scholarly journals Characterizing Seedling Stands Using Leaf-Off and Leaf-On Photogrammetric Point Clouds and Hyperspectral Imagery Acquired from Unmanned Aerial Vehicle

Forests ◽  
2019 ◽  
Vol 10 (5) ◽  
pp. 415 ◽  
Author(s):  
Mohammad Imangholiloo ◽  
Ninni Saarinen ◽  
Lauri Markelin ◽  
Tomi Rosnell ◽  
Roope Näsi ◽  
...  
Keyword(s):  
Laser Scanning ◽  
Hyperspectral Imagery ◽  
Digital Terrain Model ◽  
Tree Height ◽  
Point Clouds ◽  
Tree Density ◽  
Tree Canopy ◽  
Tree Level ◽  
Species Classification ◽  
Individual Tree

Seedling stands are mainly inventoried through field measurements, which are typically laborious, expensive and time-consuming due to high tree density and small tree size. In addition, operationally used sparse density airborne laser scanning (ALS) and aerial imagery data are not sufficiently accurate for inventorying seedling stands. The use of unmanned aerial vehicles (UAVs) for forestry applications is currently in high attention and in the midst of quick development and this technology could be used to make seedling stand management more efficient. This study was designed to investigate the use of UAV-based photogrammetric point clouds and hyperspectral imagery for characterizing seedling stands in leaf-off and leaf-on conditions. The focus was in retrieving tree density and the height in young seedling stands in the southern boreal forests of Finland. After creating the canopy height model from photogrammetric point clouds using national digital terrain model based on ALS, the watershed segmentation method was applied to delineate the tree canopy boundary at individual tree level. The segments were then used to extract tree heights and spectral information. Optimal bands for calculating vegetation indices were analysed and used for species classification using the random forest method. Tree density and the mean tree height of the total and spruce trees were then estimated at the plot level. The overall tree density was underestimated by 17.5% and 20.2% in leaf-off and leaf-on conditions with the relative root mean square error (relative RMSE) of 33.5% and 26.8%, respectively. Mean tree height was underestimated by 20.8% and 7.4% (relative RMSE of 23.0% and 11.5%, and RMSE of 0.57 m and 0.29 m) in leaf-off and leaf-on conditions, respectively. The leaf-on data outperformed the leaf-off data in the estimations. The results showed that UAV imagery hold potential for reliably characterizing seedling stands and to be used to supplement or replace the laborious field inventory methods.

scholarly journals Airborne laser scanning applied to eucalyptus stand inventory at individual tree level

2018 ◽  
Vol 53 (12) ◽  
pp. 1373-1382 ◽  
Author(s):  
Diogo Nepomuceno Cosenza ◽  
Vicente Paulo Soares ◽  
Helio Garcia Leite ◽  
José Marinaldo Gleriani ◽  
Cibele Hummel do Amaral ◽  
...  
Keyword(s):  
Laser Scanning ◽  
Large Scale ◽  
Tree Height ◽  
Point Clouds ◽  
Equation System ◽  
Airborne Laser Scanning ◽  
Tree Level ◽  
Individual Tree ◽  
Local Maxima ◽  
Airborne Laser

Abstract: The objective of this work was to evaluate the application of airborne laser scanning (ALS) to a large-scale eucalyptus stand inventory by the method of individual trees, as well as to propose a new method to estimate tree diameter as a function of the height obtained from point clouds. The study was carried out in a forest area of 1,681 ha, consisting of eight eucalyptus stands with ages varying from four to seven years. After scanning, tree heights were obtained using the local maxima algorithm, and total wood stock by summing up individual volumes. To determine tree diameters, regressions fit using data measured in the inventory plots were used. The results were compared with the estimates obtained from field sampling. The equation system proposed is adequate to be applied to the tree height data derived from ALS point clouds. The tree individualization approach by local maxima filters is efficient to estimate number of trees and wood stock from ALS data, as long as the results are previously calibrated with field data.

scholarly journals Predicting Growing Stock Volume of Eucalyptus Plantations Using 3-D Point Clouds Derived from UAV Imagery and ALS Data

Forests ◽  
2019 ◽  
Vol 10 (10) ◽  
pp. 905 ◽  
Author(s):  
Guerra-Hernández ◽  
Cosenza ◽  
Cardil ◽  
Silva ◽  
Botequim ◽  
...  
Keyword(s):  
Laser Scanning ◽  
Basal Area ◽  
Remote Sensing Data ◽  
Tree Height ◽  
Point Clouds ◽  
Volume Estimation ◽  
P Value ◽  
Test Statistic ◽  
Individual Tree ◽  
Significant Difference

Estimating forest inventory variables is important in monitoring forest resources and mitigating climate change. In this respect, forest managers require flexible, non-destructive methods for estimating volume and biomass. High-resolution and low-cost remote sensing data are increasingly available to measure three-dimensional (3D) canopy structure and to model forest structural attributes. The main objective of this study was to evaluate and compare the individual tree volume estimates derived from high-density point clouds obtained from airborne laser scanning (ALS) and digital aerial photogrammetry (DAP) in Eucalyptus spp. plantations. Object-based image analysis (OBIA) techniques were applied for individual tree crown (ITC) delineation. The ITC algorithm applied correctly detected and delineated 199 trees from ALS-derived data, while 192 trees were correctly identified using DAP-based point clouds acquired from Unmanned Aerial Vehicles (UAV), representing accuracy levels of respectively 62% and 60%. Addressing volume modelling, non-linear regression fit based on individual tree height and individual crown area derived from the ITC provided the following results: Model Efficiency (Mef) = 0.43 and 0.46, Root Mean Square Error (RMSE) = 0.030 m3 and 0.026 m3, rRMSE = 20.31% and 19.97%, and an approximately unbiased results (0.025 m3 and 0.0004 m3) using DAP and ALS-based estimations, respectively. No significant difference was found between the observed value (field data) and volume estimation from ALS and DAP (p-value from t-test statistic = 0.99 and 0.98, respectively). The proposed approaches could also be used to estimate basal area or biomass stocks in Eucalyptus spp. plantations.

Individual Tree Measurement in Tropical Environment using Terrestrial Laser Scanning

2015 ◽  
Vol 73 (5) ◽  
Author(s):  
Muhammad Zulkarnain Abdul Rahman ◽  
Zulkepli Majid ◽  
Md Afif Abu Bakar ◽  
Abd Wahid Rasib ◽  
Wan Hazli Wan Kadir
Keyword(s):  
Laser Scanning ◽  
Mean Squared Error ◽  
Tree Height ◽  
Point Clouds ◽  
Tree Crown ◽  
Individual Tree ◽  
Branch Diameter ◽  
Reference Tree ◽  
Crown Volume ◽  
Tree Branch

Detailed forest inventory and mensuration of individual trees have drawn attention of research society mainly to support sustainable forest management. This study aims at estimating individual tree attributes from high density point cloud obtained by terrestrial laser scanner (TLS). The point clouds were obtained over single reference tree and group of trees in forest area. The reference tree is treated as benchmark since detailed measurements of branch diameter were made on selected branches with different sizes and locations. Diameter at breast height (DBH) was measured for trees in forest. Furthermore tree height, height to crown base, crown volume and tree branch volume were also estimated for each tree. Branch diameter is estimated directly from the point clouds based on semi-automatic approach of model fitting i.e. sphere, ellipse and cylinder. Tree branch volume is estimated based on the volume of the fitted models. Tree height and height to crown base are computed using histogram analysis of the point clouds elevation. Tree crown volume is estimated by fitting a convex-hull on the tree crown. The results show that the Root Mean Squared Error (RMSE) of the estimated tree branch diameter does not have a specific trend with branch sizes and number of points used for fitting process. This explains complicated distribution of point clouds over the branches. Overall cylinder model produces good results with most branch sizes and number of point clouds for fitting. The cylinder fitting approach shows significantly better estimation results compared to sphere and ellipse fitting models.   

scholarly journals Individual tree extraction from terrestrial laser scanning data via graph pathing

2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Di Wang ◽  
Xinlian Liang ◽  
Gislain II Mofack ◽  
Olivier Martin-Ducup
Keyword(s):  
Laser Scanning ◽  
Terrestrial Laser Scanning ◽  
Point Clouds ◽  
Tree Level ◽  
Forest Types ◽  
Computationally Efficient ◽  
Large Area ◽  
Individual Tree ◽  
Single Crown ◽  
Tree Extraction

Abstract Background Individual tree extraction from terrestrial laser scanning (TLS) data is a prerequisite for tree-scale estimations of forest biophysical properties. This task currently is undertaken through laborious and time-consuming manual assistance and quality control. This study presents a new fully automatic approach to extract single trees from large-area TLS data. This data-driven method operates exclusively on a point cloud graph by path finding, which makes our method computationally efficient and universally applicable to data from various forest types. Results We demonstrated the proposed method on two openly available datasets. First, we achieved state-of-the-art performance on locating single trees on a benchmark dataset by significantly improving the mean accuracy by over 10% especially for difficult forest plots. Second, we successfully extracted 270 trees from one hectare temperate forest. Quantitative validation resulted in a mean Intersection over Union (mIoU) of 0.82 for single crown segmentation, which further led to a relative root mean square error (RMSE%) of 21.2% and 23.5% for crown area and tree volume estimations, respectively. Conclusions Our method allows automated access to individual tree level information from TLS point clouds. The proposed method is free from restricted assumptions of forest types. It is also computationally efficient with an average processing time of several seconds for one million points. It is expected and hoped that our method would contribute to TLS-enabled wide-area forest qualifications, ranging from stand volume and carbon stocks modelling to derivation of tree functional traits as part of the global ecosystem understanding.

scholarly journals EVALUATING THE POSSIBILITY OF TREE SPECIES CLASSIFICATION WITH DUAL-WAVELENGTH ALS DATA

2019 ◽  
Vol XLII-2/W13 ◽  
pp. 1097-1103
Author(s):  
M. Pilarska ◽  
W. Ostrowski
Keyword(s):  
Spatial Data ◽  
Tree Species ◽  
Laser Scanning ◽  
Laser Scanner ◽  
Point Clouds ◽  
Airborne Laser Scanning ◽  
Tree Canopy ◽  
Species Classification ◽  
Airborne Laser ◽  
Simultaneous Acquisition

<p><strong>Abstract.</strong> Airborne laser scanning (ALS) plays an important role in spatial data acquisition. One of the advantages of this technique is laser beam penetration through vegetation, which makes it possible to not only obtain data on the tree canopy but also within and under the canopy. In recent years, multi-wavelength airborne laser scanning has been developed. This technique consists of simultaneous acquisition of point clouds in more than one band. The aim of this experiment was to examine and assess the possibilities of tree segmentation and species classification in an urban area. In this experiment, point clouds registered in two wavelengths (532 and 1064&amp;thinsp;nm) were used for tree segmentation and species classification. The data were acquired with a Riegl VQ-1560i-DW laser scanner over Elblag, Poland, during August 2018. Tree species collected by a botanist team within terrain measurements were used as a reference in the classification process. Within the experiment segmentation and classification process were performed. Regarding the segmentation, TerraScan software and Li et al.’s algorithm, implemented in LidR package were used. Results from both methods are clearly over-segmented in comparison to the manual segments. In Terrasolid segmentation, single reference segments are over-segmented in 28% of cases, whereas, for LidR, over-segmentation occurred in 73% of the segments. According the classification results, Thuja, Salix and Betula were the species, for which the highest classification accuracy was achieved.</p>

scholarly journals Exploring the Variability of Tropical Savanna Tree Structural Allometry with Terrestrial Laser Scanning

2020 ◽  
Vol 12 (23) ◽  
pp. 3893
Author(s):  
Linda Luck ◽  
Lindsay B. Hutley ◽  
Kim Calders ◽  
Shaun R. Levick
Keyword(s):  
Laser Scanning ◽  
3D Structure ◽  
Terrestrial Laser Scanning ◽  
Tree Height ◽  
Tree Architecture ◽  
Allometric Equations ◽  
Environmental Research ◽  
Tree Level ◽  
Individual Tree ◽  
Monitoring Programs

Individual tree carbon stock estimates typically rely on allometric scaling relationships established between field-measured stem diameter (DBH) and destructively harvested biomass. The use of DBH-based allometric equations to estimate the carbon stored over larger areas therefore, assumes that tree architecture, including branching and crown structures, are consistent for a given DBH, and that minor variations cancel out at the plot scale. We aimed to explore the degree of structural variation present at the individual tree level across a range of size-classes. We used terrestrial laser scanning (TLS) to measure the 3D structure of each tree in a 1 ha savanna plot, with coincident field-inventory. We found that stem reconstructions from TLS captured both the spatial distribution pattern and the DBH of individual trees with high confidence when compared with manual measurements (R2 = 0.98, RMSE = 0.0102 m). Our exploration of the relationship between DBH, crown size and tree height revealed significant variability in savanna tree crown structure (measured as crown area). These findings question the reliability of DBH-based allometric equations for adequately representing diversity in tree architecture, and therefore carbon storage, in tropical savannas. However, adoption of TLS outside environmental research has been slow due to considerable capital cost and monitoring programs often continue to rely on sub-plot monitoring and traditional allometric equations. A central aspect of our study explores the utility of a lower-cost TLS system not generally used for vegetation surveys. We discuss the potential benefits of alternative TLS-based approaches, such as explicit modelling of tree structure or voxel-based analyses, to capture the diverse 3D structures of savanna trees. Our research highlights structural heterogeneity as a source of uncertainty in savanna tree carbon estimates and demonstrates the potential for greater inclusion of cost-effective TLS technology in national monitoring programs.

scholarly journals Handheld Laser Scanning Detects Spatiotemporal Differences in the Development of Structural Traits among Species in Restoration Plantings

2021 ◽  
Vol 13 (9) ◽  
pp. 1706
Author(s):  
Nicolò Camarretta ◽  
Peter A. Harrison ◽  
Arko Lucieer ◽  
Brad M. Potts ◽  
Neil Davidson ◽  
...  
Keyword(s):  
Ecological Restoration ◽  
Laser Scanning ◽  
Tree Height ◽  
Point Clouds ◽  
Species Interaction ◽  
Ecosystem Functions ◽  
Tree Level ◽  
Base Line ◽  
Sensing Technology ◽  
Structural Traits

A major challenge in ecological restoration is assessing the success of restoration plantings in producing habitats that provide the desired ecosystem functions and services. Forest structural complexity and biomass accumulation are key measures used to monitor restoration success and are important factors determining animal habitat availability and carbon sequestration. Monitoring their development through time using traditional field measurements can be costly and impractical, particularly at the landscape-scale, which is a common requirement in ecological restoration. We explored the application of proximal sensing technology as an alternative to traditional field surveys to capture the development of key forest structural traits in a restoration planting in the Midlands of Tasmania, Australia. We report the use of a hand-held laser scanner (ZEB1) to measure annual changes in structural traits at the tree-level, in a mixed species common-garden experiment from seven- to nine-years after planting. Using very dense point clouds, we derived estimates of multiple structural traits, including above ground biomass, tree height, stem diameter, crown dimensions, and crown properties. We detected annual increases in most LiDAR-derived traits, with individual crowns becoming increasingly interconnected. Time by species interaction were detected, and were associated with differences in productivity between species. We show the potential for remote sensing technology to monitor temporal changes in forest structural traits, as well as to provide base-line measures from which to assess the restoration trajectory towards a desired state.

scholarly journals Examining the Multi-Seasonal Consistency of Individual Tree Segmentation on Deciduous Stands Using Digital Aerial Photogrammetry (DAP) and Unmanned Aerial Systems (UAS)

2019 ◽  
Vol 11 (7) ◽  
pp. 739 ◽  
Author(s):  
Rik Nuijten ◽  
Nicholas Coops ◽  
Tristan Goodbody ◽  
Gaetan Pelletier
Keyword(s):  
Laser Scanning ◽  
Digital Terrain Model ◽  
Point Clouds ◽  
Forest Monitoring ◽  
Forest Damage ◽  
Deciduous Tree ◽  
Unmanned Aerial Systems ◽  
Commission Error ◽  
Individual Tree ◽  
Over Time

Digital aerial photogrammetric (DAP) techniques applied to unmanned aerial system (UAS) acquired imagery have the potential to offer timely and affordable data for monitoring and updating forest inventories. Development of methods for individual tree crown detection (ITCD) and delineation enables the development of individual tree-based, rather than stand based inventories, which are important for harvesting operations, biomass and carbon stock estimations, forest damage assessment, and forest monitoring in mixed species stands. To achieve these inventory goals, consistent and robust DAP estimates are required over time. Currently, the influence of seasonal changes in deciduous tree structure on the consistency of DAP point clouds, from which tree-based inventories can be derived, is unknown. In this study, we investigate the influence of the timing of DAP acquisition on ITCD accuracies and estimation of tree attributes for a deciduous-dominated forest stand in New Brunswick, Canada. UAS imagery was acquired five times between June and September 2017 over the same stand and consistently processed into DAP point clouds. Airborne laser scanning (ALS) data, acquired the same year, was used to reconstruct a digital terrain model (DTM) and served as a reference for UAS-DAP-based ITCD. Marker-controlled watershed segmentation (MCWS) was used to delineate individual tree crowns. Accuracy index percentages between 55% (July 25) and 77.1% (September 22) were achieved. Omission errors were found to be relatively high for the first three DAP acquisitions (June 7, July 5, and July 25) and decreased gradually thereafter. The commission error was relatively high on July 25. Point cloud metrics were found to be predominantly consistent over the 4-month period, however, estimated tree heights gradually decreased over time, suggesting a trade-off between ITCD accuracies and measured tree heights. Our findings provide insight into the potential influence of seasonality on DAP-ITCD approaches to derive individual tree inventories.

scholarly journals Development and Performance Evaluation of a Very Low-Cost UAV-Lidar System for Forestry Applications

2020 ◽  
Vol 13 (1) ◽  
pp. 77
Author(s):  
Tianyu Hu ◽  
Xiliang Sun ◽  
Yanjun Su ◽  
Hongcan Guan ◽  
Qianhui Sun ◽  
...  
Keyword(s):  
Forest Inventory ◽  
Low Cost ◽  
Canopy Cover ◽  
Tree Height ◽  
Flying Height ◽  
Tree Level ◽  
Forest Site ◽  
Lidar System ◽  
Individual Tree ◽  
Gap Fraction

Accurate and repeated forest inventory data are critical to understand forest ecosystem processes and manage forest resources. In recent years, unmanned aerial vehicle (UAV)-borne light detection and ranging (lidar) systems have demonstrated effectiveness at deriving forest inventory attributes. However, their high cost has largely prevented them from being used in large-scale forest applications. Here, we developed a very low-cost UAV lidar system that integrates a recently emerged DJI Livox MID40 laser scanner (~$600 USD) and evaluated its capability in estimating both individual tree-level (i.e., tree height) and plot-level forest inventory attributes (i.e., canopy cover, gap fraction, and leaf area index (LAI)). Moreover, a comprehensive comparison was conducted between the developed DJI Livox system and four other UAV lidar systems equipped with high-end laser scanners (i.e., RIEGL VUX-1 UAV, RIEGL miniVUX-1 UAV, HESAI Pandar40, and Velodyne Puck LITE). Using these instruments, we surveyed a coniferous forest site and a broadleaved forest site, with tree densities ranging from 500 trees/ha to 3000 trees/ha, with 52 UAV flights at different flying height and speed combinations. The developed DJI Livox MID40 system effectively captured the upper canopy structure and terrain surface information at both forest sites. The estimated individual tree height was highly correlated with field measurements (coniferous site: R2 = 0.96, root mean squared error/RMSE = 0.59 m; broadleaved site: R2 = 0.70, RMSE = 1.63 m). The plot-level estimates of canopy cover, gap fraction, and LAI corresponded well with those derived from the high-end RIEGL VUX-1 UAV system but tended to have systematic biases in areas with medium to high canopy densities. Overall, the DJI Livox MID40 system performed comparably to the RIEGL miniVUX-1 UAV, HESAI Pandar40, and Velodyne Puck LITE systems in the coniferous site and to the Velodyne Puck LITE system in the broadleaved forest. Despite its apparent weaknesses of limited sensitivity to low-intensity returns and narrow field of view, we believe that the very low-cost system developed by this study can largely broaden the potential use of UAV lidar in forest inventory applications. This study also provides guidance for the selection of the appropriate UAV lidar system and flight specifications for forest research and management.

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