scholarly journals Phybrata Sensors and Machine Learning for Enhanced Neurophysiological Diagnosis and Treatment

Sensors ◽  
2021 ◽  
Vol 21 (21) ◽  
pp. 7417
Author(s):  
Alex J. Hope ◽  
Utkarsh Vashisth ◽  
Matthew J. Parker ◽  
Andreas B. Ralston ◽  
Joshua M. Roper ◽  
...  

Concussion injuries remain a significant public health challenge. A significant unmet clinical need remains for tools that allow related physiological impairments and longer-term health risks to be identified earlier, better quantified, and more easily monitored over time. We address this challenge by combining a head-mounted wearable inertial motion unit (IMU)-based physiological vibration acceleration (“phybrata”) sensor and several candidate machine learning (ML) models. The performance of this solution is assessed for both binary classification of concussion patients and multiclass predictions of specific concussion-related neurophysiological impairments. Results are compared with previously reported approaches to ML-based concussion diagnostics. Using phybrata data from a previously reported concussion study population, four different machine learning models (Support Vector Machine, Random Forest Classifier, Extreme Gradient Boost, and Convolutional Neural Network) are first investigated for binary classification of the test population as healthy vs. concussion (Use Case 1). Results are compared for two different data preprocessing pipelines, Time-Series Averaging (TSA) and Non-Time-Series Feature Extraction (NTS). Next, the three best-performing NTS models are compared in terms of their multiclass prediction performance for specific concussion-related impairments: vestibular, neurological, both (Use Case 2). For Use Case 1, the NTS model approach outperformed the TSA approach, with the two best algorithms achieving an F1 score of 0.94. For Use Case 2, the NTS Random Forest model achieved the best performance in the testing set, with an F1 score of 0.90, and identified a wider range of relevant phybrata signal features that contributed to impairment classification compared with manual feature inspection and statistical data analysis. The overall classification performance achieved in the present work exceeds previously reported approaches to ML-based concussion diagnostics using other data sources and ML models. This study also demonstrates the first combination of a wearable IMU-based sensor and ML model that enables both binary classification of concussion patients and multiclass predictions of specific concussion-related neurophysiological impairments.

Sensors ◽  
2021 ◽  
Vol 21 (17) ◽  
pp. 5896
Author(s):  
Eddi Miller ◽  
Vladyslav Borysenko ◽  
Moritz Heusinger ◽  
Niklas Niedner ◽  
Bastian Engelmann ◽  
...  

Changeover times are an important element when evaluating the Overall Equipment Effectiveness (OEE) of a production machine. The article presents a machine learning (ML) approach that is based on an external sensor setup to automatically detect changeovers in a shopfloor environment. The door statuses, coolant flow, power consumption, and operator indoor GPS data of a milling machine were used in the ML approach. As ML methods, Decision Trees, Support Vector Machines, (Balanced) Random Forest algorithms, and Neural Networks were chosen, and their performance was compared. The best results were achieved with the Random Forest ML model (97% F1 score, 99.72% AUC score). It was also carried out that model performance is optimal when only a binary classification of a changeover phase and a production phase is considered and less subphases of the changeover process are applied.


Author(s):  
Shweta Dabetwar ◽  
Stephen Ekwaro-Osire ◽  
João Paulo Dias

Abstract Composite materials have tremendous and ever-increasing applications in complex engineering systems; thus, it is important to develop non-destructive and efficient condition monitoring methods to improve damage prediction, thereby avoiding catastrophic failures and reducing standby time. Nondestructive condition monitoring techniques when combined with machine learning applications can contribute towards the stated improvements. Thus, the research question taken into consideration for this paper is “Can machine learning techniques provide efficient damage classification of composite materials to improve condition monitoring using features extracted from acousto-ultrasonic measurements?” In order to answer this question, acoustic-ultrasonic signals in Carbon Fiber Reinforced Polymer (CFRP) composites for distinct damage levels were taken from NASA Ames prognostics data repository. Statistical condition indicators of the signals were used as features to train and test four traditional machine learning algorithms such as K-nearest neighbors, support vector machine, Decision Tree and Random Forest, and their performance was compared and discussed. Results showed higher accuracy for Random Forest with a strong dependency on the feature extraction/selection techniques employed. By combining data analysis from acoustic-ultrasonic measurements in composite materials with machine learning tools, this work contributes to the development of intelligent damage classification algorithms that can be applied to advanced online diagnostics and health management strategies of composite materials, operating under more complex working conditions.


2018 ◽  
Vol 25 (7) ◽  
pp. 855-861 ◽  
Author(s):  
Halil Kilicoglu ◽  
Graciela Rosemblat ◽  
Mario Malički ◽  
Gerben ter Riet

Abstract Objective To automatically recognize self-acknowledged limitations in clinical research publications to support efforts in improving research transparency. Methods To develop our recognition methods, we used a set of 8431 sentences from 1197 PubMed Central articles. A subset of these sentences was manually annotated for training/testing, and inter-annotator agreement was calculated. We cast the recognition problem as a binary classification task, in which we determine whether a given sentence from a publication discusses self-acknowledged limitations or not. We experimented with three methods: a rule-based approach based on document structure, supervised machine learning, and a semi-supervised method that uses self-training to expand the training set in order to improve classification performance. The machine learning algorithms used were logistic regression (LR) and support vector machines (SVM). Results Annotators had good agreement in labeling limitation sentences (Krippendorff’s α = 0.781). Of the three methods used, the rule-based method yielded the best performance with 91.5% accuracy (95% CI [90.1-92.9]), while self-training with SVM led to a small improvement over fully supervised learning (89.9%, 95% CI [88.4-91.4] vs 89.6%, 95% CI [88.1-91.1]). Conclusions The approach presented can be incorporated into the workflows of stakeholders focusing on research transparency to improve reporting of limitations in clinical studies.


Symmetry ◽  
2021 ◽  
Vol 13 (3) ◽  
pp. 403
Author(s):  
Muhammad Waleed ◽  
Tai-Won Um ◽  
Tariq Kamal ◽  
Syed Muhammad Usman

In this paper, we apply the multi-class supervised machine learning techniques for classifying the agriculture farm machinery. The classification of farm machinery is important when performing the automatic authentication of field activity in a remote setup. In the absence of a sound machine recognition system, there is every possibility of a fraudulent activity taking place. To address this need, we classify the machinery using five machine learning techniques—K-Nearest Neighbor (KNN), Support Vector Machine (SVM), Decision Tree (DT), Random Forest (RF) and Gradient Boosting (GB). For training of the model, we use the vibration and tilt of machinery. The vibration and tilt of machinery are recorded using the accelerometer and gyroscope sensors, respectively. The machinery included the leveler, rotavator and cultivator. The preliminary analysis on the collected data revealed that the farm machinery (when in operation) showed big variations in vibration and tilt, but observed similar means. Additionally, the accuracies of vibration-based and tilt-based classifications of farm machinery show good accuracy when used alone (with vibration showing slightly better numbers than the tilt). However, the accuracies improve further when both (the tilt and vibration) are used together. Furthermore, all five machine learning algorithms used for classification have an accuracy of more than 82%, but random forest was the best performing. The gradient boosting and random forest show slight over-fitting (about 9%), but both algorithms produce high testing accuracy. In terms of execution time, the decision tree takes the least time to train, while the gradient boosting takes the most time.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Tom Elliot ◽  
Robert Morse ◽  
Duane Smythe ◽  
Ashley Norris

AbstractIt is 50 years since Sieveking et al. published their pioneering research in Nature on the geochemical analysis of artefacts from Neolithic flint mines in southern Britain. In the decades since, geochemical techniques to source stone artefacts have flourished globally, with a renaissance in recent years from new instrumentation, data analysis, and machine learning techniques. Despite the interest over these latter approaches, there has been variation in the quality with which these methods have been applied. Using the case study of flint artefacts and geological samples from England, we present a robust and objective evaluation of three popular techniques, Random Forest, K-Nearest-Neighbour, and Support Vector Machines, and present a pipeline for their appropriate use. When evaluated correctly, the results establish high model classification performance, with Random Forest leading with an average accuracy of 85% (measured through F1 Scores), and with Support Vector Machines following closely. The methodology developed in this paper demonstrates the potential to significantly improve on previous approaches, particularly in removing bias, and providing greater means of evaluation than previously utilised.


Author(s):  
Andres Bustamante-Arias ◽  
Abbas Cheddad ◽  
Julio Cesar Jimenez-Perez ◽  
Alejandro Rodriguez-Garcia

Machine learning (ML) has a large capacity to learn and analyze a large volume of data. This study aimed to train different algorithms to discriminate between healthy and pathologic corneal images by evaluating digitally processed spectral-domain optical coherence tomography (SD-OCT) corneal images. A set of 22 SD-OCT images belonging to a random set of corneal pathologies was compared to 71 healthy corneas (control group). A binary classification method was applied; three approaches of ML were used. Once all images were analyzed, representative areas from every digital image were also processed and analyzed for a statistical feature comparison between healthy and pathologic corneas. The best performance was obtained from transfer learning - support vector machine (TL-SVM) (AUROC = 0.94, SPE 88%, SEN 100%) and transfer learning – random forest (TL- RF) method (AUROC = 0.92, SPE 84%, SEN 100%), followed by convolutional neural network (CNN) (AUROC = 0.84, SPE 77%, SEN 91%) and random forest (AUROC = 0.77, SPE 60%, SEN 95%). The highest diagnostic accuracy in classifying corneal images was achieved with the TL-SVM and the TL-RF models. In image classification, CNN was a strong predictor. This pilot experimental study developed a systematic mechanized system to discern pathologic from healthy corneas.


2014 ◽  
Vol 8 (3) ◽  
pp. 227-235 ◽  
Author(s):  
Cíntia Matsuda Toledo ◽  
Andre Cunha ◽  
Carolina Scarton ◽  
Sandra Aluísio

Discourse production is an important aspect in the evaluation of brain-injured individuals. We believe that studies comparing the performance of brain-injured subjects with that of healthy controls must use groups with compatible education. A pioneering application of machine learning methods using Brazilian Portuguese for clinical purposes is described, highlighting education as an important variable in the Brazilian scenario.OBJECTIVE: The aims were to describe how to: (i) develop machine learning classifiers using features generated by natural language processing tools to distinguish descriptions produced by healthy individuals into classes based on their years of education; and (ii) automatically identify the features that best distinguish the groups.METHODS: The approach proposed here extracts linguistic features automatically from the written descriptions with the aid of two Natural Language Processing tools: Coh-Metrix-Port and AIC. It also includes nine task-specific features (three new ones, two extracted manually, besides description time; type of scene described - simple or complex; presentation order - which type of picture was described first; and age). In this study, the descriptions by 144 of the subjects studied in Toledo18 were used, which included 200 healthy Brazilians of both genders.RESULTS AND CONCLUSION:A Support Vector Machine (SVM) with a radial basis function (RBF) kernel is the most recommended approach for the binary classification of our data, classifying three of the four initial classes. CfsSubsetEval (CFS) is a strong candidate to replace manual feature selection methods.


Foods ◽  
2021 ◽  
Vol 10 (4) ◽  
pp. 795
Author(s):  
Dongbing Yu ◽  
Yu Gu

Chinese green tea is known for its health-functional properties. There are many green tea categories, which have sub-categories with geographical indications (GTSGI). Several high-quality GTSGI planted in specific areas are labeled as famous GTSGI (FGTSGI) and are expensive. However, the subtle differences between the categories complicate the fine-grained classification of the GTSGI. This study proposes a novel framework consisting of a convolutional neural network backbone (CNN backbone) and a support vector machine classifier (SVM classifier), namely, CNN-SVM for the classification of Maofeng green tea categories (six sub-categories) and Maojian green tea categories (six sub-categories) using electronic nose data. A multi-channel input matrix was constructed for the CNN backbone to extract deep features from different sensor signals. An SVM classifier was employed to improve the classification performance due to its high discrimination ability for small sample sizes. The effectiveness of this framework was verified by comparing it with four other machine learning models (SVM, CNN-Shi, CNN-SVM-Shi, and CNN). The proposed framework had the best performance for classifying the GTSGI and identifying the FGTSGI. The high accuracy and strong robustness of the CNN-SVM show its potential for the fine-grained classification of multiple highly similar teas.


2017 ◽  
Vol 41 (S1) ◽  
pp. S191-S191 ◽  
Author(s):  
P. Mikolas ◽  
J. Hlinka ◽  
Z. Pitra ◽  
A. Skoch ◽  
T. Frodl ◽  
...  

BackgroundSchizophrenia is a chronic disorder with an early onset and high disease burden in terms of life disability. Its early recognition may delay the resulting brain structural/functional alterations and improve treatment outcomes. Unlike conventional group-statistics, machine-learning techniques made it possible to classify patients and controls based on the disease patterns on an individual level. Diagnostic classification in first-episode schizophrenia to date was mostly performed on sMRI or fMRI data. DTI modalities have not gained comparable attention.MethodsWe performed the classification of 77 FES patients and 77 healthy controls matched by age and sex from fractional anisotropy data from using linear support-vector machine (SVM). We further analyzed the effect of medication and symptoms on the classification performance using standard statistical measures (t-test, linear regression) and machine learning (Kernel–Ridge regression).ResultsThe SVM distinguished between patients and controls with significant accuracy of 62.34% (P = 0.005). There was no association between the classification performance and medication nor symptoms. Group level statistical analysis yielded brain-wide significant differences in FA.ConclusionThe SVM in combination with brain white-matter fractional anisotropy might help differentiate FES from HC. The performance of our classification model was not associated with symptoms or medications and therefore reflects trait markers in the early course of the disease.Disclosure of interestThe authors have not supplied their declaration of competing interest.


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