scholarly journals ESTIMATES OF HERITABILITY, REPEATABILITY AND BREEDING VALUE OF SOME PERFORMANCE TRAITS OF HOLSTEIN COWS IN EGYPT USING REPEATABILITY ANIMAL MODEL

2016 ◽  
Vol 53 (3) ◽  
pp. 147-152
Keyword(s):  
Animal Model ◽  
Breeding Value ◽  
Holstein Cows ◽  
Performance Traits

EFFICIENCY AND COMPARISON OF THE TEST-DAY MODEL AND BLUP METHOD MODIFICATIONS FOR ASSESSING BULLS BREEDING VALUE IN SIMMENTAL CATTLE BREED

2020 ◽  
Author(s):  
А.И. МАМОНТОВА ◽  
С.А. НИКИТИН ◽  
Е.Е. МЕЛЬНИКОВА ◽  
А.А. СЕРМЯГИН
Keyword(s):  
Animal Model ◽  
Milk Yield ◽  
Cattle Breed ◽  
Breeding Value ◽  
Am1 Method ◽  
Production Traits ◽  
Genetic Trend ◽  
Sire Model ◽  
The Russian Federation ◽  
Simmental Cattle

Целью проведенных исследований являлась отработка и адаптация применения методик BLUP AM (Animal Model — модель животного) и TDM (Test-Day Model — модель тестового дня) для прогнозирования племенной ценности быков-производителей и оценки селекционно-генетических параметров на популяции скота симментальской породы четырех регионов РФ. Проведен сравнительный анализ указанных методов с более ранним методом BLUP SM (Sire Model — модель отца). Рассчитана племенная ценность быков и коров симментальской породы по признакам молочной продуктивности: удой за 305 дней, выход молочного жира, выход молочного белка. Анализ полученных средних значений достоверности оценок быков-производителей, рассчитанных на основе сопоставляемых методов, свидетельствует, что достоверность для признака «удой за 305 дней» при переходе от метода SM1 к AM1 увеличивается на 2,4%, а при переходе от SM1 к TDM1 — на 7,8%. Даны варианты генетического тренда по удою с использованием различных уравнений моделей расчета племенной ценности. На основании полученных данных можно сделать вывод о том, что модель тестового дня позволяет не только повысить точность оценок быков, но и более рельефно выявить их ранги, а также несколько уменьшить срок получения достоверных оценок производителей по качеству потомства по продуктивным признакам. The purpose of this research was to develop and adapt the application of BLUP AM (Animal Model) and TDM (Test-Day Model) methods for predicting the sires breeding value and evaluating genetic parameters for Simmental cattle population in four regions of the Russian Federation. A comparative analysis of these methods with the earlier BLUP SM (Sire Model) method is performed. The breeding value for sires and cows of Simmental breed was calculated by milk production traits: milk yield for 305 days; milk fatyield; milk proteinyield. The sires reliability of average breeding value calculated by different methods reveal that milk yield for 305 days when switching from the SM1 to AM1 method increases by 2.4%, and when switching from SM1 to TDM1 — by 7.8%.The variants of the genetic trend for milk yield are given using various equations of BLUP and TDM. Based on the obtained data, it can be concluded that the Test-Day model allows increasing the accuracy of bull’s evaluation and also more clearly identifying their ranks, as well as slightly reducing the time for obtaining reliable estimates of bulls by offspring for production traits.

Genetic analysis of docility score of Australian Angus and Limousin cattle

2018 ◽  
Vol 58 (2) ◽  
pp. 213 ◽  
Author(s):  
S. F. Walkom ◽  
M. G. Jeyaruban ◽  
B. Tier ◽  
D. J. Johnston
Keyword(s):  
Adverse Effect ◽  
Animal Model ◽  
Genetic Analysis ◽  
Genetic Parameters ◽  
Genetic Correlations ◽  
Production Costs ◽  
Breeding Value ◽  
Maternal Behaviour ◽  
Production Traits ◽  
Subjective Score

The temperament of cattle is believed to affect the profitability of the herd through impacting production costs, meat quality, reproduction, maternal behaviour and the welfare of the animals and their handlers. As part of the national beef cattle genetic evaluation in Australia by BREEDPLAN, 50 935 Angus and 50 930 Limousin calves were scored by seedstock producers for temperament using docility score. Docility score is a subjective score of the animal’s response to being restrained and isolated within a crush, at weaning, and is scored on a scale from 1 to 5 with 1 representing the quiet and 5 the extremely nervous or anxious calves. Genetic parameters for docility score were estimated using a threshold animal model with four thresholds (five categories) from a Bayesian analysis carried out using Gibbs sampling in THRGIBBS1F90 with post-Gibbs analysis in POSTGIBBSF90. The heritability of docility score on the observed scale was 0.21 and 0.39 in Angus and Limousin, respectively. Since the release of the docility breeding value to the Australian Limousin population there has been a favourable trend within the national herd towards more docile cattle. Weak but favourable genetic correlations between docility score and the production traits indicates that docility score is largely independent of these traits and that selection to improve temperament can occur without having an adverse effect on growth, fat, muscle and reproduction.

scholarly journals Simulation Study on the Integration of Health Traits in Horse Breeding Programs

Animals ◽  
2020 ◽  
Vol 10 (7) ◽  
pp. 1153
Author(s):  
Lisa Büttgen ◽  
Johannes Geibel ◽  
Henner Simianer ◽  
Torsten Pook
Keyword(s):  
Osteochondrosis Dissecans ◽  
Selection Index ◽  
R Package ◽  
Breeding Value ◽  
Index Selection ◽  
Threshold Selection ◽  
Horse Breeding ◽  
Frequency Of Use ◽  
Performance Traits ◽  
And Performance

Osteochondrosis dissecans (OCD) is a degenerative disease of the cartilage leading to osseous fragments in the joints. It is important in horse breeding both from an animal welfare and an economic perspective. To study adequate breeding strategies to reduce OCD prevalence, a lifelike simulation of the breeding program of German Warmblood horses was performed with the R package MoBPS. We simulated complex breeding schemes of riding horses with different selection steps and realistic age structure, mimicking the German situation. As an example, osseous fragments in fetlock and hock joints were considered. Different scenarios, either using threshold selection, index selection or genomic index selection, respectively, were compared regarding their impact on health and performance traits. A rigorous threshold selection as well as the integration of OCD in a selection index at the stage of stallion licensing and chosen frequency of use in breeding cases on a selection index that includes breeding values for OCD traits performed best on a comparable level. Simply integrating OCD in this breeding value was less effective in terms of OCD reduction. Scenarios with a higher reduction of OCD also showed a slightly reduced improvement in the riding horse performance traits.

Sire evaluation using animal model versus differentconventional methods in red sindhi cattle

2016 ◽  
Author(s):  
P. K. Mallick ◽  
A. K. Ghosh ◽  
A. S. Rajendiran
Keyword(s):  
Animal Model ◽  
Genetic Gain ◽  
Simplex Method ◽  
Animal Husbandry ◽  
Breeding Value ◽  
Sire Evaluation ◽  
Improvement Programme ◽  
Breed Improvement ◽  
Model Versus ◽  
Selection Of

The effectiveness of sire evaluation is the backbone of any breed improvement programme as much as 61% of genetic gain in dairy cattle results from selection of sires through “bulls to breed cows” and “bulls to breed bulls” path. The application of latest and simplex method of sire evaluation like BLUPF90 in Indian breeds is scanty. The present investigation was planned to evaluate the Red Sindhi sires by this method and to compare the effectiveness of BLUPF90 method with other conventional methods of sire evaluation in Red Sindhi cattle. The records of production and reproduction performances of first lactation traits of 717 Red Sindhi cows, progeny of 58 sires, spread over a period of 40 years (1966-2005) from CCBF, Chiplima, Orissa under the control of Department of Animal Husbandry, Dairying and Fisheries, Ministry of Agriculture, Government of India and CBF, Kalsi, Deheradun, Uttarakhand were analyzed. The present study was single and multi-trait evaluation of breeding values of Red Sindhi sires. The overall least squares population mean for first lactation milk yield (FLMY) was 1536.35±54.87 kg. The average breeding value of sires of single trait from different methods ranged from 1536.35 kg (LSM, DFREML and BLUPF90-Dairy Pack) to 1588.50 kg (simple daughter average) but in multi-trait method the breeding value does not vary with each other. The comparison of different method of sire evaluation based on single trait for FLMY only shows that the DFREML model for single trait should be preferred over the BLUP, LSM and simple daughter average methods for evaluating the sire breeding value. However, if a sire-breeding value is to be computed from multi traits then BLUPF90 model may be preferred over DFREML model.

Results of multivariate individual animal model genetic evaluations of british pedigree beef cattle

1997 ◽  
Vol 65 (2) ◽  
pp. 199-207 ◽  
Author(s):  
R. E. Crumps ◽  
G. Simm ◽  
D. Nicholson ◽  
R. H. Findlay ◽  
J. G. E. Bryan ◽  
...  
Keyword(s):  
Animal Model ◽  
Birth Weight ◽  
Beef Cattle ◽  
Fixed Effects ◽  
Breeding Value ◽  
Individual Animal ◽  
Group Sex ◽  
The Uk ◽  
Genetic Evaluations ◽  
Genetic Trends

AbstractThis paper reports the procedures put into place in the UK for the genetic evaluation of pedigree beef cattle and estimation of genetic trends using a comprehensive model to allow critical analysis of progress made under previous data recording schemes. Live weights of Simmental, Limousin, Charolais, South Devon and Aberdeen Angus beef cattle, recorded by the Meat and Livestock Commission (MLC) from 1970 to 1992 were analysed, as part of a project to introduce best linear unbiased predictions (BLUP) of breeding value in the British beef industry. Birth weights were available from MLC or the relevant breed society, (4000 to 84000 records, depending on the breed) and 200- and 400-day weights were estimated by within-animal linear regression on all available weights (resulting in 8000 to 48000 records per breed). Animals were retrospectively assigned to contemporary groups within herds, separately for each trait, taking account of observed calving patterns. Records were adjusted to correct for heterogeneity of variance between herds. BLUP evaluations were then performed within breed, fitting a multivariate individual animal model. In addition to additive direct genetic effects, additive maternal genetic and dam permanent environmental effects were included for birth weight and 200-day weight. Unknown parents were assigned to genetic groups, based on estimated date of birth. The model included fixed effects for contemporary group, sex, month of birth, birth type (single or multiple), embryo transfer births, fostered calves, breed of dam, proportion purebred and age of dam. Genetic trends were estimated by regressing estimated breeding values for animals on their year of birth. Trends in birth weight, 200-day weight and 400-day weight between 1970 and 1992 were approximately 0·09, 0·73 and 1·38 kg per annum respectively for the Charolais breed; 0·08, 0·76 and 1·33 kg per annum for the Simmental; 0·06, 0·53 and 0·89 kg per annum for the Limousin; 0·12, 1·02 and 1·86 kg per annum for the Aberdeen Angus; and 0·03, 0·38 and 0·82 kg per annum for the South Devon breed.

Repeatability and bias of estimated breeding values for dairy bulls and bull dams calculated from animal model evaluations

1993 ◽  
Vol 57 (2) ◽  
pp. 175-182 ◽  
Author(s):  
P. Uimari ◽  
E. A. Mäntysaari
Keyword(s):  
Animal Model ◽  
Dairy Cow ◽  
Relative Weight ◽  
Breeding Value ◽  
Potential Bias ◽  
Data Set ◽  
Breeding Values ◽  
Dairy Bulls ◽  
Estimated Breeding Values ◽  
Genetic Standard Deviation

AbstractAn animal model and an approximative method for calculating repeatabilities of estimated breeding values are used in Finnish dairy cow evaluation. Changes in estimated breeding values over time as daughters accumulate were studied. Special emphasis was given to the accuracy and potential bias in the pedigree indices of young sires. The data set used was the same as in the national evaluation and the traits investigated were protein yield and somatic cell count. The average repeatability in evaluation of bulls without daughters was 0·37. The empirical repeatability defined as a squared correlation between the pedigree index and the final sire proof was only 0·15. The reduction in the repeatability was attributed to the selection on pedigree index. The upward bias observed in pedigree indices was 5 kg (approx. 0·3 of genetic standard deviation). The bias was caused by the overestimation of bull dams' breeding value. Also the proofs of bull sires increased after the second crop of daughters. The correlation between the evaluations of the same sire calculated from two separate equal size daughter groups was 0·91 when the bull had 10 to 50 daughters and 0·87 with over 100 daughters. This illustrates how the relative weight of the pedigree decreases while more progeny information is accumulated in the evaluation.

scholarly journals Association between body and udder morphological traits and dairy performance in Spanish Assaf sheep

2013 ◽  
Vol 56 (1) ◽  
pp. 430-442 ◽  
Author(s):  
M. Ángeles Pérez-Cabal ◽  
E. Legaz ◽  
I. Cervantes ◽  
L. F. de la Fuente ◽  
R. Martínez ◽  
...  
Keyword(s):  
Milk Yield ◽  
Live Weight ◽  
Breeding Value ◽  
Cell Counts ◽  
Dairy Traits ◽  
Performance Traits ◽  
Fixed Model ◽  
Genetic Evaluations ◽  
Daily Milk Yield ◽  
The Relationship

Abstract. The relationship between 17 body and 8 udder measurements and phenotypic dairy performance were studied using information from 280 Spanish Assaf ewes from 2 to 4 years old belonging to 18 flocks. The influence of the environmental area on the dairy traits was assessed by fitting a fixed model including the flock effect and the age effect. A factor analysis was also carried out to determine the lowest number of independent factors that account for most of the variation in the traits. The flock was statistically significant for performance trait and predicted breeding value (PBV) while the age was only significant in 150 days standardized milk yield (MY150) and daily milk yield (DMY). In general, not much association was found between morphological and dairy performance traits. Few body traits showed significant phenotypic correlations; mainly those related to height, diameters, ears and tail, with the latter being the most correlated but unfavourable for DMY and PBV. Among udder conformation, udder depth and length were the most correlated traits to milk production, while deep udders and short teats were related to lower somatic cell counts. The different traits were classified for analyses into six factors relating mainly to: live weight; production and udder traits; cheese production; stature; teats and udder health; and udder dimensions. Trade of animals was concluded to be unreasonably based on morphological or even on performance traits. The participation of breeders in an appropriate breeding scheme based on accurate genetic evaluations is encouraged.

scholarly journals Restricted Selection Index to Relieve the Negative Repercussion in Reproductive Performance of Holstein Cows

2021 ◽  
Vol 10 (3) ◽  
pp. 202-207
Keyword(s):  
Repeated Measures ◽  
Selection Index ◽  
Reproductive Traits ◽  
Breeding Value ◽  
Holstein Cows ◽  
Sources Of Information ◽  
True Breeding ◽  
Productive Traits ◽  
Restricted Selection ◽  
True Breeding Value

The aim of this investigation was to develop restricted selection index aiming to improve 305-day yields of milk (MY), fat (FY) and protein (PY), while keeping the deterioration in days open (DO), calving interval (CI) and number of services per conception (NSPC) at minimum levels in Holstein cows. The data represent 3682 records of 1122 cows, daughters of 95 sires and 712 dams. The data were analyzed by multi-trait animal model with repeated measures. Eight selection indexes (five unrestricted and three restricted) were derived using MY, FY, PY, CI, DO and NSPC in various combinations as sources of information in the indexes. However, the true breeding value included MY, FY and PY. The highest accuracy of selection (0.60) resulted from selection based on the full index. Milk yield and SPC appeared to be the most valuable traits in the full index. Combining the two traits into one index (the best reduced index) gave 0.57 accuracy of selection. The index based on MY alone (the most accurate single trait index) gave 0.53 accuracy. It seems possible to reduce the expected genetic deterioration in the reproductive traits by restricting the full index to result in zero genetic change in NSPC (rTI=0.48). This restriction will allow the breeder to mitigate the deterioration in DO and CI by 12 and 16 days respectively, by sacrificing with part of the expected genetic improvement in productive traits (29, 40 and 48% in MY, FY and PY, respectively).

scholarly journals Immunogenetic status and breeding value of Holstein cows

2021 ◽  
Vol 262 ◽  
pp. 02012
Author(s):  
Vladimir Kaishev ◽  
Anzor Zhilyaev ◽  
Tamirlan Kudaev ◽  
Madina Tleinsheva ◽  
Ibragim Taov
Keyword(s):  
Blood Group ◽  
Specific Weight ◽  
Breeding Value ◽  
Holstein Cows ◽  
Blood Group System ◽  
Experimental Animals ◽  
Group System ◽  
Study Results ◽  
The Usa ◽  
Selection Parameters

In the genealogical structure of the breeding stock, the highest specific weight is occupied by the Reflection Sovering and Vis bek Aydiala lines, accounting for 56.8 and 39.9% of animals, respectively. The study results of Holstein cattle blood-group factors can be used to monitor its gene pool, genetic intrabreed differentiation, assess selection parameters, and conduct targeted selection of parental pairs. It was determined that in EAA blood group system in Holstein cows of reproduction from the USA, the frequency of A1 antigen is 58.7%, and in domestic reproduction animals, this antigen is found with a lower frequency of 50.7%. At the same time, in the specified system of blood groups in both groups of experimental animals, antigen “a” is characterized by the highest frequency, the lowest occurrence is A2 antigen, and animals with A1 antigen took an intermediate position. In EAB system, the US Holstein cows have a higher frequency of such antigens as Е3/, О3 и I1 compared to the reproductive animals of Agro-Soyuz LLC. The EAF blood group system is represented by two antigens, where F antigen frequency in both groups of experimental animals is 100%. Of all the blood group systems, the greatest differences between compared groups of animals were detected for the antigens of EAZ blood group system.

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