scholarly journals Establishing an infrastructure for collaboration in primate cognition research

Author(s):  
Manuel Bohn ◽  
Vanessa Schmitt ◽  
Alejandro Sanchez-Amaro ◽  
Stefanie Keupp ◽  
Lydia Hopper ◽  
...  

Inferring the evolutionary history of cognitive abilities requires large and diverse samples. However, such samples are often beyond the reach of individual researchers or institutions, and studies are often limited to small numbers of species. Consequently, methodological and site-specific-differences across studies can limit comparisons between species. Here we introduce the ManyPrimates project, which addresses these challenges by providing a large-scale collaborative framework for comparative studies in primate cognition. To demonstrate the viability of the project we conducted a case study of short-term memory. In this initial study, we were able to include 176 individuals from 12 primate species housed at 11 sites across Africa, Asia, North America and Europe. All subjects were tested in a delayed-response task using consistent methodology across sites. Individuals could access food rewards by remembering the position of the hidden reward after a 0, 15, or 30-second delay. Overall, individuals performed better with shorter delays, as predicted by previous studies. Phylogenetic analysis revealed a strong phylogenetic signal for short-term memory. Although, with only 12 species, the validity of this analysis is limited, our initial results demonstrate the feasibility of a large, collaborative open-science project. We present the ManyPrimates project as an exciting opportunity to address open questions in primate cognition and behaviour with large, diverse datasets.

2021 ◽  
Author(s):  
Many Primates

Short-term memory is implicated in a range of cognitive abilities and is critical for understanding primate cognitive evolution. To investigate the effects of phylogeny, ecology and sociality on short-term memory ability, we tested 421 non-human primates across 41 species in a pre-registered, experimental delayed-response task. Our results confirm previous findings that longer delays decrease memory performance across species and taxa. Our analyses demonstrate a considerable contribution of phylogeny over ecological and social factors on the distribution of short-term memory performance in primates; closely related species had more similar short-term memory abilities. However, interdependencies between phylogeny and socioecology of a given species present an obstacle to disentangling the effects of each of these factors on the evolution of short-term memory capacity. The dataset corresponding to the study is freely accessible and constitutes an important resource for studying the evolution of primate cognition.


2019 ◽  
Author(s):  
Joel Robitaille ◽  
Stephen Emrich

In the past two decades, significant advances have been made to understand the psychophysical properties of visual short-term memory (VSTM). Most studies, however, make inferences based on memory for simple surface features of 2D shapes. Here, we examined the role of object complexity and dimensionality on the psychophysical properties of VSTM by comparing orientation memory for 2D lines and complex 3D objects in a delayed-response continuous report task, where memory load (Experiment 1) or axis of rotation (Experiment 2) was manipulated. In both experiments, our results demonstrate an overall cost of complexity that affected participants raw errors as well as their guess rate and response precision derived from mixture modelling. We also demonstrate that participants’ memory performance is correlated between stimulus types and that memory performance for both 2D and 3D shapes is better fit to the variable precision model of VSTM than to tested competing models. Interestingly, the ability to report complex objects is not consistent across axes of rotation. These results indicate that, despite the fact that VSTM shares similar properties for 2D and 3D shapes, VSTM is far from being a unitary process and is affected by stimulus properties such as complexity and dimensionality.


2020 ◽  
Author(s):  
Erhan Genç ◽  
Caroline Schlüter ◽  
Christoph Fraenz ◽  
Larissa Arning ◽  
Huu Phuc Nguyen ◽  
...  

AbstractIntelligence is a highly polygenic trait and GWAS have identified thousands of DNA variants contributing with small effects. Polygenic scores (PGS) can aggregate those effects for trait prediction in independent samples. As large-scale light-phenotyping GWAS operationalized intelligence as performance in rather superficial tests, the question arises which intelligence facets are actually captured. We used deep-phenotyping to investigate the molecular determinantes of individual differences in cognitive ability. We therefore studied the association between PGS of educational attainment (EA-PGS) and intelligence (IQ-PGS) with a wide range of intelligence facets in a sample of 320 healthy adults. EA-PGS and IQ-PGS had the highest incremental R2s for general (3.25%; 1.78%), verbal (2.55%; 2.39%) and numerical intelligence (2.79%; 1.54%) and the weakest for non-verbal intelligence (0.50%; 0.19%) and short-term memory (0.34%; 0.22%). These results indicate that PGS derived from light-phenotyping GWAS do not reflect different facets of intelligence equally well, and thus should not be interpreted as genetic indicators of intelligence per se. The findings refine our understanding of how PGS are related to other traits or life outcomes.


2002 ◽  
Vol 10 (3-4) ◽  
pp. 185-199 ◽  
Author(s):  
Tom Ziemke ◽  
Mikael Thieme

This article addresses the relation between memory, representation, and adaptive behavior. More specifically, it demonstrates and discusses the use of synaptic plasticity, realized through neuromodulation of sensorimotor mappings, as a short-term memory mechanism in delayed response tasks. A number of experiments with extended sequential cascaded networks, that is, higher-order recurrent neural nets, controlling simple robotic agents in six different delayed response tasks are presented. The focus of the analysis is on how short-term memory is realized in such control networks through the dynamic modulation of sensorimotor mappings (rather than through feedback of neuronal activation, as in conventional recurrent nets), and how these internal dynamics interact with environmental/behavioral dynamics. In particular, it is demonstrated in the analysis of the last experimental scenario how this type of network can make very selective use of feedback/memory, while as far as possible limiting itself to the use of reactive sensorimotor mechanisms and occasional switches between them.


2020 ◽  
Author(s):  
Frederik Kratzert ◽  
Daniel Klotz ◽  
Günter Klambauer ◽  
Grey Nearing ◽  
Sepp Hochreiter

<p>Simulation accuracy among traditional hydrological models usually degrades significantly when going from single basin to regional scale. Hydrological models perform best when calibrated for specific basins, and do worse when a regional calibration scheme is used. </p><p>One reason for this is that these models do not (have to) learn hydrological processes from data. Rather, they have a predefined model structure and only a handful of parameters adapt to specific basins. This often yields less-than-optimal parameter values when the loss is not determined by a single basin, but by many through regional calibration.</p><p>The opposite is true for data driven approaches where models tend to get better with more and diverse training data. We examine whether this holds true when modeling rainfall-runoff processes with deep learning, or if, like their process-based counterparts, data-driven hydrological models degrade when going from basin to regional scale.</p><p>Recently, Kratzert et al. (2018) showed that the Long Short-Term Memory network (LSTM), a special type of recurrent neural network, achieves comparable performance to the SAC-SMA at basin scale. In follow up work Kratzert et al. (2019a) trained a single LSTM for hundreds of basins in the continental US, which outperformed a set of hydrological models significantly, even compared to basin-calibrated hydrological models. On average, a single LSTM is even better in out-of-sample predictions (ungauged) compared to the SAC-SMA in-sample (gauged) or US National Water Model (Kratzert et al. 2019b).</p><p>LSTM-based approaches usually involve tuning a large number of hyperparameters, such as the number of neurons, number of layers, and learning rate, that are critical for the predictive performance. Therefore, large-scale hyperparameter search has to be performed to obtain a proficient LSTM network.  </p><p>However, in the abovementioned studies, hyperparameter optimization was not conducted at large scale and e.g. in Kratzert et al. (2018) the same network hyperparameters were used in all basins, instead of tuning hyperparameters for each basin separately. It is yet unclear whether LSTMs follow the same trend of traditional hydrological models to degrade performance from basin to regional scale. </p><p>In the current study, we performed a computational expensive, basin-specific hyperparameter search to explore how site-specific LSTMs differ in performance compared to regionally calibrated LSTMs. We compared our results to the mHM and VIC models, once calibrated per-basin and once using an MPR regionalization scheme. These benchmark models were calibrated individual research groups, to eliminate bias in our study. We analyse whether differences in basin-specific vs regional model performance can be linked to basin attributes or data set characteristics.</p><p>References:</p><p>Kratzert, F., Klotz, D., Brenner, C., Schulz, K., and Herrnegger, M.: Rainfall–runoff modelling using Long Short-Term Memory (LSTM) networks, Hydrol. Earth Syst. Sci., 22, 6005–6022, https://doi.org/10.5194/hess-22-6005-2018, 2018. </p><p>Kratzert, F., Klotz, D., Shalev, G., Klambauer, G., Hochreiter, S., and Nearing, G.: Towards learning universal, regional, and local hydrological behaviors via machine learning applied to large-sample datasets, Hydrol. Earth Syst. Sci., 23, 5089–5110, https://doi.org/10.5194/hess-23-5089-2019, 2019a. </p><p>Kratzert, F., Klotz, D., Herrnegger, M., Sampson, A. K., Hochreiter, S., & Nearing, G. S.: Toward improved predictions in ungauged basins: Exploiting the power of machine learning. Water Resources Research, 55. https://doi.org/10.1029/2019WR026065, 2019b.</p>


2018 ◽  
Vol 62 (2) ◽  
pp. 260-280
Author(s):  
Payam Ghaffarvand Mokari ◽  
Stefan Werner

This study investigated the role of different cognitive abilities—inhibitory control, attention control, phonological short-term memory (PSTM), and acoustic short-term memory (AM)—in second language (L2) vowel learning. The participants were 40 Azerbaijani learners of Standard Southern British English. Their perception of L2 vowels was tested through a perceptual discrimination task before and after five sessions of high-variability phonetic training. Inhibitory control was significantly correlated with gains from training in the discrimination of L2 vowel pairs. However, there were no significant correlations between attention control, AM, PSTM, and gains from training. These findings suggest the potential role of inhibitory control in L2 phonological learning. We suggest that inhibitory control facilitates the processing of L2 sounds by allowing learners to ignore the interfering information from L1 during training, leading to better L2 segmental learning.


Behaviour ◽  
1969 ◽  
Vol 35 (1-2) ◽  
pp. 128-136 ◽  
Author(s):  
Bruno Cardu

AbstractThe behavior of seven rhesus monkeys on a test of non-spatial delayed response based on the method of second order sign behavior is reported. Four stimuli were used: two first order stimuli presented individually (two sounds or two lights) and two second order stimuli presented simultaneously (two objects). Subjects first learned to associate one of the objects to each of the two first order stimuli. An interval between the termination of the first signal and the moment of choice was then introduced; hence the subjects' short-term memory could be estimated. All subjects succeeded in this task; the limits of the memory span ranged from 20 to 45 seconds.


2017 ◽  
Author(s):  
Hidehiko K. Inagaki ◽  
Lorenzo Fontolan ◽  
Sandro Romani ◽  
Karel Svoboda

AbstractShort-term memories link events separated in time, such as past sensation and future actions. Short-term memories are correlated with selective persistent activity, which can be maintained over seconds. In a delayed response task that requires short-term memory, neurons in mouse anterior lateral motor cortex (ALM) show persistent activity that instructs future actions. To elucidate the mechanisms underlying this persistent activity we combined intracellular and extracellular electrophysiology with optogenetic perturbations and network modeling. During the delay epoch, both membrane potential and population activity of ALM neurons funneled towards discrete endpoints related to specific movement directions. These endpoints were robust to transient shifts in ALM activity caused by optogenetic perturbations. Perturbations occasionally switched the population dynamics to the other endpoint, followed by incorrect actions. Our results are consistent with discrete attractor dynamics underlying short-term memory related to motor planning.


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