scholarly journals ESPECTROSCOPIA COMPUTACIONAL APLICADA AO REASSINALAMENTO ESTRUTURAL DE MOLÉCULAS QUIRAIS: HELIANNUOL L

Author(s):  
Jordana T. Brito ◽  
Lucas H. Martorano ◽  
Ana Carolina F. de Albuquerque ◽  
Carlos Magno Rocha Ribeiro ◽  
Rodolfo Goetze Fiorot ◽  
...  

In the past, structure determination of natural products was an arduous process depending almost entirely on chemical synthesis, mainly by derivatization and degradation processes, taking years of effort. Recently, structural elucidation of natural products has undergone a revolution. Nowadays, with the combined use of different advanced spectroscopic methods, it became possible to completely assign the structure of natural products using small amounts of sample. However, despite the extraordinary ongoing advances in spectroscopy, the mischaracterization of natural products has been and remains a recurrent problem, especially in the presence of several chiral centers. The misinterpretation of NMR data has resulted in frequent reports addressing the issue of structural reassignment. In this context, a great effort has been devoted to the development of quantum chemical calculations to predict NMR parameters, and thus achieve a more accurate spectral interpretation. In this work, we applied a protocol for theoretical calculations of 1H NMR chemical shifts in order to establish the correct and unequivocal structure of Helianuol L, a member of the Heliannuol’s class, isolated from Helianthus annus. These secondary metabolites present a broad spectrum of biological activities, including the allelochemical activity, making them promising candidates as natural agrochemicals. It is worth mentioning, however, that the process of elucidating the structure of Heliannuol L was based on structural correlations with molecules already known in the literature, where few stereochemical analyses were performed. In this way, based on the fact that other compounds of the Heliannuol’s class had their structure previously reassigned, the verification of the proposed structure of Heliannuol L becomes of great importance.

Molecules ◽  
2021 ◽  
Vol 26 (2) ◽  
pp. 249
Author(s):  
Raquel G. Soengas ◽  
Humberto Rodríguez-Solla

The 1,3-butadiene motif is widely found in many natural products and drug candidates with relevant biological activities. Moreover, dienes are important targets for synthetic chemists, due to their ability to give access to a wide range of functional group transformations, including a broad range of C-C bond-forming processes. Therefore, the stereoselective preparation of dienes have attracted much attention over the past decades, and the search for new synthetic protocols continues unabated. The aim of this review is to give an overview of the diverse methodologies that have emerged in the last decade, with a focus on the synthetic processes that meet the requirements of efficiency and sustainability of modern organic chemistry.


2013 ◽  
Vol 2013 ◽  
pp. 1-12 ◽  
Author(s):  
Amita Verma ◽  
Sunil Joshi ◽  
Deepika Singh

Imidazoles have occupied a unique position in heterocyclic chemistry, and its derivatives have attracted considerable interests in recent years for their versatile properties in chemistry and pharmacology. Imidazole is nitrogen-containing heterocyclic ring which possesses biological and pharmaceutical importance. Thus, imidazole compounds have been an interesting source for researchers for more than a century. The imidazole ring is a constituent of several important natural products, including purine, histamine, histidine, and nucleic acid. Being a polar and ionisable aromatic compound, it improves pharmacokinetic characteristics of lead molecules and thus is used as a remedy to optimize solubility and bioavailability parameters of proposed poorly soluble lead molecules. There are several methods used for the synthesis of imidazole-containing compounds, and also their various structure reactions offer enormous scope in the field of medicinal chemistry. The imidazole derivatives possess extensive spectrum of biological activities such as antibacterial, anticancer, antitubercular, antifungal, analgesic, and anti-HIV activities. This paper aims to review the biological activities of imidazole during the past years.


2020 ◽  
Author(s):  
Ana Carolina Ferreira de Albuquerque ◽  
José Walkimar de Mesquita Carneiro ◽  
Fernando Martins dos Santos Junior

The properties of natural products, including their biological and pharmacological activities, are directly correlated with their chemical structures. Thus, a correct structural characterization of these compounds is a crucial step to the understanding of their biological activities. However, despite the recent advances in spectroscopic techniques, structural studies of natural products can be challenging. This way, theoretical calculations of Nuclear Magnetic Resonance (NMR) parameters (such as chemical shifts and coupling constants) have proven to be a powerful and low-cost tool for the aid to experimental techniques traditionally used for the structural characterization of natural products. One of the several applications of quantum-mechanical calculations of NMR parameters is the study of tautomerism. Since chemical shifts are sensitive to the tautomeric equilibrium, this technique can provide crucial informations. In this work, it was applied a protocol for theoretical calculations of ¹³C chemical shifts in order to study the tautomerism of the natural product 7-epi-clusianone, isolated from Rheedia gardneriana. This protocol consists in a Monte Carlo conformational search, followed by geometry optimization and shielding tensors calculations, both using a density functional level of theory. After comparison of theoretical and experimental data, it was possible to confirm the two tautomers present in equilibrium in the experimental solution. Furthermore, this study highlights how this theoretical protocol can be an effective method in identifying the preferred tautomeric form in solution.


2013 ◽  
Vol 8 (7) ◽  
pp. 1934578X1300800
Author(s):  
Abdelatif ElMarrouni ◽  
Amandine Kolleth ◽  
Raphael Lebeuf ◽  
Julian Gebauer ◽  
Sébastien Prevost ◽  
...  

Lyngbouilloside and the related macrolides lyngbyaloside lyngbyaloside B and lyngbyaloside C have attracted a lot of attention over the past decade due to their intriguing architecture their natural scarcity and their potential biological activities. This review aims to showcase the various strategies that have been used to access these natural products.


2008 ◽  
Vol 2008 (27) ◽  
pp. 4640-4646 ◽  
Author(s):  
Shamil Latypov ◽  
Alsu Balandina ◽  
Marco Boccalini ◽  
Alessandra Matteucci ◽  
Konstantin Usachev ◽  
...  

Synlett ◽  
2019 ◽  
Vol 30 (18) ◽  
pp. 2041-2050
Author(s):  
Yan Xiao ◽  
Song Sun ◽  
Jin-Tao Yu ◽  
Jiang Cheng

Thiadiazole moieties are present in many natural products and pharmaceutical compounds that possess a broad spectrum of biological activities, serving as antidepressant, anxiolytic, antimicrobial, antitubercular, antiinflammatory, antidiabetic, anticancer, antihypertensive, or antifungal drugs. Many excellent methods have been reported for accessing such frameworks. In this review, we summarize advances made within the past ten years in the synthesis of various types of thiadiazole.1 Introduction2 Synthesis of Thiadiazoles2.1 Synthesis of 1,2,3-Thiadiazoles2.1.1 Synthesis of 1,2,3-Thiadiazoles from Diazo/Azide Compounds2.1.2 Synthesis of 1,2,3-Thiadiazoles from Sulfonyl Hydrazines or N-Tosylhydrazones2.2 Synthesis of 1,2,4-Thiadiazoles2.2.1 Synthesis of 1,2,4-Thiadiazoles from Thioamides or their Derivatives2.2.2 Synthesis of 1,2,4-Thiadiazoles from Amidines or 2-Aminopyridines2.3 Synthesis of 1,3,4-Thiadiazoles2.4 Synthesis of 1,2,5-Thiadiazoles3 Conclusion


Author(s):  
SUDIP KUMAR MANDAL ◽  
SUBHOJIT DAWN ◽  
ANINDYA BOSE

New anti-ulcer substances are still vitally necessary for the people of countries such as India and South Africa to avoid high cost of the most prescribed marketed anti-ulcer drugs (proton-pump inhibitors). New candidate against gastric ulcer is also necessary to avoid the potential problem (enterochromaffin-like cell hyperplasia may be induced) associated with the long-term use of synthetic proton-pump inhibitors. However, the search for the novel entity against ulceration is challenging because of the complexity of the ulcer process and its role in host defense to infections. Nature is the source of remedies for the humankind. Among the different biological activities of the natural products that have been published till date, anti-ulcer is one of the most reported effects. Some single natural products such as curcumin, 1-hydroxy-3,7,8-trimethoxyxanthone, cinnamic acid, thymol, epoxycarvone, and menthol; single synthetic products such as, 4,6-diaryl-3, 4-dihydropyrimidin-2(1H)-thiones, 1,4-dihydropyrimidine derivatives, and dihydropyrimidinone and piperidine hybrids; plant products such as Aloe vera, Mangifera indica, Zingiber officinale, Azadirachta indica, Psidium guava, Carica papaya, Panax ginseng, Terminalia chebula, Ocimum sanctum, Daucus carota, and Mimosa pudica, Alpinia galangal; nutraceuticals such as garlic, cauliflower, banana, honey, cucumber, and cod liver oil with anti-ulcer effects have been discussed in this review. A complete review of literature was conducted using different databases on ScienceDirect, Scopus, PubMed, and Google Scholar. This review is a genuine attempt to explore the past 10 years’ pharmacological update of some anti-ulcer agents.


2016 ◽  
Vol 81 (9) ◽  
pp. 979-997 ◽  
Author(s):  
Dominik Brkic ◽  
Aleksandra Bozic ◽  
Vesna Nikolic ◽  
Aleksandar Marinkovic ◽  
Hana Elshaflu ◽  
...  

The derivatives of isatin have already been reported to show a variety of biological activities. However, there has been no report on solvatochromic effect of isatin derivatives so far, and that could be of interest to study and relate to their electronic structure, as a part of the characterisation of these compounds. Linear solvation energy relationships (LSER) were used to analyze solvent influence on the UV absorption maxima shifts of investigated isatin derivatives, i.e. isatin based Schiff bases, by using Kamlet-Taft model. Linear free energy relationships (LFER) were applied to the substituent-induced NMR chemical shifts (SCS) using SSP (single substituent parameter). The obtained correlations together with theoretical calculations gave insight into the influence of the molecular conformation on the transmission of substituent effects, as well as on solute/solvent interactions. The molecular electrostatic potential (MEP) surface map was plotted over the optimized geometry of the molecules in order to visualize electron density distribution and explain origin of solvent/solute interactions.


2020 ◽  
Vol 12 (8) ◽  
pp. 995-1001
Author(s):  
Rênica Alves de Morais Rocha ◽  
Thaís Forest Giacomello ◽  
Antonio Maia de Jesus Chaves Neto ◽  
Gunar Vingre Da Silva Mota ◽  
Fabio Luiz Paranhos Costa

Nuclear magnetic resonance spectroscopy is one of the most powerful experimental techniques for obtaining three-dimensional structures of complex molecules, mainly for the analysis of the relative and absolute configurations of organic compounds. For this reason, this has become one of the most promising tools in the field of chemistry. From the theoretical point of view, advanced computational protocols have been developed for calculating nuclear magnetic resonance, mainly hydrogen-1 and carbon-13, parameters of isolated molecules, in which the environmental effects are neglected. These effects are predominantly related to the inherently large size of such systems, making conventional ab initio theories either very computationally demanding or even prohibitive. Despite the current advances in spectroscopic techniques, instances of revision of structures erroneously established for natural products are still common in the literature. Therefore, it is still necessary the development of quantum-chemical protocols that may assist in the correct structural determination of these compounds. This work aimed to test a universal scaling factor, based on a linear regression, for the calculation of carbon-13 nuclear magnetic resonance chemical shifts for rigid molecules, which has low computational cost and great accuracy to aid in the structural determination of natural products. The carbon-13 chemical shifts were calculated using the mPW1PW91/3-21G level of theory. Scaled chemical shifts were obtained according to the relation: 1.14x(calculated chemical shifts)–4.71. To test the application of the created scaling factor to problems related to stereochemistry, we investigated its ability to differentiate pentacyclic triterpenes regioisomers. Our results show that the mPW1PW91/3-21G//PM7 level of theory applied to the calculations, together with the use of the scaling factor, is an efficient and low-cost tool as an alternative to computational requirement approaches, usually applied to the calculation of carbon-13 nuclear magnetic resonance chemical shifts.


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