Changes in the Regional Population Structure and Their Political Impact in Japan

2019 ◽  
Vol 24 (3) ◽  
pp. 113-134
Author(s):  
Hyun-chool Lee
1994 ◽  
Vol 51 (6) ◽  
pp. 1430-1442 ◽  
Author(s):  
Eric B. Taylor ◽  
Terry D. Beacham ◽  
Masahide Kaeriyama

We examined geographic variability in minisatellite DNA in chum salmon (Oncorhynchus keta) from 42 populations from the North Pacific Ocean to (1) determine the extent of regional population structure at minisatellite loci and (2) assess the ability of minisatellite variability to determine the geographic origin in individual chum salmon. Restriction fragments from 1.6 to 13.6 kilobase pairs in molecular weight were resolved with a minisatellite probe. The fragments were inherited from parent to offspring and appeared to represent segregation at two linked loci. Minisateliite DNA variability was negligible between annual samples from the same rivers, and chum salmon fell into three regional population groupings: (i) Japanese, (ii) Russian/Yukon River, and (iii) southeastern Alaska/British Columbia salmon. These regional groupings probably reflect historical patterns of postglacial dispersal of chum salmon from three distinct refugia in the North Pacific. We used restriction fragment counts as input to linear discriminant and neural network classification of independent test samples of salmon. Accuracies of 90–95, 81–86, and 72–80% were achieved when classifying fish as of either Japan/Russia/Yukon River versus southeastern Alaska/British Columbia origin, Japan versus Russia/Yukon River origin, or Russia versus Yukon River origin, respectively.


Oryx ◽  
2016 ◽  
Vol 51 (3) ◽  
pp. 506-512 ◽  
Author(s):  
Jean Philippe Puyravaud ◽  
Priya Davidar ◽  
Rajeev K. Srivastava ◽  
Belinda Wright

AbstractA ratio-based logistic model developed to assess elephant harvest rates, based on a study at Nagarhole Tiger Reserve in India, was recommended as a management tool to control human–elephant conflict through culling. Considering this reserve among others violates an assumption of the logistic model: isolation. Nevertheless, assuming this violation was irrelevant, we re-evaluated the model, with minor modifications, for the neighbouring Mudumalai Tiger Reserve, where we used data from 13 elephant Elephas maximus population surveys to derive bootstrapped sets of population ratios, and mortality records. We generated arrays of harvest regimes and examined which ratio outputs were closest to the bootstrapped ratios. Our results indicated that (1) model outputs corresponded best with the Mudumalai population structure when harvest regimes were extreme and unlikely, (2) there were significant differences in population structure and harvest regimes between Nagarhole and Mudumalai, and (3) only 49% of adult male deaths predicted by model outputs were recorded in official governmental records. The model provides significantly different results among reserves, which invalidates it as a tool to predict change across the entire elephant population. Variability in survey data and inaccuracies in transition probabilities are sufficiently large to warrant caution when using them as a basis for deterministic modelling. Official mortality databases provide a weak means of validation because poaching incidents are poorly recorded. We conclude that the model should be based on validated transition probabilities and encompass the entire regional population.


2007 ◽  
Vol 274 (1618) ◽  
pp. 1611-1616 ◽  
Author(s):  
Courtney Nichols ◽  
Jerry Herman ◽  
Oscar E Gaggiotti ◽  
Keith M Dobney ◽  
Kim Parsons ◽  
...  

A number of dolphin species, though highly mobile, show genetic structure among parapatric and sometimes sympatric populations. However, little is known about the temporal patterns of population structure for these species. Here, we apply Bayesian inference and data from ancient DNA to assess the structure and dynamics of bottlenose dolphin ( Tursiops truncatus ) populations in the coastal waters of the UK. We show that regional population structure in UK waters is consistent with earlier studies suggesting local habitat dependence for this species in the Mediterranean Sea and North Atlantic. One genetically differentiated UK population went extinct at least 100 years ago and has not been replaced. The data indicate that this was a local extinction, and not a case of historical range shift or contraction. One possible interpretation is a declining metapopulation and conservation need for this species in the UK.


2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Ana Neves ◽  
Ana Rita Vieira ◽  
Vera Sequeira ◽  
Rafaela Barros Paiva ◽  
Leonel Serrano Gordo ◽  
...  

2018 ◽  
Vol 19 (5) ◽  
pp. 1039-1053 ◽  
Author(s):  
Anthony J. Geneva ◽  
Andrea M. Kreit ◽  
Shane Neiffer ◽  
Susan Tsang ◽  
Richard J. Horwitz

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