Phosphorus dynamics during early soil development in a cold desert: insights from oxygen isotopes in phosphate

At the early stages of pedogenesis, the dynamics of phosphorus (P) in soils are controlled by microbial communities, the physicochemical properties of the soil and the environmental conditions. While various microorganisms involved in carrying out biogeochemical processes have been identified, little is known about the actual contribution of microbial processes, such as organic P hydrolysis and microbial P turnover, to P cycling. We thus focused on processes driven by microbes and how they affect the size and cycling of organic and inorganic soil P pools along a soil chronosequence in the Chamser Kangri glacier forefield (Western Himalayas). The rapid retreat of the glacier allowed us to study the early stages of soil formation under a cold arid climate. Biological P transformations were studied with the help of the isotopic composition of oxygen (O) in phosphate (δ18OP) coupled to sequential P fractionation performed on soil samples (0–5 cm depth) from four sites of different age spanning 0 to 100–150 years. The P bound to Ca, i.e., 1 M HCl-extractable P, still represented 95 % of the total P stock after approximately 100 years of soil development. Its isotopic composition was similar to the parent material at the most developed site. Primary phosphate minerals, possibly apatite, mostly comprised this pool. The δ18OP of the available P and the NaOH-extractable inorganic P instead differed from that of the parent material, suggesting that these pools underwent biological turnover. The δ18OP of the available P was mostly controlled by the microbial P, suggesting fast exchanges occurred between these two pools possibly fostered by repeated freezing–thawing and drying–rewetting cycles. The release of P from organic P becomes increasingly important with soil age, constituting one-third of the P flux to available P at the oldest site. Accordingly, the lighter isotopic composition of the P bound to Fe and Al oxides at the oldest site indicated that this pool contained phosphate released by organic P mineralization. Compared to previous studies on early pedogenesis under alpine or cold climate, our findings suggest a much slower decrease of the P-bearing primary minerals during the first 100 years of soil development under extreme conditions. However, they provide evidence that, by driving short-term P dynamics, microbes play an important role in controlling the redistribution of primary P into inorganic and organic soil P pools.

Biochar alters hydraulic conductivity and impacts nutrient leaching in two agricultural soils

Biochar is purported to provide agricultural benefits when added to the soil, through changes in saturated hydraulic conductivity (Ksat) and increased nutrient retention through chemical or physical means. Despite increased interest and investigation, there remains uncertainty regarding the ability of biochar to deliver these agronomic benefits due to differences in biochar feedstock, production method, production temperature, and soil texture. In this project, a suite of experiments was carried out using biochars of diverse feedstocks and production temperatures, in order to determine the biochar parameters which may optimize agricultural benefits. Sorption experiments were performed with seven distinct biochars to determine sorption efficiencies for ammonium and nitrate. Only one biochar effectively retained nitrate, while all biochars bound ammonium. The three biochars with the highest binding capacities (produced from almond shell at 500 and 800 ∘C (AS500 and AS800) and softwood at 500 ∘C (SW500)) were chosen for column experiments. Biochars were amended to a sandy loam and a silt loam at 0 % and 2 % (w/w), and Ksat was measured. Biochars reduced Ksat in both soils by 64 %–80 %, with the exception of AS800, which increased Ksat by 98 % in the silt loam. Breakthrough curves for nitrate and ammonium, as well as leachate nutrient concentration, were also measured in the sandy loam columns. All biochars significantly decreased the quantity of ammonium in the leachate, by 22 % to 78 %, and slowed its movement through the soil profile. Ammonium retention was linked to high cation exchange capacity and a high oxygen-to-carbon ratio, indicating that the primary control of ammonium retention in biochar-amended soils is the chemical affinity between biochar surfaces and ammonium. Biochars had little to no effect on the timing of nitrate release, and only SW500 decreased total quantity, by 27 % to 36 %. The ability of biochar to retain nitrate may be linked to high micropore specific surface area, suggesting a physical entrapment rather than a chemical binding. Together, this work sheds new light on the combined chemical and physical means by which biochar may alter soils to impact nutrient leaching and hydraulic conductivity for agricultural production.

Assessing soil and land health across two landscapes in eastern Rwanda to inform restoration activities

Land degradation negatively impacts water, food, and nutrition security and is leading to increased competition for resources. While landscape restoration has the potential to restore ecosystem function, understanding the drivers of degradation is critical for prioritizing and tracking interventions. We sampled 300–1000 m2 plots using the Land Degradation Surveillance Framework across Nyagatare and Kayonza districts in Rwanda to assess key soil and land health indicators, including soil organic carbon (SOC), erosion prevalence, vegetation structure and infiltration capacity, and their interactions. SOC content decreased with increasing sand content across both sites and sampling depths and was lowest in croplands and grasslands compared to shrublands and woodlands. Stable carbon isotope values (δ13C) ranged from −15.35 ‰ to −21.34 ‰, indicating a wide range of historic and current plant communities with both C3 and C4 photosynthetic pathways. Field-saturated hydraulic conductivity (Kfs) was modeled, with a median of 76 mm h−1 in Kayonza and 62 mm h−1 in Nyagatare, respectively. Topsoil OC had a positive effect on Kfs, whereas pH, sand, and erosion had negative effects. Soil erosion was highest in plots classified as woodland and shrubland. Maps of soil erosion and SOC at 30 m resolution were produced with high accuracy and showed strong variability across the study landscapes. These data demonstrate the importance of assessing multiple biophysical properties in order to assess land degradation, including the spatial patterns of soil and land health indicators across the landscape. By understanding the dynamics of land degradation and interactions between biophysical indicators, we can better prioritize interventions that result in multiple benefits as well as assess the impacts of restoration options.

Transformation of <i>n</i>-alkanes from plant to soil: a review

Despite the importance of soil organic matter (SOM) in the global carbon cycle, there remain many open questions regarding its formation and preservation. The study of individual organic compound classes that make up SOM, such as lipid biomarkers including n-alkanes, can provide insight into the cycling of bulk SOM. While studies of lipid biomarkers, particularly n-alkanes, have increased in number in the past few decades, only a limited number have focused on the transformation of these compounds following deposition in soil archives. We performed a systematic review to consolidate the available information on plant-derived n-alkanes and their transformation from plant to soil. Our major findings were (1) a nearly ubiquitous trend of decreased total concentration of n-alkanes either with time in litterbag experiments or with depth in open plant–soil systems and (2) preferential degradation of odd-chain length and shorter chain length n-alkanes represented by a decrease in either carbon preference index (CPI) or odd-over-even predominance (OEP) with depth, indicating degradation of the n-alkane signal or a shift in vegetation composition over time. The review also highlighted a lack of data transparency and standardization across studies of lipid biomarkers, making analysis and synthesis of published data time-consuming and difficult. We recommend that the community move towards more uniform and systematic reporting of biomarker data. Furthermore, as the number of studies examining the complete leaf–litter–soil continuum is very limited as well as unevenly distributed over geographical regions, climate zones, and soil types, future data collection should focus on underrepresented areas as well as quantifying the transformation of n-alkanes through the complete continuum from plant to soil.

Combining colour parameters and geochemical tracers to improve sediment source discrimination in a mining catchment (New Caledonia, South Pacific Islands)

Tracing the origin of sediment is needed to improve our knowledge of hydro-sedimentary dynamics at the catchment scale. Several fingerprinting approaches have been developed to provide this crucial information. In particular, spectroscopy provides a rapid, inexpensive and non-destructive alternative technique to the conventional analysis of the geochemical properties. Here, we investigated the performance of four multi-proxy approaches based on (1) colour parameters, (2) geochemical properties, (3) colour parameters coupled with geochemical properties and (4) the entire visible spectrum to discriminate sediment source contributions in a mining catchment of New Caledonia. This French archipelago located in the south-west Pacific Ocean is the world's sixth largest producer of nickel. Open-cast nickel mining increases soil degradation and the downstream transfer of sediments in river systems, leading to the river system siltation. The sediment sources considered in the current research were therefore sediment eroded from mining sub-catchments and non-mining sub-catchments. To this end, sediment deposited during two cyclonic events (i.e. 2015 and 2017) was collected following a tributary design approach in one of the first areas exploited for nickel mining on the archipelago, the Thio River catchment (397 km2). Source (n=24) and river sediment (n=19) samples were analysed by X-ray fluorescence and spectroscopy in the visible spectra (i.e. 365–735 nm). The results demonstrated that the individual sediment tracing methods based on spectroscopy measurements (i.e. (1) and (4)) were not able to discriminate sources. In contrast, the geochemical approach (2) did discriminate sources, with 83.1 % of variance in sources explained. However, it is the inclusion of colour properties in addition to geochemical parameters (3) which provides the strongest discrimination between sources, with 92.6 % of source variance explained. For each of these approaches ((2) and (3)), the associated fingerprinting properties were used in an optimized mixing model. The predictive performance of the models was validated through tests with artificial mixture samples, i.e. where the proportions of the sources were known beforehand. Although with a slightly lower discrimination potential, the “geochemistry” model (2) provided similar predictions of sediment contributions to those obtained with the coupled “colour + geochemistry” model (3). Indeed, the geochemistry model (2) showed that mining tributary contributions dominated the sediments inputs, with a mean contribution of 68 ± 25 % for the 2015 flood event, whereas the colour + geochemistry model (3) estimated that the mining tributaries contributed 65 ± 27 %. In a similar way, the contributions of mining tributaries were evaluated to 83 ± 8 % by the geochemistry model (2) versus 88 ± 8 % by the colour + geochemistry model (3) for the 2017 flood event. Therefore, the use of these approaches based on geochemical properties only (2) or of those coupled to colour parameters (3) was shown to improve source discrimination and to reduce uncertainties associated with sediment source apportionment. These techniques could be extended to other mining catchments of New Caledonia but also to other similar nickel mining areas around the world.

Soil <i>δ</i>¹⁵N is a better indicator of ecosystem nitrogen cycling than plant <i>δ</i>¹⁵N: A global meta-analysis

The nitrogen-15 (15N) natural abundance composition (δ15N) in soils or plants is a useful tool to indicate the openness of ecosystem N cycling. This study aimed to evaluate the influence of the experimental warming on soil and plant δ15N. We applied a global meta-analysis method to synthesize 79 and 76 paired observations of soil and plant δ15N from 20 published studies, respectively. Results showed that the mean effect sizes of the soil and plant δ15N under experimental warming were −0.524 (95 % CI (confidence interval): −0.987 to −0.162) and 0.189 (95 % CI: −0.210 to 0.569), respectively. This indicated that soil δ15N had negative response to warming at the global scale, where warming had no significant effect on plant δ15N. Experimental warming significantly (p<0.05) decreased soil δ15N in Alkali and medium-textured soils, in grassland/meadow, under air warming, for a 4–10-year warming period and for an increase of >3 ∘C in temperature, whereas it significantly (p<0.05) increased soil δ15N in neutral and fine-textured soils and for an increase of 1.5–3 ∘C in temperature. Plant δ15N significantly (p<0.05) increased with increasing temperature in neutral and fine-textured soils and significantly (p<0.05) decreased in alkali soil. Latitude did not affect the warming effects on both soil and plant δ15N. However, the warming effect on soil δ15N was positively controlled by the mean annual temperature, which is related to the fact that the higher temperature can strengthen the activity of soil microbes. The effect of warming on plant δ15N had weaker relationships with environmental variables compared with that on soil δ15N. This implied that soil δ15N was more effective than plant δ15N in indicating the openness of global ecosystem N cycling.

Estimation of soil properties with mid-infrared soil spectroscopy across yam production landscapes in West Africa

Low soil fertility is challenging the sustainable production of yam and other staple crops in the yam belt of West Africa. Quantitative soil measures are needed to assess soil fertility decline and to improve crop nutrient supply in the region. We developed and tested a mid-infrared (mid-IR) soil spectral library to enable timely and cost-efficient assessments of soil properties. Our collection included 80 soil samples from four landscapes (10 km × 10 km) and 20 fields per landscape across a gradient from humid forest to savannah and 14 additional samples from one landscape that had been sampled within the Land Health Degradation Framework. We derived partial least squares regression models to spectrally estimate soil properties. The models produced accurate cross-validated estimates of total carbon, total nitrogen, total sulfur, total iron, total aluminum, total potassium, total calcium, exchangeable calcium, effective cation exchange capacity, and diethylenetriaminepentaacetic acid (DTPA)-extractable iron and clay content (R2>0.75). The estimates of total zinc, pH, exchangeable magnesium, bioavailable copper, and manganese were less predictable (R2>0.50). Our results confirm that mid-IR spectroscopy is a reliable and quick method to assess the regional-level variation of most soil properties, especially the ones closely associated with soil organic matter. Although the relatively small mid-IR library shows satisfactory performance, we expect that frequent but small model updates will be needed to adapt the library to the variation of soil quality within individual fields in the regions and their temporal fluctuations.

The central African soil spectral library: a new soil infrared repository and a geographical prediction analysis

Information on soil properties is crucial for soil preservation, the improvement of food security, and the provision of ecosystem services. In particular, for the African continent, spatially explicit information on soils and their ability to sustain these services is still scarce. To address data gaps, infrared spectroscopy has achieved great success as a cost-effective solution to quantify soil properties in recent decades. Here, we present a mid-infrared soil spectral library (SSL) for central Africa (CSSL) that can predict key soil properties, allowing for future soil estimates with a minimal need for expensive and time-consuming wet chemistry. Currently, our CSSL contains over 1800 soil samples from 10 distinct geoclimatic regions throughout the Congo Basin and along the Albertine Rift. For the analysis, we selected six regions from the CSSL, for which we built predictive models for total carbon (TC) and total nitrogen (TN) using an existing continental SSL (African Soil Information Service, AfSIS SSL; n=1902) that does not include central African soils. Using memory-based learning (MBL), we explored three different strategies at decreasing degrees of geographic extrapolation, using models built with (1) the AfSIS SSL only, (2) AfSIS SSL combined with the five remaining central African regions, and (3) a combination of AfSIS SSL, the remaining five regions, and selected samples from the target region (spiking). For this last strategy we introduce a method for spiking MBL models. We found that when using the AfSIS SSL only to predict the six central African regions, the root mean square error of the predictions (RMSEpred) was between 3.85–8.74 and 0.40–1.66 g kg−1 for TC and TN, respectively. The ratio of performance to the interquartile distance (RPIQpred) ranged between 0.96–3.95 for TC and 0.59–2.86 for TN. While the effect of the second strategy compared to the first strategy was mixed, the third strategy, spiking with samples from the target regions, could clearly reduce the RMSEpred to 3.19–7.32 g kg−1 for TC and 0.24–0.89 g kg−1 for TN. RPIQpred values were increased to ranges of 1.43–5.48 and 1.62–4.45 for TC and TN, respectively. In general, predicted TC and TN for soils of each of the six regions were accurate; the effect of spiking and avoiding geographical extrapolation was noticeably large. We conclude that our CSSL adds valuable soil diversity that can improve predictions for the Congo Basin region compared to using the continental AfSIS SSL alone; thus, analyses of other soils in central Africa will be able to profit from a more diverse spectral feature space. Given these promising results, the library comprises an important tool to facilitate economical soil analyses and predict soil properties in an understudied yet critical region of Africa. Our SSL is openly available for application and for enlargement with more spectral and reference data to further improve soil diagnostic accuracy and cost-effectiveness.

Effects of environmental factors and soil properties on soil organic carbon stock in a natural dry tropical area of Cameroon

Research carried out on soil organic carbon stock (SOCS) in the Sudano-Sahelian region of Cameroon is very rare. The few existing studies are mostly available in reports and concern in most cases carbon stocks in plant biomass. In order to contribute to the documentation on soils in this part of the country, the present work was designed to evaluate the SOCS in the main soil types and the influence of environmental factors and soil properties on these stocks under the natural dry tropical area of the Sudano-Sahelian zone of Cameroon. The study was undertaken in four sites, including three natural forest reserves (Laf, Zamai, Kosohon) and one national park (Mozogo), located at different latitudes. Three replicates were collected at each site, giving rise to three sampling points chosen per site, from 0 to 75 cm depth, for the determination of SOCS. At each sampling point, soils were sampled using depth increments of 25 cm from the surface. The studied area is covered by Haplic Vertisols, Dystric Arenosols, Dystric Leptosols and Dystric Planosols. Total SOCS (T-SOCS) content, which refers to a depth of 75 cm, decreases with increasing latitude, with 249±26.26 Mg ha−1 in Vertisols at Laf forest reserve most southerly located, 199±8.00 Mg ha−1 in Arenosols at Zamai forest reserve, 166±16.63 Mg ha−1 in Leptosols at Kosohon forest reserve and 161±8.88 Mg ha−1 in Planosols at Mozogo national park most northerly located, regardless of the altitude. No significant correlation was noted between T-SOCS and the altitude. A good correlation was noted between precipitation which decreases with increasing latitude and T-SOCS, indicating the importance of climate in the distribution of T-SOCS in the study area, which directly influences the productivity of the vegetation. More than 60 % of the SOCS was stored below the first 25 cm from the soil surface, a peculiarity of SOCS in drylands. The SOCS in the Sudano-Sahelian area of Cameroon is mainly influenced by climate and vegetation.

The effects of sealing on urban soil carbon and nutrients

Urban soils are of increasing interest for their potential to provide ecosystem services such as carbon storage and nutrient cycling. Despite this, there is limited knowledge on how soil sealing with impervious surfaces, a common disturbance in urban environments, affects these important ecosystem services. In this paper, we investigate the effect of soil sealing on soil properties, soil carbon and soil nutrient stocks. We undertook a comparative survey of sealed and unsealed green space soils across the UK city of Manchester. Our results reveal that the context of urban soil and the anthropogenic artefacts added to soil have a great influence on soil properties and functions. In general, sealing reduced soil carbon and nutrient stocks compared to green space soil; however, where there were anthropogenic additions of organic and mineral artefacts, this led to increases in soil carbon and nitrate content. Anthropogenic additions led to carbon stocks equivalent to or larger than those in green spaces; this was likely a result of charcoal additions, leading to carbon stores with long residence times. This suggests that in areas with an industrial past, anthropogenic additions can lead to a legacy carbon store in urban soil and make important contributions to urban soil carbon budgets. These findings shed light on the heterogeneity of urban sealed soil and the influence of anthropogenic artefacts on soil functions. Our research highlights the need to gain a further understanding of urban soil processes, in both sealed and unsealed soils, and of the influence and legacy of anthropogenic additions for soil functions and important ecosystem services.