scholarly journals Maize (Zea mays L.) Seedlings Rhizosphere Microbial Community as Responded to Acidic Biochar Amendment Under Saline Conditions

2021 ◽  
Vol 12 ◽  
Author(s):  
Mukesh Kumar Soothar ◽  
Abdoul Kader Mounkaila Hamani ◽  
Muhammad Fahad Sardar ◽  
Mahendar Kumar Sootahar ◽  
Yuanyuan Fu ◽  
...  
Keyword(s):  
Microbial Community ◽  
Microbial Biomass ◽  
Relative Abundance ◽  
Soil Microbial Biomass ◽  
Bacterial Abundance ◽  
Principal Component ◽  
Alpha Diversity ◽  
Maize Seedlings ◽  
Soil Microbial ◽  
Abundance And Diversity

Biochar has extensively been used for multiple purposes in agriculture, including improving soil microbial biomass. The current study aimed to investigate the effect of acidic biochar on maize seedlings’ rhizosphere bacterial abundance under salinity. There were seven treatments and three replicates in a controlled greenhouse coded as B0S1, B1S1, and B2S1 and B0S2, B1S2, and B2S2. CK is control (free of biochar and salt); B0, B1, and B2 are 0, 15, and 30 g biochar (kg soil)–1; and S1 and S2 are 2.5 and 5 g salt pot–1 that were amended, respectively. After harvesting the maize seedlings, the soil samples were collected and analyzed for soil microbial biomass, bacterial abundance, and diversity. The results revealed that relative abundance of Proteobacteria, Actinobacteria, and Chloroflexi increased on phylum level, whereas Actinomarinales, Alphaproteobacteria, and Streptomyces enhanced on genus level, respectively, in B2S1 and B2S2, when compared with CK and non-biochar amended soil under saline conditions. The relative abundance of Actinomarinales was positively correlated with total potassium (TK) and Gematimonadetes negatively correlated with total phosphorus (TP). Biochar addition slightly altered the Ace1, Chao1, and alpha diversity. Principal component analysis corresponded to the changes in soil bacterial community that were closely associated with biochar when compared with CK and salt-treated soils. In conclusion, acidic biochar showed an improved soil microbial community under salinity.

scholarly journals Soil microbial biomass and function are altered by 12 years of crop rotation

2016 ◽  
Author(s):  
Marshall D. McDaniel ◽  
A. Stuart Grandy
Keyword(s):  
Microbial Community ◽  
Microbial Biomass ◽  
Crop Rotation ◽  
Soil Microbial Biomass ◽  
Cropping Systems ◽  
Growing Season ◽  
Plant Biodiversity ◽  
Soil Microbial ◽  
Catabolic Potential ◽  
And Function

Abstract. Agriculture-driven declines in plant biodiversity reduce soil microbial biomass, alter microbial functions, and threaten the provisioning of soil ecosystem services. We examined whether increasing temporal plant biodiversity (by rotating crops) can partially reverse these trends and enhance microbial biomass and function. We quantified seasonal patterns in soil microbial biomass, respiration rates, extracellular enzyme activity, and catabolic potential three times over one growing season in a 12-year crop rotation study at the W.K. Kellogg Biological Station LTER. Rotation treatments varied from one to five crops in a three-year rotation cycle, but all soils were sampled under corn to isolate historical rotation effects from current crop effects. Inorganic N, the stoichiometry of microbial biomass and dissolved organic C and N varied seasonally, likely reflecting fluctuations in soil resources during the growing season. Soils from biodiverse cropping systems increased microbial biomass C by 28–112 % and N by 18–58 % compared to monoculture corn. Rotations increased potential C mineralization by as much as 64 %, and potential N mineralization by 62 %, and both were related to substantially higher hydrolase and lower oxidase enzyme activities. The catabolic potential of the microbial community, assessed with community-level physiological profiling, showed that microbial communities in monoculture corn preferentially used simple substrates like carboxylic acids, relative to more diverse cropping systems. By isolating plant biodiversity from differences in fertilization and tillage, our study illustrates that crop biodiversity has overarching effects on soil microbial biomass and function that last throughout the growing season. In simplified agricultural systems, relatively small increases in plant biodiversity have a large impact on microbial community size and function.

Nitrogen- and sulfur-deposition-altered soil microbial community functions and enzyme activities in a boreal mixedwood forest in western Canada

2013 ◽  
Vol 43 (9) ◽  
pp. 777-784 ◽  
Author(s):  
Ya-Lin Hu ◽  
Kangho Jung ◽  
De-Hui Zeng ◽  
Scott X. Chang
Keyword(s):  
Microbial Community ◽  
Microbial Biomass ◽  
Soil Microbial Community ◽  
Oil Sands ◽  
Soil Microbial Biomass ◽  
Soil Microbial ◽  
C And N ◽  
Boreal Mixedwood Forest ◽  
The Impact ◽  
S Deposition

Chronic nitrogen (N) and (or) sulfur (S) deposition to boreal forests in the Athabasca oil sands region (AOSR) in Alberta, Canada, has been caused by oil sands mining and extraction/upgrading activities. It is important that we understand the response of microbial community function to chronic N and S deposition as microbial populations mediate soil carbon (C) and N cycles and affect ecosystem resilience. To evaluate the impact of N and (or) S deposition on soil microbial community functions, we conducted a simulated N and S deposition experiment in a boreal mixedwood forest with the following four treatments: control (CK), N addition (+N, 30 kg N·ha−1 as NH4NO3), S addition (+S, 30 kg S·ha−1 as NaSO4), and N plus S addition (+NS, 30 kg N·ha−1 + 30 kg S·ha−1), from 2006 to 2010. Nitrogen and (or) S deposition did not change soil organic carbon, total N, dissolved organic C and N, or soil microbial biomass C and N. Soil microbial community-level physiological profiles, however, were strongly affected by 5 years of N and (or) S addition. Soil β-glucosidase activity in the +NS treatment was greater than that in the +S treatment, and S addition decreased soil arylsulfatase; however, urease and dehydrogenase activities were not affected by the simulated N and (or) S deposition. Our data suggested that N and (or) S deposition strongly affected soil microbial community functions and enzymatic activities without changing soil microbial biomass in the studied boreal forest.

scholarly journals Cover crop residue diversity enhances microbial activity and biomass with additive effects on microbial structure

2021 ◽  
Author(s):  
Xin Shu ◽  
Yiran Zou ◽  
Liz J. Shaw ◽  
Lindsay Todman ◽  
Mark Tibbett ◽  
...  
Keyword(s):  
Microbial Community ◽  
Microbial Biomass ◽  
Soil Respiration ◽  
Microbial Activity ◽  
Cover Crop ◽  
Crop Residue ◽  
Soil Microbial Biomass ◽  
Crop Residues ◽  
Soil Functions ◽  
Soil Microbial

AbstractCover crops have been widely used in agroecosystems to improve soil fertility and environmental sustainability. The decomposition of cover crop residues can have further effects on belowground communities and their activity, which is important for a series of soil functions (e.g., nutrient cycling and organic matter decomposition). We tested the effect of plant residues from a range of cover crop species on soil microbial activity and community assemblage. We predicted that cover crop residues would alter the soil microbial community and that a greater diversity of residues would enhance microbial decomposition. In an incubation study, we assessed the effect of crop residue diversity on microbial activity (soil respiration) and its consequent effects on microbial community composition (PLFA). We used either a biodiverse mixture of four cover crop residues (buckwheat, clover, sunflower and radish) or an equal mass of the residues of each of the individual species. The diverse mixture of cover crop residues had a significantly (P < 0.05) greater soil respiration rate, by 57.61 µg C g−1 h−1, than the average of the four individual residues, but did not have a significantly different soil microbial biomass or microbial community structure. This finding could be attributed to a greater diversity of organic resources increasing the number biochemical niches, and hence activating dormant microbial communities to increase microbial activity without affecting microbial biomass or community composition. Greater respiration from similar microbial biomasses suggests that microbial activity might be more efficient after a more diverse substrate input. This study confirms the positive impact of cover crop residues on soil microbial biomass and activity and highlights that mixtures of cover crop residues may deliver enhanced soil functions beyond the sum of individual cover crop residues.

scholarly journals Soil microbial biomass and function are altered by 12 years of crop rotation

SOIL ◽  
2016 ◽  
Vol 2 (4) ◽  
pp. 583-599 ◽  
Author(s):  
Marshall D. McDaniel ◽  
A. Stuart Grandy
Keyword(s):  
Microbial Community ◽  
Microbial Biomass ◽  
Crop Rotation ◽  
Soil Microbial Biomass ◽  
Cropping Systems ◽  
Growing Season ◽  
Plant Biodiversity ◽  
Soil Microbial ◽  
Catabolic Potential ◽  
And Function

Abstract. Declines in plant diversity will likely reduce soil microbial biomass, alter microbial functions, and threaten the provisioning of soil ecosystem services. We examined whether increasing temporal plant biodiversity in agroecosystems (by rotating crops) can partially reverse these trends and enhance soil microbial biomass and function. We quantified seasonal patterns in soil microbial biomass, respiration rates, extracellular enzyme activity, and catabolic potential three times over one growing season in a 12-year crop rotation study at the W. K. Kellogg Biological Station LTER. Rotation treatments varied from one to five crops in a 3-year rotation cycle, but all soils were sampled under a corn year. We hypothesized that crop diversity would increase microbial biomass, activity, and catabolic evenness (a measure of functional diversity). Inorganic N, the stoichiometry of microbial biomass and dissolved organic C and N varied seasonally, likely reflecting fluctuations in soil resources during the growing season. Soils from biodiverse cropping systems increased microbial biomass C by 28–112 % and N by 18–58 % compared to low-diversity systems. Rotations increased potential C mineralization by as much as 53 %, and potential N mineralization by 72 %, and both were related to substantially higher hydrolase and lower oxidase enzyme activities. The catabolic potential of the soil microbial community showed no, or slightly lower, catabolic evenness in more diverse rotations. However, the catabolic potential indicated that soil microbial communities were functionally distinct, and microbes from monoculture corn preferentially used simple substrates like carboxylic acids, relative to more diverse cropping systems. By isolating plant biodiversity from differences in fertilization and tillage, our study illustrates that crop biodiversity has overarching effects on soil microbial biomass and function that last throughout the growing season. In simplified agricultural systems, relatively small increases in crop diversity can have large impacts on microbial community size and function, with cover crops appearing to facilitate the largest increases.

scholarly journals Effects of simulated nitrogen deposition on soil microbial biomass and community function in subtropical evergreen broad-leaved forest

2019 ◽  
Vol 28 (3) ◽  
pp. e018
Author(s):  
Jingjing Wang ◽  
Jun Cui ◽  
Zhen Teng ◽  
Wei Fan ◽  
Mengran Guan ◽  
...  
Keyword(s):  
Microbial Community ◽  
Microbial Biomass ◽  
Soil Microbial Biomass ◽  
Diversity Indices ◽  
N Deposition ◽  
N Addition ◽  
Soil Microbial ◽  
Community Function ◽  
Old Growth Forest ◽  
Dormant Season

Aim of the study: The aim of this study was to examine the effects of a 5-year simulated nitrogen (N) deposition on soil microbial biomass carbon (MBC), nitrogen (MBN), microbial community activity and diversity in subtropical old-growth forest ecosystems.Area of study: The study was conducted in forest located at subtropical forest in Anhui, east China.Material and methods: Three blocks with three fully randomized plots of 20 m × 20 m with similar forest community and soil conditions were established. The site applied ammonium nitrate (NH4NO3) to simulate N deposition (50 and 100 kg N ha−1 year −1). From three depths (0–10, 10–20 and 20–30 cm), were collected over four seasons (December, March, June and September), and then measured by community-level physiological profiles (CLPPs).Main results: N addition had no significant effect on MBC and MBN. The spatiotemporal variations in MBC and MBN were controlled by seasonality and soil depth. Soil microbial activities and diversity in the growing season (June and September) were apparently higher than the dormant season (March and December), there were significantly lower diversity indices found following N addition in September. However, N addition enhanced microbial activities and increased diversity indices in the dormant season. Redundancy analysis showed that pH, soil moisture, NO3--N and total phosphorus were the most important factors controlling the spatial pattern of microbial metabolic activity.Research highlights: These results suggest that soil microbial community function is more easily influenced than microbial biomass. The site has a trend of P-limited or near-N saturation, and will threaten the whole forest ecosystem with the increasing duration of N addition.Keywords: Nitrogen deposition; Seasonality; Soil microbial biomass; Microbial community; Subtropical old-growth forest.

scholarly journals Altitude and Vegetation Affect Soil Organic Carbon, Basal Respiration and Microbial Biomass in Apennine Forest Soils

Forests ◽  
2020 ◽  
Vol 11 (6) ◽  
pp. 710
Author(s):  
Luisa Massaccesi ◽  
Mauro De Feudis ◽  
Angelo Leccese ◽  
Alberto Agnelli
Keyword(s):  
Microbial Community ◽  
Microbial Biomass ◽  
Organic Carbon ◽  
Soil Organic Carbon ◽  
Forest Soils ◽  
Soil Microbial Community ◽  
Soil Microbial Biomass ◽  
Pine Forests ◽  
Soil Microbial ◽  
Ostrya Carpinifolia

Both altitude and vegetation are known to affect the amount and quality of soil organic matter (SOM) and the size and activity of soil microbial biomass. However, when altitude and vegetation changes are combined, it is still unclear which one has a greater effect on soil chemical and biochemical properties. With the aim of clarifying this, we tested the effect of altitude (and hence temperature) and vegetation (broadleaf vs pine forests) on soil organic carbon (SOC) and soil microbial biomass and its activity. Soil sampling was carried out in two adjacent toposequences ranging from 500 to 1000 m a.s.l. on a calcareous massif in central Italy: one covered only by Pinus nigra J.F. Arnold forests, while the other covered by Quercus pubescens Willd., Ostrya carpinifolia Scop. and Fagus sylvatica L. forests, at 500, 700 and 1000 m a.s.l., respectively. The content of SOC and water-extractable organic carbon (WEOC) increased with altitude for the pine forests, while for the broadleaf forests no trend along the slope occurred, and the highest SOC and WEOC contents were observed in the soil at 700 m under the Ostrya carpinifolia forest. With regard to the soil microbial community, although the size of the soil microbial biomass (Cmic) generally followed the SOC contents along the slope, both broadleaf and pine forest soils showed similar diminishing trends with altitude of soil respiration (ΣCO2-C), and ΣCO2-C:WEOC and ΣCO2-C:Cmic ratios. The results pointed out that, although under the pine forests’ altitude was effective in affecting WEOC and SOC contents, in the soils along the broadleaf forest toposequence this effect was absent, indicating a greater impact of vegetation than temperature on SOC amount and pool distribution. Conversely, the similar trend with altitude of the microbial activity indexes would indicate temperature to be crucial for the activity of the soil microbial community.

scholarly journals Influence of Thorny Bamboo Plantations on Soil Microbial Biomass and Community Structure in Subtropical Badland Soils

Forests ◽  
2019 ◽  
Vol 10 (10) ◽  
pp. 854 ◽  
Author(s):  
Chang ◽  
Tian ◽  
Shiau ◽  
Chen ◽  
Chiu
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Biomass ◽  
Soil Microbial Community ◽  
Soil Microbial Biomass ◽  
Soil Microbes ◽  
Organic C ◽  
Soil Microbial ◽  
Bamboo Plantation ◽  
Bare Land

Vegetation in southeastern Taiwan plays an important role in rehabilitating badland soils (high silt and clay content) and maintaining the soil microbial community. The establishment of thorny bamboo (Bambusa stenostachya Hackel) may have had a profound impact on the abundance and community structure of soil microorganisms. However, little is known regarding the influence of bamboo on soil biota in the badland ecosystem. The present study was conducted at three badland sites in southwestern Taiwan and focused on the measurement of phospholipid fatty acids (PLFA) together with soil microbial biomass C (Cmic) and N (Nmic) contents, enzyme activities, and denaturing gradient gel electrophoresis (DGGE) assessments. The abundances of whole soil microbes as well as bacterial and fungal groups—as evident by PLFA, Cmic and Nmic contents—were much higher in the bamboo plantation soils than the bare land soils. The increased soil organic matter in bamboo plantations relative to the control largely explained the enhancement, the abundance and diversity in the soil microbial community. Principal component analysis of individual PLFA peaks separated the bamboo plantation soil from the non-plantation bare land soil. DGGE analysis also revealed a difference in both bacterial and fungal community structures between soil types. Redundancy analysis of PLFA peak abundance and soil properties indicated that microbial community structure was positively correlated with soil organic C and total N and negatively correlated with pH. This differentiation could be attributed to bamboo in suitable habitats providing an essential nutrient source for soil microbes. The pH reduction in these alkaline soils also contributed to the increase in the size of the microbial community in bamboo-regenerated soils. Together, the results of this study indicate that bamboo plantations are beneficial for soil microbial activities and soil quality in badland areas.

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