scholarly journals A Genetic Assessment of Parentage in the Blackspot Sergeant Damselfish, Abudefduf sordidus (Pisces: Pomacentridae)

Fishes ◽  
2019 ◽  
Vol 4 (4) ◽  
pp. 53
Author(s):  
Lisa Kerr Lobel ◽  
Devin M. Drown ◽  
Paul H. Barber ◽  
Phillip S. Lobel

Microsatellite markers were used to investigate the reproductive behavior of the damselfish Abudefduf sordidus at Johnston Atoll, Central Pacific Ocean. Genetic results indicated that ten males maintained guardianship over their nest territories for up to nine nest cycles during a 3.5 month period. Genotypes of 1025 offspring sampled from 68 nests (composed of 129 clutches) were consistent with 95% of the offspring being sired by the guardian male. Offspring lacking paternal alleles at two or more loci were found in 19 clutches, indicating that reproductive parasitism and subsequent alloparental care occurred. Reconstructed maternal genotypes allowed the identification of a minimum of 74 different females that spawned with these ten territorial males. Males were polygynous, mating with multiple females within and between cycles. Genetic data from nests, which consisted of up to four clutches during a reproductive cycle, indicated that each clutch usually had only one maternal contributor and that different clutches each had different dams. Females displayed sequential polyandry spawning with one male within a cycle but switched males in subsequent spawning cycles. These results highlight new findings regarding male parasitic spawning, polygyny, and sequential polyandry in a marine fish with exclusive male paternal care.

ZooKeys ◽  
2019 ◽  
Vol 883 ◽  
pp. 1-82 ◽  
Author(s):  
Helena Wiklund ◽  
Lenka Neal ◽  
Adrian G. Glover ◽  
Regan Drennan ◽  
Muriel Rabone ◽  
...  

We present DNA taxonomy of abyssal polychaete worms from the eastern Clarion-Clipperton Zone (CCZ), central Pacific Ocean, using material collected as part of the Abyssal Baseline (ABYSSLINE) environmental survey cruises ‘AB01’ and ‘AB02’ to the UK Seabed Resources Ltd (UKSRL) polymetallic nodule exploration contract area ‘UK-1’, the Ocean Mineral Singapore exploration contract area ‘OMS-1’ and an Area of Particular Environmental Interest, ‘APEI-6’. This is the fourth paper in a series to provide regional taxonomic data with previous papers reporting on Cnidaria, Echinodermata and Mollusca. Taxonomic data are presented for 23 species from 85 records within four polychaete families: Capitellidae, Opheliidae, Scalibregmatidae and Travisiidae, identified by a combination of morphological and genetic data, including molecular phylogenetic analyses. Two taxa (genetically separated from one another) morphologically matched the same known cosmopolitan species,Ophelina abranchiatathat has a type locality in a different ocean basin and depth from where no genetic data was available. These two species were assigned the open nomenclature ‘cf.’ as a precautionary approach in taxon assignments to avoid over-estimating species ranges. Twelve (12) taxa are here described as new species,Ammotrypanella keenanisp. nov.,Ammotrypanella kerstenisp. nov.,Ophelina curlisp. nov.,Ophelina ganaesp. nov.,Ophelina juhazisp. nov.,Ophelina martinezarbizuisp. nov.,Ophelina meyeraesp. nov.,Ophelina nunnallyisp. nov.,Oligobregma brasieraesp. nov.,Oligobregma tanisp. nov.,Oligobregma whaleyisp. nov.andTravisia ziegleraesp. nov.For the remaining nine taxa, we have determined them to be potentially new species, for which we make the raw data, imagery and vouchers available for future taxonomic study. The CCZ is a region undergoing intense exploration for potential deep-sea mineral extraction from polymetallic nodules. We present these data to facilitate future taxonomic and environmental impact study by making both data and voucher materials available through curated and accessible biological collections.


Archaea ◽  
2019 ◽  
Vol 2019 ◽  
pp. 1-12 ◽  
Author(s):  
Franziska Wemheuer ◽  
Avril Jean Elisabeth von Hoyningen-Huene ◽  
Marion Pohlner ◽  
Julius Degenhardt ◽  
Bert Engelen ◽  
...  

Information on environmental conditions shaping archaeal communities thriving at the seafloor of the central Pacific Ocean is limited. The present study was conducted to investigate the diversity, composition, and function of both entire and potentially active archaeal communities within Pacific deep-sea sediments. For this purpose, sediment samples were taken along the 180° meridian of the central Pacific Ocean. Community composition and diversity were assessed by Illumina tag sequencing targeting archaeal 16S rRNA genes and transcripts. Archaeal communities were dominated by CandidatusNitrosopumilus(Thaumarchaeota) and other members of theNitrosopumilaceae(Thaumarchaeota), but higher relative abundances of the Marine Group II (Euryarchaeota) were observed in the active compared to the entire archaeal community. The composition of the entire and the active archaeal communities was strongly linked to primary production (chlorophyll content), explaining more than 40% of the variance. Furthermore, we found a strong correlation of the entire archaeal community composition to latitude and silicic acid content, while the active community was significantly correlated with primary production and ferric oxide content. We predicted functional profiles from 16S rRNA data to assess archaeal community functions. Latitude was significantly correlated with functional profiles of the entire community, whereas those of the active community were significantly correlated with nitrate and chlorophyll content. The results of the present study provide first insights into benthic archaeal communities in the Pacific Ocean and environmental conditions shaping their diversity, distribution, and function. Additionally, they might serve as a template for further studies investigating archaea colonizing deep-sea sediments.


The Condor ◽  
1925 ◽  
Vol 27 (5) ◽  
pp. 185-196 ◽  
Author(s):  
Harold Kirby,

2017 ◽  
Vol 17 (14) ◽  
pp. 9081-9102 ◽  
Author(s):  
Michael J. Prather ◽  
Xin Zhu ◽  
Clare M. Flynn ◽  
Sarah A. Strode ◽  
Jose M. Rodriguez ◽  
...  

Abstract. An approach for analysis and modeling of global atmospheric chemistry is developed for application to measurements that provide a tropospheric climatology of those heterogeneously distributed, reactive species that control the loss of methane and the production and loss of ozone. We identify key species (e.g., O3, NOx, HNO3, HNO4, C2H3NO5, H2O, HOOH, CH3OOH, HCHO, CO, CH4, C2H6, acetaldehyde, acetone) and presume that they can be measured simultaneously in air parcels on the scale of a few km horizontally and a few tenths of a km vertically. As a first step, six global models have prepared such climatologies sampled at the modeled resolution for August with emphasis on the vast central Pacific Ocean basin. Objectives of this paper are to identify and characterize differences in model-generated reactivities as well as species covariances that could readily be discriminated with an unbiased climatology. A primary tool is comparison of multidimensional probability densities of key species weighted by the mass of such parcels or frequency of occurrence as well as by the reactivity of the parcels with respect to methane and ozone. The reactivity-weighted probabilities tell us which parcels matter in this case, and this method shows skill in differentiating among the models' chemistry. Testing 100 km scale models with 2 km measurements using these tools also addresses a core question about model resolution and whether fine-scale atmospheric structures matter to the overall ozone and methane budget. A new method enabling these six global chemistry–climate models to ingest an externally sourced climatology and then compute air parcel reactivity is demonstrated. Such an objective climatology containing these key species is anticipated from the NASA Atmospheric Tomography (ATom) aircraft mission (2015–2020), executing profiles over the Pacific and Atlantic Ocean basins. This modeling study addresses a core part of the design of ATom.


2016 ◽  
Vol 73 (5) ◽  
pp. 2147-2163 ◽  
Author(s):  
Juliana Dias ◽  
George N. Kiladis

Abstract Space–time spectral analysis of tropical cloudiness data shows strong evidence that convectively coupled n = 0 mixed Rossby–gravity waves (MRGs) and eastward inertio-gravity waves (EIGs) occur primarily within the western/central Pacific Ocean. Spectral filtering also shows that MRG and EIG cloudiness patterns are antisymmetric with respect to the equator, and they propagate coherently toward the west and east, respectively, with periods between 3 and 5 days, in agreement with Matsuno’s linear shallow-water theory. In contrast to the spectral approach, in a companion paper it has been shown that empirical orthogonal functions (EOFs) of 2–6-day-filtered cloudiness data within the tropical Pacific Ocean also suggest an antisymmetric pattern, but with the leading EOFs implying a zonally standing but poleward-propagating oscillation, along with the associated tropospheric flow moving to the west. In the present paper, these two views are reconciled by applying an independent approach based on a tracking method to assess tropical convection organization. It is shown that, on average, two-thirds of MRG and EIG events develop independently of one another, and one-third of the events overlap in space and time. This analysis also verifies that MRG and EIG cloudiness fields tend to propagate meridionally away from the equator. It is demonstrated that the lack of zonal propagation implied from the EOF analysis is likely due to the interference between eastward- and westward-propagating disturbances. In addition, it is shown that the westward-propagating circulation associated with the leading EOF is consistent with the expected theoretical behavior of an interference between MRGs and EIGs.


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