular and molecular effects of ADF mutations in T2 mutant plants under drought and salinity stress. The results suggest that ADF acts as a key regulator of osmotic stress tolerance in plants.


2013 ◽  
Vol 14 (8) ◽  
pp. 913-922 ◽  
Author(s):  
Greyson P Twist ◽  
Roger Gaedigk ◽  
J Steven Leeder ◽  
Andrea Gaedigk

Botany ◽  
2021 ◽  
Author(s):  
Erin Jacqueline Gilchrist ◽  
Daniela Hegebarth ◽  
Shumin Wang ◽  
Teagen D. Quilichini ◽  
Jason Sawler ◽  
...  

We report the identification of two SNPs in Cannabis sativa that are associated with female and male plant sex phenotypes, and are located on the top arm of the X chromosome. High Resolution Melt analysis was used to develop and validate a novel, rapid method for sex identification in medical/recreational cannabis as well as in hemp. This method can distinguish between dioecious male (XY) and dioecious female (XX) cannabis plants with 100% accuracy, and can also be used to differentiate between male and female Humulus lupulus (hop) plants.


2013 ◽  
pp. 409-422 ◽  
Author(s):  
Einar Berg ◽  
Tania Nolan

Plant Disease ◽  
2017 ◽  
Vol 101 (8) ◽  
pp. 1449-1454 ◽  
Author(s):  
Brian W. Bahder ◽  
Ericka E. Helmick ◽  
Nigel A. Harrison

Lethal yellowing (LY) and Texas Phoenix palm decline (TPPD) are two important phytoplasma diseases of palms in Florida. Both have been responsible for major economic losses historically and remain a constant threat to the sustainability of palm production in the landscaping and nursery industries in Florida. These two diseases cause rapid, lethal decline in afflicted palms, so rapid detection and identification is crucial to implement appropriate management strategies to reduce further spread and losses. In this study, a qPCR assay was developed to detect and identify the causal agents of LY and TPPD. Based on sequence data of the 16S gene for the 16SrIV-A phytoplasma (LY) and the 16SrIV-D phytoplasma (TPPD), two regions were identified in the gene that possessed sufficient variation to yield amplicons with measurable differences in melting temperature based on high resolution melt analysis (HRMA). One region was in the 5′ region and the other was located in the 3′ region of the gene. Products from both regions yielded amplicons with significantly different melting temperatures between the two phytoplasma strains. This research allows for the detection and identification of phytoplasmas in palms rapidly by eliminating many lengthy and post-PCR steps commonly used in phytoplasma identification.


2001 ◽  
Vol 1 (5-6) ◽  
pp. 393-402 ◽  
Author(s):  
J.Q.J.C. Verbeck ◽  
G.I.M. Worm ◽  
H. Futselaar ◽  
J.C. van Dijk

Dead-end ultrafiltration has proven itself as a technique for reclamation of backwash water of sand filters and as a pre-treatment step for spiral wound reverse osmosis. A direct result of dead-end filtration is a decreased flux caused by the accumulation of material in the membrane pores and on the membrane surface. Different cleaning techniques are used to remove this accumulated material. Recently a new technique has been introduced, the AirFlush. This technique makes use of air to create higher turbulence as compared to a water flush. At Delft University of Technology research has started into the fundamentals of the combined air- and water-flush. First a series of experiments has been carried out to determine the different flow patterns, followed by experiments to determine which air- and water-velocities give the best cleaning. Finally head loss experiments have been done to get information about the energy dissipated in the system. The results of the head loss experiments have been compared to the theoretical head loss calculated with the theory of heterogeneous two-phase flow.


Transfusion ◽  
2020 ◽  
Vol 60 (11) ◽  
pp. 2702-2713
Author(s):  
Tomoya Hayashi ◽  
Ryota Aminaka ◽  
Hiroyuki Ishii ◽  
Yoshihiko Tani ◽  
Yoshihiro Fujimura ◽  
...  

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