scholarly journals Seroprevalance And Molecular Detection Of Fmdv In Cattle At Savar In Bangladesh

2020 ◽  
Vol 17 (2) ◽  
pp. 67-78
Author(s):  
N Jannat ◽  
MS Rahman ◽  
E Islam ◽  
NA Rumi ◽  
M Giasuddin ◽  
...  
Keyword(s):  
Molecular Detection ◽  
Control Measure ◽  
Clinical Signs ◽  
Effective Control ◽  
Clinical Samples ◽  
Infected Cattle ◽  
Economic Implications ◽  
Serotype A ◽  
Fmd Virus ◽  
Serotype O

The study was conducted to observe the overall seroprevalence and molecular detection of circulating FMD virus from infected cattle and efficacy of antibacterial drugs against secondary bacterial infection at Savar, Dhaka from January- December 2018. A total of 92 serum samples were collected for indirect c-ELISA to detect antibodies against non-structural proteins of FMD virus, and overall seroprevalence was 94.02%. The seroprevalence of serotype O and A was higher (95.83% and 95.83%) in male cattle than female (93.18% and 90.91%) respectively. 6 Months to 3 years aged cattle showed, significantly (p<0.01) higher seroprevalence (100%) than above 4 years age groups for serotype O (82.14%) and A (78.57%). Local cattle were more seropositive 96.88% compared to crossbred cattle 93.33% for serotype O and 91.67% for serotype A and this variation was not statistically significant (p>0.05). Among 10 clinical samples of FMD from infected cattle, 8 samples were positive for different serotypes, among them 2 each were identified as serotype A and Asia-1. On the other hand,4 samples were identified as mixed infection (1 sample of serotype O+A, 3 samples of O+Asia-1) by mRT-PCR. In this study on therapeutic intervention with sulphadimidine significantly (p<0.05) reduced the clinical signs of FMD than Gentamycin and Ampicillin. The higher seroprevalence of the disease has substantial economic implications which signify the need for devising effective control measure. However, the detection of ‘O’, Asia-1and ‘A’ serotype emphasizes the critical need for use of atrivalent vaccine in the field. SAARC J. Agri., 17(2): 67-78 (2019)

scholarly journals Isolation, Serotyping and Molecular Detection of Bovine FMD Virus from Outbreak Cases in Aba'ala District of Afar Region

2020 ◽  
Author(s):  
Teshager Dubie Tegegne ◽  
Tsedale Amare Mengiste
Keyword(s):  
Molecular Detection ◽  
Vaccine Development ◽  
Universal Primers ◽  
Clinical Samples ◽  
Effective Vaccine ◽  
Rt Pcr ◽  
Documentation System ◽  
Fmd Virus ◽  
Afar Region ◽  
Fmdv Serotypes

Abstract Background: Among the top listed economically important transboundary livestock diseases of cattle, foot and mouth disease (FMD) is the leading bottleneck in livestock production and productivity in Ethiopia. On the basis of FMDV active outbreak cases, a cross sectional study was undertaken to collect samples from January, 2019 to March, 2020 intended for isolation, serotyping and molecular detection of FMDV in the study district. Purposive sampling method was applied to select the study area for the reason that the presence of current active FMD outbreak case report during the study period. Totally, 27 FMD suspected clinical samples were collected from clinically affected study population during field outbreak. Out of 27 samples, 18 of them were inoculated on cultured Baby hamster kidney (BHK-21) monolayer cells and all 27 samples were tested using conventional RT-PCR and sets of specific universal primers. Finally, the PCR products were visualized with UV illumination and imaged with gel documentation system. Results: The current study result revealed that out of 18 clinical samples subjected to virus isolation, 72.2%(n=13) of these cultures exhibited FMDV induced cytopathic effect (CPE) and the identified serotype was SAT-2 FMD virus. Out of 27 clinical samples tested by conventional RT-PCR, only 12 FMDV samples were found to be FMDV positive by universal primers. Out of 27 clinical samples detected by conventional reverse transcription polymerase chain reaction (RT-PCR), only 12 FMDV samples were found to be FMDV positive by universal primers.Conclusions: Our study finding indicated FMDV is prevalent in the study area and FMDV serotype SAT-2 was the causality for the outbreaks of the disease in the study area. Hence, region wise regular FMD outbreaks investigation, further phylogenetic analysis and vaccine matching field isolates should be carried out to know in depth data about FMDV serotypes and topotypes involving in afar region of Ethiopia for effective vaccine development and control of the disease.

scholarly journals Isolation, Serotyping, and Molecular Detection of Bovine FMD Virus from Outbreak Cases in Abaʼala District of Afar Region, Ethiopia

2020 ◽  
Vol 2020 ◽  
pp. 1-9
Author(s):  
Teshager Dubie ◽  
Tsedale Amare
Keyword(s):  
Molecular Detection ◽  
Vaccine Development ◽  
Universal Primers ◽  
Clinical Samples ◽  
Effective Vaccine ◽  
Rt Pcr ◽  
Documentation System ◽  
Cross Sectional ◽  
Fmd Virus ◽  
Study Results

Background. On the basis of FMDV outbreak cases, a cross-sectional study was undertaken to collect samples from January 2019 to March 2020 intended for isolation, serotyping, and molecular detection of FMDV in the study district. The purposive sampling method was applied to select the study area for the reason of the presence of FMD outbreak case report during the study period. Totally, 27 FMD clinical samples were collected from affected study population during field outbreak. Out of 27 samples, 18 of them were inoculated on cultured Baby hamster kidney (BHK-21) monolayer cells, and all 27 samples were tested using conventional RT-PCR and sets of specific universal primers. Finally, the PCR products were visualized with UV illumination and imaged with gel documentation system. Results. The current study results revealed that out of 18 clinical samples subjected to virus isolation, 72.2% (n = 13) of these cultures exhibited FMDV-induced cytopathic effect (CPE) and the identified serotype was SAT-2 FMD virus. Out of 27 clinical samples tested by conventional RT-PCR, only 12 FMDV samples were found to be FMDV positive by universal primers. Out of 27 samples detected by conventional RT-PCR, only 12 FMDV samples were found to be FMDV positive by universal primers. Conclusions. Our study finding indicated that FMDV is prevalent in the study area and FMDV serotype SAT-2 was the causality for the outbreaks of the disease in the study area. Hence, region-wise FMD outbreak investigation, further phylogenetic analysis, and vaccine matching field isolates should be carried out for effective vaccine development to control the disease.

scholarly journals Molecular characterization of foot-and-mouth disease viruses collected from Northern and Central Ethiopia during the 2018 outbreak

2020 ◽  
Vol 13 (3) ◽  
pp. 542-548
Author(s):  
Yeneneh Tesfaye ◽  
Fazlurrahman Khan ◽  
Esayas Gelaye
Keyword(s):  
Gene Sequencing ◽  
Foot And Mouth Disease ◽  
Mouth Disease ◽  
Clinical Samples ◽  
Rt Pcr ◽  
Serotype A ◽  
Serotype O ◽  
Fmdv Serotypes ◽  
Virus Serotype ◽  
Foot And Mouth

Background and Aim: Foot-and-mouth disease (FMD) is endemic in several developing countries and affects poor farmers through loss of production, death of diseased animals, and loss of animal byproducts. Forty-three samples were collected from 12 sites of five geographical located areas from suspected FMD virus (FMDV)-infected cattle during 2018. This study aimed to isolate and characterize the FMDVs using reverse transcription-polymerase chain reaction (RT-PCR) and gene sequencing. Materials and Methods: Forty-three FMDV-suspected clinical samples cultured on BHK-21 cell were examined, followed by virus serotype identification using RT-PCR and gene sequencing. Results: Twenty-nine (67.44%) samples were cultured on BHK-21 cell, of which 14 (32.56%) were not isolated; the 43 samples were analyzed using FMDV screening primers and serotype-specific primers. The contribution of the disease-causing serotype was serotype O of 8 (18.60%) samples, serotype A of 20 (46.51%) samples, and mixed infection (O and A) of 1 (2.33%) sample. Serotypes O and A were further characterized by phylogenetic analysis, which grouped them under East Africa 3 and Africa topotypes of genotype IV, respectively. Interestingly, serotype A was isolated for the 1st time from Keyet sub-woreda and Mulo woreda of Ethiopia, and mixed serotypes (O and A) were identified from the purchased animal. Conclusion: Molecular test result, sequencing, and phylogenetic tree reconstruction analysis revealed that the 2018 FMD outbreak in Ethiopia was caused by FMDV serotypes O and A. FMDV serotype A was the predominant strain circulating in most study areas of the country. Infections in one sample with mixed serotypes of O and A were also reported. The authors recommend a vaccine matching study of those field isolated viruses with the vaccine strain.

Phylogenetic characterization of foot-and-mouth disease virus recovered from mithuns and yaks in India

2017 ◽  
Author(s):  
M. Rout ◽  
S Subramaniam ◽  
J. K. Mohapatra ◽  
A. Sanyal ◽  
B. B. Dash ◽  
...  
Keyword(s):  
Foot And Mouth Disease ◽  
Antigen Detection ◽  
Mouth Disease ◽  
Effective Control ◽  
Clinical Samples ◽  
Phylogenetic Characterization ◽  
Serotype O ◽  
Mouth Disease Virus ◽  
Foot And Mouth ◽  
Domestic Livestock

The yak and mithun husbandry in India is confronted with several challenges including the prevalence of foot-and-mouth disease (FMD). The present study was initiated to investigate FMD outbreaks in semi-domesticated mithun and yak population in various parts of India. A total of 64 clinical samples (vesicle/tongue/foot epithelium/fluid) from mithun and 6 from yak were collected from suspected FMD outbreaks during 2008-2013. Supernatants of the homogenized clinical samples were tested in a serotype discriminating antigen detection ELISA and ELISA-negative samples were further subjected to multiplex reverse transcription-polymerase chain reaction (mRT-PCR). A total of 45 mithun samples and only 1 yak sample were found positive for serotype O in antigen detection ELISA. A total of 12 ELISA-negative samples from mithun and 4 from yak were later on found positive for serotype O in mRT-PCR. The phylogenetic analysis based on VP1 genome indicated the involvement of both O/ME-SA/PanAsia and O/ME-SA/Ind2001 lineages of serotype O in those outbreaks. These viruses were genetically similar to those contemporary virus isolates responsible for FMD in domestic livestock indicating a situation of virus sharing among different species of domestic and semi-domestic animals. Thus, mithuns and yaks should be synchronously considered and targeted along with cattle for the effective control of the disease in the country.

scholarly journals Distribution of foot and mouth disease virus serotypes in cattle of Bangladesh

2017 ◽  
Vol 15 (1) ◽  
pp. 33-42 ◽  
Author(s):  
MS Islam ◽  
MA Habib ◽  
PC Saha ◽  
PM Das ◽  
MAH NA Khan
Keyword(s):  
Clinical Investigation ◽  
Foot And Mouth Disease ◽  
Mouth Disease ◽  
Infected Cattle ◽  
Rt Pcr ◽  
Fmd Virus ◽  
Serotype O ◽  
Mouth Disease Virus ◽  
Foot And Mouth ◽  
Time Required

Foot and mouth disease (FMD) is a highly contagious viral infection in cloven hoofed domestic and wild animals and endemic in many countries of the world including Bangladesh. Clinical investigation was carried out to identify natural cases of FMD and characteristics signs of FMD like salivation, ulceration in oral and pedal tissues and lameness was seen. The specific serotypes of FMD viruses involved in infected cattle were, therefore, identified using reverse transcriptase polymerase chain reaction (RT-PCR). Samples (N=97) from oral lesions was collected from infected cattle from seven divisions of Bangladesh during May to December, 2013. Viral RNA was extracted from the infected oral tissues and FMD virus specific uniplex RT-PCR was designed to detect FMD viruses. Multiplex RT-PCR was adapted to detect serotype specific amplicons. Out of 97 samples tested in uniplex and multiplex RT-PCR, 92 and 90 samples showed amplification reaction for FMD virus and viral serotypes respectively. Among the 90 FMD virus specific positive identification, single infectivity due to FMD viral Serotypes O, A and Asia 1 were seen in 56 (62.2%), 13 (14.4%) and 16 (17.8%) cases respectively. Three cattle (3.3%) were co-infected with FMD viral Serotypes O and Asia 1 and two (2.2%) with FMD viral Serotypes O and A. FMD viral serotype O was dominating all over the country followed by Asia1 and A. Cattle of Bangladesh were infected with FMD viral serotype O, A and Asia 1 alone or in combination. The RT-PCR protocols designed and adapted successfully detected FMD viruses and viral serotypes in a fraction of the time required for virus isolation and serological detection. These RT-PCR protocols can be used for rapid serotyping of FMD viruses from filed infectivity and selection of vaccine viruses.SAARC J. Agri., 15(1): 33-42 (2017)

Classical swine fever in pigs: recent developments and future perspectives

2014 ◽  
Vol 15 (1) ◽  
pp. 87-101 ◽  
Author(s):  
Vishal Chander ◽  
S. Nandi ◽  
C. Ravishankar ◽  
V. Upmanyu ◽  
Rishendra Verma
Keyword(s):  
Point Of Care ◽  
Clinical Signs ◽  
Classical Swine Fever ◽  
Diagnostic Techniques ◽  
Effective Control ◽  
Clinical Samples ◽  
High Morbidity ◽  
Phylogenetic Groups ◽  
Control Programs ◽  
Different Strains

AbstractClassical swine fever (CSF) is one of the most devastating epizootic diseases of pigs, causing high morbidity and mortality worldwide. The diversity of clinical signs and similarity in disease manifestations to other diseases make CSF difficult to diagnose with certainty. The disease is further complicated by the presence of a number of different strains belonging to three phylogenetic groups. Advanced diagnostic techniques allow detection of antigens or antibodies in clinical samples, leading to implementation of proper and effective control programs. Polymerase chain reaction (PCR)-based methods, including portable real-time PCR, provide diagnosis in a few hours with precision and accuracy, even at the point of care. The disease is controlled by following a stamping out policy in countries where vaccination is not practiced, whereas immunization with live attenuated vaccines containing the ‘C’ strain is effectively used to control the disease in endemic countries. To overcome the problem of differentiation of infected from vaccinated animals, different types of marker vaccines, with variable degrees of efficacy, along with companion diagnostic assays have been developed and may be useful in controlling and even eradicating the disease in the foreseeable future. The present review aims to provide an overview and status of CSF as a whole with special reference to swine husbandry in India.

scholarly journals A metapopulation model for highly pathogenic avian influenza: implications for compartmentalization as a control measure

2013 ◽  
Vol 142 (9) ◽  
pp. 1813-1825 ◽  
Author(s):  
S. NICKBAKHSH ◽  
L. MATTHEWS ◽  
S. W. J. REID ◽  
R. R. KAO
Keyword(s):  
Avian Influenza ◽  
Highly Pathogenic Avian Influenza ◽  
Control Measure ◽  
Effective Control ◽  
Poultry Industry ◽  
Long Distance ◽  
Highly Pathogenic ◽  
Economic Implications ◽  
Pathogenic Avian Influenza ◽  
Network Links

SUMMARYAlthough the compartmentalization of poultry industry components has substantial economic implications, and is therefore a concept with huge significance to poultry industries worldwide, the current requirements for compartment status are generic to all OIE member countries. We examined the consequences for potential outbreaks of highly pathogenic avian influenza in the British poultry industry using a metapopulation modelling framework. This framework was used to assess the effectiveness of compartmentalization relative to zoning control, utilizing empirical data to inform the structure of potential epidemiological contacts within the British poultry industry via network links and spatial proximity. Conditions were identified where, despite the efficient isolation of poultry compartments through the removal of network-mediated links, spatially mediated airborne spread enabled spillover of infection with nearby premises making compartmentalization a more ‘risky’ option than zoning control. However, when zoning control did not effectively inhibit long-distance network links, compartmentalization became a relatively more effective control measure than zoning. With better knowledge of likely distance ranges for airborne spread, our approach could help define an appropriate minimum inter-farm distance to provide more specific guidelines for compartmentalization in Great Britain.

scholarly journals Isolation, Serotyping and Molecular Detection of Bovine FMD Virus from Outbreak Cases in Aba'ala District of Afar Region

2020 ◽  
Author(s):  
Teshager Dubie Tegegne ◽  
Tsedale Amare Mengiste
Keyword(s):  
Molecular Detection ◽  
Vaccine Development ◽  
Universal Primers ◽  
Clinical Samples ◽  
Effective Vaccine ◽  
Rt Pcr ◽  
Documentation System ◽  
Fmd Virus ◽  
Afar Region ◽  
Fmdv Serotypes

Abstract Background: Among the top listed economically important transboundary livestock diseases of cattle, foot and mouth disease (FMD) is the leading bottleneck in livestock production and productivity in Ethiopia. On the basis of FMDV active outbreak cases, a cross sectional study was undertaken to collect samples from January, 2019 to March, 2020 intended for isolation, serotyping and molecular detection of FMDV in the study district. Purposive sampling method was applied to select the study area for the reason that the presence of current active FMD outbreak case report during the study period. Totally, 27 FMD suspected clinical samples were collected from clinically affected study population during field outbreak. Out of 27 samples, 18 of them were inoculated on cultured Baby hamster kidney (BHK-21) monolayer cells and all 27 samples were tested using conventional RT-PCR and sets of specific universal primers. Finally, the PCR products were visualized with UV illumination and imaged with gel documentation system. Results: The current study result revealed that out of 18 clinical samples subjected to virus isolation, 72.2%(n=13) of these cultures exhibited FMDV induced cytopathic effect (CPE) and the identified serotype was SAT-2 FMD virus. Out of 27 clinical samples tested by conventional RT-PCR, only 12 FMDV samples were found to be FMDV positive by universal primers. Out of 27 clinical samples detected by conventional reverse transcription polymerase chain reaction (RT-PCR), only 12 FMDV samples were found to be FMDV positive by universal primers.Conclusions: Our study finding indicated FMDV is prevalent in the study area and FMDV serotype SAT-2 was the causality for the outbreaks of the disease in the study area. Hence, region wise regular FMD outbreaks investigation, further phylogenetic analysis and vaccine matching field isolates should be carried out to know in depth data about FMDV serotypes and topotypes involving in afar region of Ethiopia for effective vaccine development and control of the disease.

Control of Bulking in an Extended Aeration Sewage Treatment Plant

1972 ◽  
Vol 7 (1) ◽  
pp. 13-20
Author(s):  
D.D.P. Cane ◽  
G.J. Farguhar
Keyword(s):  
Dissolved Oxygen ◽  
Control Measure ◽  
Sewage Treatment ◽  
Sewage Treatment Plant ◽  
Treatment Plant ◽  
Effective Control ◽  
Organic Loading Rate ◽  
Organic Loading ◽  
Mixed Liquor ◽  
Air Supply

Abstract A case of filamentous activated sludge bulking was investigated at an extended aeration plant treating wastes from a highway service centre. The purpose of the study was to find an effective control measure for the bulking and, if possible, to determine the cause of the bulking condition. Experiments were conducted to determine the effects upon bulking of: (a) a controlled copper dosage to the mixed liquor, (b) variations in the organic loading rate, and (c) maintenance of high and low dissolved oxygen concentrations in the mixed liquor. The microorganism responsible for the bulking condition was tentatively identified as Sphaerotilus natans. Extensive growths of these bacteria occurred in the sludge when the mixed liquor dissolved oxygen concentration dropped below 0.5 mg/1. Such dissolved oxygen levels had frequently occurred at this plant due to the use of timed aeration cycles and the use of insufficient air supply during peak loading periods. Variations in organic loading rates were found to have no adverse effect on sludge settleability. When bulking was slight, the condition could be improved by increasing the dissolved oxygen level to 1.5 mg/1, or more. The rate at which the filamentous growths could be eliminated from a highly filamentous sludge by increased aeration was very slow, but could be greatly increased by the simultaneous feeding of copper to the mixed liquor at a dosage rate of 1.0 mg/1, based on the raw sewage flows.

Characterizing the effectiveness of COVID-19 mitigation measures: A data-centric approach (Preprint)

2020 ◽  
Author(s):  
Lukman Olagoke ◽  
Ahmet E. Topcu
Keyword(s):  
Control Measure ◽  
Control Measures ◽  
World Health ◽  
Mitigation Measures ◽  
Effective Control ◽  
The World ◽  
Decision Making Processes ◽  
And Performance ◽  
Health Organization ◽  
The Impact

BACKGROUND COVID-19 represents a serious threat to both national health and economic systems. To curb this pandemic, the World Health Organization (WHO) issued a series of COVID-19 public safety guidelines. Different countries around the world initiated different measures in line with the WHO guidelines to mitigate and investigate the spread of COVID-19 in their territories. OBJECTIVE The aim of this paper is to quantitatively evaluate the effectiveness of these control measures using a data-centric approach. METHODS We begin with a simple text analysis of coronavirus-related articles and show that reports on similar outbreaks in the past strongly proposed similar control measures. This reaffirms the fact that these control measures are in order. Subsequently, we propose a simple performance statistic that quantifies general performance and performance under the different measures that were initiated. A density based clustering of based on performance statistic was carried out to group countries based on performance. RESULTS The performance statistic helps evaluate quantitatively the impact of COVID-19 control measures. Countries tend show variability in performance under different control measures. The performance statistic has negative correlation with cases of death which is a useful characteristics for COVID-19 control measure performance analysis. A web-based time-line visualization that enables comparison of performances and cases across continents and subregions is presented. CONCLUSIONS The performance metric is relevant for the analysis of the impact of COVID-19 control measures. This can help caregivers and policymakers identify effective control measures and reduce cases of death due to COVID-19. The interactive web visualizer provides easily digested and quick feedback to augment decision-making processes in the COVID-19 response measures evaluation. CLINICALTRIAL Not Applicable

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