scholarly journals InferNER: an attentive model leveraging the sentence-level information for Named Entity Recognition in Microblogs

2021 ◽  
Vol 34 (1) ◽  
Author(s):  
Moemmur Shahzad ◽  
Ayesha Amin ◽  
Diego Esteves ◽  
Axel-Cyrille Ngonga Ngomo
Keyword(s):  
Social Media ◽  
Visual Information ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Entity Recognition ◽  
Named Entity ◽  
Current State ◽  
Sentence Level ◽  
Level Information ◽  
External Sources

We investigate the problem of named entity recognition in the user-generated text such as social media posts. This task is rendered particularly difficult by the restricted length and limited grammatical coherence of this data type. Current state-of-the-art approaches rely on external sources such as gazetteers to alleviate some of these restrictions. We present a neural model able to outperform state of the art on this task without recurring to gazetteers or similar external sources of information. Our approach relies on word-, character-, and sentence-level information for NER in short-text. Social media posts like tweets often have associated images that may provide auxiliary context relevant to understand these texts. Hence, we also incorporate visual information and introduce an attention component which computes attention weight probabilities over textual and text-relevant visual contexts separately. Our model outperforms the current state of the art on various NER datasets. On WNUT 2016 and 2017, our model achieved 53.48\% and 50.52\% F1 score, respectively. With Multimodal model, our system also outperforms the current SOTA with an F1 score of 74\% on the multimodal dataset. Our evaluation further suggests that our model also goes beyond the current state-of-the-art on newswire data, hence corroborating its suitability for various NER tasks.

Named entity recognition for Polish

2019 ◽  
Vol 55 (2) ◽  
pp. 239-269
Author(s):  
Michał Marcińczuk ◽  
Aleksander Wawer
Keyword(s):  
Open Source ◽  
State Of The Art ◽  
Proper Names ◽  
Named Entity Recognition ◽  
Entity Recognition ◽  
Coarse Grained ◽  
Named Entity ◽  
Current State ◽  
Annotated Corpora ◽  
Available Resources

Abstract In this article we discuss the current state-of-the-art for named entity recognition for Polish. We present publicly available resources and open-source tools for named entity recognition. The overview includes various kind of resources, i.e. guidelines, annotated corpora (NKJP, KPWr, CEN, PST) and lexicons (NELexiconS, PNET, Gazetteer). We present the major NER tools for Polish (Sprout, NERF, Liner2, Parallel LSTM-CRFs and PolDeepNer) and discuss their performance on the reference datasets. In the article we cover identification of named entity mentions in the running text, local and global entity categorization, fine- and coarse-grained categorization and lemmatization of proper names.

scholarly journals Leveraging Multi-Token Entities in Document-Level Named Entity Recognition

2020 ◽  
Vol 34 (05) ◽  
pp. 7961-7968
Author(s):  
Anwen Hu ◽  
Zhicheng Dou ◽  
Jian-Yun Nie ◽  
Ji-Rong Wen
Keyword(s):  
Neural Networks ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Entity Recognition ◽  
Context Information ◽  
Named Entity ◽  
Sentence Level ◽  
Semantic Relevance ◽  
Recognition Systems ◽  
Document Level

Most state-of-the-art named entity recognition systems are designed to process each sentence within a document independently. These systems are easy to confuse entity types when the context information in a sentence is not sufficient enough. To utilize the context information within the whole document, most document-level work let neural networks on their own to learn the relation across sentences, which is not intuitive enough for us humans. In this paper, we divide entities to multi-token entities that contain multiple tokens and single-token entities that are composed of a single token. We propose that the context information of multi-token entities should be more reliable in document-level NER for news articles. We design a fusion attention mechanism which not only learns the semantic relevance between occurrences of the same token, but also focuses more on occurrences belonging to multi-tokens entities. To identify multi-token entities, we design an auxiliary task namely ‘Multi-token Entity Classification’ and perform this task simultaneously with document-level NER. This auxiliary task is simplified from NER and doesn't require extra annotation. Experimental results on the CoNLL-2003 dataset and OntoNotesnbm dataset show that our model outperforms state-of-the-art sentence-level and document-level NER methods.

scholarly journals We are not ready yet: limitations of transfer learning for Disease Named Entity Recognition

2021 ◽  
Author(s):  
Lisa Langnickel ◽  
Juliane Fluck
Keyword(s):  
Transfer Learning ◽  
Language Processing ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Clinical Applications ◽  
Entity Recognition ◽  
Data Sets ◽  
Named Entity ◽  
Current State ◽  
Biomedical Named Entity Recognition

Intense research has been done in the area of biomedical natural language processing. Since the breakthrough of transfer learning-based methods, BERT models are used in a variety of biomedical and clinical applications. For the available data sets, these models show excellent results - partly exceeding the inter-annotator agreements. However, biomedical named entity recognition applied on COVID-19 preprints shows a performance drop compared to the results on available test data. The question arises how well trained models are able to predict on completely new data, i.e. to generalize. Based on the example of disease named entity recognition, we investigate the robustness of different machine learning-based methods - thereof transfer learning - and show that current state-of-the-art methods work well for a given training and the corresponding test set but experience a significant lack of generalization when applying to new data. We therefore argue that there is a need for larger annotated data sets for training and testing.

scholarly journals Cross-type Biomedical Named Entity Recognition with Deep Multi-Task Learning

2018 ◽  
Author(s):  
Xuan Wang ◽  
Yu Zhang ◽  
Xiang Ren ◽  
Yuhao Zhang ◽  
Marinka Zitnik ◽  
...  
Keyword(s):  
State Of The Art ◽  
Named Entity Recognition ◽  
Network Models ◽  
Training Data ◽  
Entity Recognition ◽  
Neural Network Models ◽  
Named Entity ◽  
Task Learning ◽  
Level Information ◽  
Biomedical Named Entity Recognition

AbstractMotivationState-of-the-art biomedical named entity recognition (BioNER) systems often require handcrafted features specific to each entity type, such as genes, chemicals and diseases. Although recent studies explored using neural network models for BioNER to free experts from manual feature engineering, the performance remains limited by the available training data for each entity type.ResultsWe propose a multi-task learning framework for BioNER to collectively use the training data of different types of entities and improve the performance on each of them. In experiments on 15 benchmark BioNER datasets, our multi-task model achieves substantially better performance compared with state-of-the-art BioNER systems and baseline neural sequence labeling models. Further analysis shows that the large performance gains come from sharing character- and word-level information among relevant biomedical entities across differently labeled corpora.AvailabilityOur source code is available at https://github.com/yuzhimanhua/[email protected], [email protected].

Towards corpus and model: Hierarchical structured-attention-based features for Indonesian named entity recognition

2021 ◽  
pp. 1-12
Author(s):  
Yingwen Fu ◽  
Nankai Lin ◽  
Xiaotian Lin ◽  
Shengyi Jiang
Keyword(s):  
Language Processing ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Entity Recognition ◽  
Language Models ◽  
Neural Models ◽  
Performance Models ◽  
Named Entity ◽  
High Resource ◽  
Benchmark Datasets

Named entity recognition (NER) is fundamental to natural language processing (NLP). Most state-of-the-art researches on NER are based on pre-trained language models (PLMs) or classic neural models. However, these researches are mainly oriented to high-resource languages such as English. While for Indonesian, related resources (both in dataset and technology) are not yet well-developed. Besides, affix is an important word composition for Indonesian language, indicating the essentiality of character and token features for token-wise Indonesian NLP tasks. However, features extracted by currently top-performance models are insufficient. Aiming at Indonesian NER task, in this paper, we build an Indonesian NER dataset (IDNER) comprising over 50 thousand sentences (over 670 thousand tokens) to alleviate the shortage of labeled resources in Indonesian. Furthermore, we construct a hierarchical structured-attention-based model (HSA) for Indonesian NER to extract sequence features from different perspectives. Specifically, we use an enhanced convolutional structure as well as an enhanced attention structure to extract deeper features from characters and tokens. Experimental results show that HSA establishes competitive performance on IDNER and three benchmark datasets.

Named Entity Recognition and Relation Extraction

2021 ◽  
Vol 54 (1) ◽  
pp. 1-39
Author(s):  
Zara Nasar ◽  
Syed Waqar Jaffry ◽  
Muhammad Kamran Malik
Keyword(s):  
Deep Learning ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Relation Extraction ◽  
The State ◽  
Entity Recognition ◽  
Joint Models ◽  
Named Entity ◽  
Textual Data ◽  
Benchmark Datasets

With the advent of Web 2.0, there exist many online platforms that result in massive textual-data production. With ever-increasing textual data at hand, it is of immense importance to extract information nuggets from this data. One approach towards effective harnessing of this unstructured textual data could be its transformation into structured text. Hence, this study aims to present an overview of approaches that can be applied to extract key insights from textual data in a structured way. For this, Named Entity Recognition and Relation Extraction are being majorly addressed in this review study. The former deals with identification of named entities, and the latter deals with problem of extracting relation between set of entities. This study covers early approaches as well as the developments made up till now using machine learning models. Survey findings conclude that deep-learning-based hybrid and joint models are currently governing the state-of-the-art. It is also observed that annotated benchmark datasets for various textual-data generators such as Twitter and other social forums are not available. This scarcity of dataset has resulted into relatively less progress in these domains. Additionally, the majority of the state-of-the-art techniques are offline and computationally expensive. Last, with increasing focus on deep-learning frameworks, there is need to understand and explain the under-going processes in deep architectures.

scholarly journals Robust Multilingual Named Entity Recognition with Shallow Semi-supervised Features (Extended Abstract)

2017 ◽  
Author(s):  
Rodrigo Agerri ◽  
German Rigau
Keyword(s):  
Reproducibility Of Results ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Local Information ◽  
Entity Recognition ◽  
Shared Task ◽  
Competitive System ◽  
Named Entity ◽  
Text Understanding ◽  
Domain Models

We present a multilingual Named Entity Recognition approach based on a robust and general set of features across languages and datasets. Our system combines shallow local information with clustering semi-supervised features induced on large amounts of unlabeled text. Understanding via empiricalexperimentation how to effectively combine various types of clustering features allows us to seamlessly export our system to other datasets and languages. The result is a simple but highly competitive system which obtains state of the art results across five languages and twelve datasets. The results are reported on standard shared task evaluation data such as CoNLL for English, Spanish and Dutch. Furthermore, and despite the lack of linguistically motivated features, we also report best results for languages such as Basque and German. In addition, we demonstrate that our method also obtains very competitive results even when the amount of supervised data is cut by half, alleviating the dependency on manually annotated data. Finally, the results show that our emphasis on clustering features is crucial to develop robust out-of-domain models. The system and models are freely available to facilitate its use and guarantee the reproducibility of results.

scholarly journals BioALBERT: A Simple and Effective Pre-trained Language Model for Biomedical Named Entity Recognition

2020 ◽  
Author(s):  
Usman Naseem ◽  
Matloob Khushi ◽  
Vinay Reddy ◽  
Sakthivel Rajendran ◽  
Imran Razzak ◽  
...  
Keyword(s):  
State Of The Art ◽  
Language Model ◽  
Named Entity Recognition ◽  
Training Data ◽  
Entity Recognition ◽  
Future Research ◽  
Named Entity ◽  
Domain Specific ◽  
Context Dependent ◽  
Biomedical Named Entity Recognition

Abstract Background: In recent years, with the growing amount of biomedical documents, coupled with advancement in natural language processing algorithms, the research on biomedical named entity recognition (BioNER) has increased exponentially. However, BioNER research is challenging as NER in the biomedical domain are: (i) often restricted due to limited amount of training data, (ii) an entity can refer to multiple types and concepts depending on its context and, (iii) heavy reliance on acronyms that are sub-domain specific. Existing BioNER approaches often neglect these issues and directly adopt the state-of-the-art (SOTA) models trained in general corpora which often yields unsatisfactory results. Results: We propose biomedical ALBERT (A Lite Bidirectional Encoder Representations from Transformers for Biomedical Text Mining) - bioALBERT - an effective domain-specific pre-trained language model trained on huge biomedical corpus designed to capture biomedical context-dependent NER. We adopted self-supervised loss function used in ALBERT that targets on modelling inter-sentence coherence to better learn context-dependent representations and incorporated parameter reduction strategies to minimise memory usage and enhance the training time in BioNER. In our experiments, BioALBERT outperformed comparative SOTA BioNER models on eight biomedical NER benchmark datasets with four different entity types. The performance is increased for; (i) disease type corpora by 7.47% (NCBI-disease) and 10.63% (BC5CDR-disease); (ii) drug-chem type corpora by 4.61% (BC5CDR-Chem) and 3.89 (BC4CHEMD); (iii) gene-protein type corpora by 12.25% (BC2GM) and 6.42% (JNLPBA); and (iv) Species type corpora by 6.19% (LINNAEUS) and 23.71% (Species-800) is observed which leads to a state-of-the-art results. Conclusions: The performance of proposed model on four different biomedical entity types shows that our model is robust and generalizable in recognizing biomedical entities in text. We trained four different variants of BioALBERT models which are available for the research community to be used in future research.

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