scholarly journals IKBKB expression in clear cell renal cell carcinoma is associated with tumor grade and patient outcomes

Author(s):  
Bartlomiej Krazinski ◽  
Anna Kowalczyk ◽  
Agnieszka Sliwinska‑Jewsiewicka ◽  
Jedrzej Grzegrzolka ◽  
Janusz Godlewski ◽  
...  
2011 ◽  
Vol 29 (2) ◽  
pp. 123-129 ◽  
Author(s):  
Marieta I. Toma ◽  
Thomas Weber ◽  
Matthias Meinhardt ◽  
Stefan Zastrow ◽  
Marc-Oliver Grimm ◽  
...  

PLoS ONE ◽  
2018 ◽  
Vol 13 (2) ◽  
pp. e0193477 ◽  
Author(s):  
Damien Ambrosetti ◽  
Maeva Dufies ◽  
Bérengère Dadone ◽  
Matthieu Durand ◽  
Delphine Borchiellini ◽  
...  

SpringerPlus ◽  
2014 ◽  
Vol 3 (1) ◽  
Author(s):  
Kousei Ishigami ◽  
Leandro V. Leite ◽  
Marius G. Pakalniskis ◽  
Daniel K. Lee ◽  
Danniele G. Holanda ◽  
...  

2020 ◽  
Vol 8 (10) ◽  
Author(s):  
Carter MCauley ◽  
Vasthy Anang ◽  
Breanna Cole ◽  
Glenn Simmons

According to the National Institutes of Health, clear cell renal cell carcinoma (ccRCC) is the most common type of Renal Cell Carcinoma (RCC), making up approximately 75% of total renal carcinoma cases. Clear cell Renal Cell Carcinoma is characterized by a significant accumulation of lipids in the cytoplasm, which allows light from microscopes to pass through giving them a “clear” phenotype. Many of these lipids are in the form of fatty acids, both free and incorporated into lipid droplets. RCC is typically associated with a poor prognosis due to the lack of specific symptoms. Some symptoms include blood in urine, fever, lump on the side, weight loss, fatigue, to name a few; all of which can be associated with non-specific, non-cancerous, health conditions that contribute to difficult diagnosis. Treatment of RCC has typically been centered around radical nephrectomy as the standard of care, but due to the potentially small size of lesions and the possibility of causing surgically induced chronic kidney disease, treatments have shifted to more cautious, less invasive approaches. These approaches include active surveillance, nephron-sparing surgery, and other minimally invasive techniques like cryotherapy and renal ablation. Although these techniques have had the desired effect of reducing the number of surgeries, there is still considerable potential for renal impairment and the chance that tumors can grow out of control without surgery. With the difficulty that surrounds the treatment of ccRCC and its considerably high mortality rate amongst urological cancers, it is important to look for novel approaches to improve patient outcomes. This review looks at available literature and our data that suggests the lipogenic enzyme stearoyl-CoA desaturase may be more beneficial to patient survival than once thought. As our understanding of the importance of lipids in cell metabolism and longevity matures, it is important to present new perspectives that present a new understanding of ccRCC and the role of lipids in survival mechanisms engaged by transformed cells during cancer progression. In this review, we provide evidence that pharmacological inhibition of lipid desaturation in renal cancer patients is not without risk, and that the presence of unsaturated fatty acids may be a beneficial factor in patient outcomes. Although more direct experimental evidence is needed to make definitive conclusions, it is clear that the work reviewed herein should challenge our current understanding of cancer biology and may inform novel approaches to the diagnosis and treatment of ccRCC.


2019 ◽  
Vol 45 (10) ◽  
pp. 3184-3192
Author(s):  
Heidi Coy ◽  
Jonathan R. Young ◽  
Allan J. Pantuck ◽  
Michael L. Douek ◽  
Anthony Sisk ◽  
...  

2019 ◽  
Vol 37 (7_suppl) ◽  
pp. 663-663
Author(s):  
Durga Udayakumar ◽  
Durgesh Dwivedi ◽  
Ze Zhang ◽  
Yin Xi ◽  
Tao Wang ◽  
...  

663 Background: Intratumoral heterogeneity (ITH) relates to aggressiveness in clear cell renal cell carcinoma (ccRCC), the most common and aggressive subtype of kidney cancer. Percutaneous biopsies have high diagnostic accuracy. However, ITH lowers their reliability in larger, heterogeneous tumors. Haralick texture features extracted from a gray level co-occurrence matrix (GLCM) is a robust method to assess intrinsic tumor imaging characteristics. Some of these features, including entropy as a measure of ITH, have recently been used in differentiating malignant from benign tumors in various organs. We aim to understand how tumor entropy extracted from magnetic resonance (MR) imaging correlate with tumor grade (aggressiveness) and gene expression heterogeneity in ccRCC. Methods: This IRB-approved, prospective study included T2-weighted (T2W) and arterial spin labeled (ASL) MR images of 62 patients with ccRCC. The GLCM was constructed for regions-of interest (ROI) within the tumor and 13 Haralick texture features were estimated. Correlations between texture features and tumor grade were evaluated by logistic regression and quantified by the area under the receiving operating characteristic (ROC) curve (AUC). RNA sequencing of 182 tumor samples in 49 resected tumors was performed. Entropy was correlated with standard deviation (SD) of normalized gene expression levels in multiple samples from the same tumor. Spearman correlation (rho) was computed for each gene. False discovery rate q values < 0.05 were considered statistically significant. Results: Entropy was higher in high-grade than low-grade tumors (11.28 ± 0.52 vs. 10.95 ± 0.65) on T2W (q = 0.028) and ASL (10.45 ± 1.15 vs. 9.65 ± 1.29) (q = 0.013). Entropy had an AUC of 0.70 (T2) for high-grade prediction and was weakly correlated with tumor size (R2 = 0.2). Higher T2 and ASL entropy correlated with higher SD of gene expression. Gene ontology analysis of top correlated genes revealed strong enrichment of genes in metabolic processes. Conclusions: Higher MRI entropy predicts high tumor grade and correlates with increased heterogeneity in gene expression of metabolic processes.


Author(s):  
Natalie L. Demirjian ◽  
Bino A. Varghese ◽  
Steven Y. Cen ◽  
Darryl H. Hwang ◽  
Manju Aron ◽  
...  

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