scholarly journals Immersion freezing of ice nucleation active protein complexes

2013 ◽  
Vol 13 (11) ◽  
pp. 5751-5766 ◽  
Author(s):  
S. Hartmann ◽  
S. Augustin ◽  
T. Clauss ◽  
H. Wex ◽  
T. Šantl-Temkiv ◽  
...  
Keyword(s):  
Outer Membrane ◽  
Pseudomonas Syringae ◽  
Nucleation Rate ◽  
Protein Complex ◽  
Protein Complexes ◽  
Ice Nucleation ◽  
Minor Importance ◽  
Class Iii ◽  
Temperature Range ◽  
Immersion Freezing

Abstract. Utilising the Leipzig Aerosol Cloud Interaction Simulator (LACIS), the immersion freezing behaviour of droplet ensembles containing monodisperse particles, generated from a Snomax™ solution/suspension, was investigated. Thereto ice fractions were measured in the temperature range between −5 °C to −38 °C. Snomax™ is an industrial product applied for artificial snow production and contains Pseudomonas syringae} bacteria which have long been used as model organism for atmospheric relevant ice nucleation active (INA) bacteria. The ice nucleation activity of such bacteria is controlled by INA protein complexes in their outer membrane. In our experiments, ice fractions increased steeply in the temperature range from about −6 °C to about −10 °C and then levelled off at ice fractions smaller than one. The plateau implies that not all examined droplets contained an INA protein complex. Assuming the INA protein complexes to be Poisson distributed over the investigated droplet populations, we developed the CHESS model (stoCHastic modEl of similar and poiSSon distributed ice nuclei) which allows for the calculation of ice fractions as function of temperature and time for a given nucleation rate. Matching calculated and measured ice fractions, we determined and parameterised the nucleation rate of INA protein complexes exhibiting class III ice nucleation behaviour. Utilising the CHESS model, together with the determined nucleation rate, we compared predictions from the model to experimental data from the literature and found good agreement. We found that (a) the heterogeneous ice nucleation rate expression quantifying the ice nucleation behaviour of the INA protein complex is capable of describing the ice nucleation behaviour observed in various experiments for both, Snomax™ and P. syringae bacteria, (b) the ice nucleation rate, and its temperature dependence, seem to be very similar regardless of whether the INA protein complexes inducing ice nucleation are attached to the outer membrane of intact bacteria or membrane fragments, (c) the temperature range in which heterogeneous droplet freezing occurs, and the fraction of droplets being able to freeze, both depend on the actual number of INA protein complexes present in the droplet ensemble, and (d) possible artifacts suspected to occur in connection with the drop freezing method, i.e., the method frequently used by biologist for quantifying ice nucleation behaviour, are of minor importance, at least for substances such as P. syringae, which induce freezing at comparably high temperatures. The last statement implies that for single ice nucleation entities such as INA protein complexes, it is the number of entities present in the droplet population, and the entities' nucleation rate, which control the freezing behaviour of the droplet population. Quantities such as ice active surface site density are not suitable in this context. The results obtained in this study allow a different perspective on the quantification of the immersion freezing behaviour of bacterial ice nucleation.

scholarly journals Immersion freezing of ice nucleating active protein complexes

2012 ◽  
Vol 12 (8) ◽  
pp. 21321-21353 ◽  
Author(s):  
S. Hartmann ◽  
S. Augustin ◽  
T. Clauss ◽  
J. Voigtländer ◽  
D. Niedermeier ◽  
...  
Keyword(s):  
Pseudomonas Syringae ◽  
Nucleation Rate ◽  
Protein Complex ◽  
Protein Complexes ◽  
Ice Nucleation ◽  
Temperature Range ◽  
Immersion Freezing ◽  
New Perspective ◽  
Lower Temperature ◽  
Heterogeneous Ice Nucleation

Abstract. Biological particles, e.g. bacteria and their Ice Nucleating Active (INA) protein complexes, might play an important role for the ice formation in atmospheric mixed-phase clouds. Therefore, the immersion freezing behavior of INA protein complexes generated from a SnomaxTM solution/suspension was investigated as function of temperature in a range of −5 °C to −38 °C at the Leipzig Aerosol Cloud Interaction Simulator (LACIS). The immersion freezing of droplets containing small numbers of INA protein complexes occurs in a temperature range of −7 °C and −10 °C. The experiments performed in the lower temperature range, where all droplets freeze which contain at least one INA protein complex, are used to determine the average number of INA protein complexes present, assuming that the INA protein complexes are Poisson distributed over the droplet ensemble. Knowing the average number of INA protein complexes, the heterogeneous ice nucleation rate and rate coefficient of a single INA protein complex is determined by using the newly-developed CHESS model (stoCHastic model of idEntical poiSSon distributed ice nuclei). Therefore, we assume the ice nucleation process to be of stochastic nature, and a parameterization of the INA protein complex's nucleation rate. Analyzing the results of immersion freezing experiments from literature (SnomaxTM and Pseudomonas syringae bacteria), to results gained in this study, demonstrates that first, a similar temperature dependence of the heterogeneous ice nucleation rate for a single INA protein complex was found in all experiments, second, the shift of the ice fraction curves to higher temperatures can be explained consistently by a higher average number of INA protein complexes being present in the droplet ensemble, and finally the heterogeneous ice nucleation rate of one single INA protein complex might be also applicable for intact Pseudomonas syringae bacteria cells. The results obtained in this study allow a new perspective on the interpretation of immersion freezing experiments considering INA protein complexes and the derived simple parameterization of the heterogeneous ice nucleation rate can be used in cloud resolving models for studying the effect of bacteria induced ice nucleation.

scholarly journals Intercomparing different devices for the investigation of ice nucleating particles using Snomax<sup>®</sup> as test substance

2015 ◽  
Vol 15 (3) ◽  
pp. 1463-1485 ◽  
Author(s):  
H. Wex ◽  
S. Augustin-Bauditz ◽  
Y. Boose ◽  
C. Budke ◽  
J. Curtius ◽  
...  
Keyword(s):  
Pseudomonas Syringae ◽  
Protein Complexes ◽  
Test Substance ◽  
Angle Distribution ◽  
Active Protein ◽  
Experimental Conditions ◽  
Slow Cooling ◽  
Suitable Material ◽  
Temperature Range ◽  
Immersion Freezing

Abstract. Seven different instruments and measurement methods were used to examine the immersion freezing of bacterial ice nuclei from Snomax® (hereafter Snomax), a product containing ice-active protein complexes from non-viable Pseudomonas syringae bacteria. The experimental conditions were kept as similar as possible for the different measurements. Of the participating instruments, some examined droplets which had been made from suspensions directly, and the others examined droplets activated on previously generated Snomax particles, with particle diameters of mostly a few hundred nanometers and up to a few micrometers in some cases. Data were obtained in the temperature range from −2 to −38 °C, and it was found that all ice-active protein complexes were already activated above −12 °C. Droplets with different Snomax mass concentrations covering 10 orders of magnitude were examined. Some instruments had very short ice nucleation times down to below 1 s, while others had comparably slow cooling rates around 1 K min−1. Displaying data from the different instruments in terms of numbers of ice-active protein complexes per dry mass of Snomax, nm, showed that within their uncertainty, the data agree well with each other as well as to previously reported literature results. Two parameterizations were taken from literature for a direct comparison to our results, and these were a time-dependent approach based on a contact angle distribution (Niedermeier et al., 2014) and a modification of the parameterization presented in Hartmann et al. (2013) representing a time-independent approach. The agreement between these and the measured data were good; i.e., they agreed within a temperature range of 0.6 K or equivalently a range in nm of a factor of 2. From the results presented herein, we propose that Snomax, at least when carefully shared and prepared, is a suitable material to test and compare different instruments for their accuracy of measuring immersion freezing.

scholarly journals Intercomparing different devices for the investigation of ice nucleating particles using Snomax<sup>®</sup> as test substance

2014 ◽  
Vol 14 (16) ◽  
pp. 22321-22384 ◽  
Author(s):  
H. Wex ◽  
S. Augustin-Bauditz ◽  
Y. Boose ◽  
C. Budke ◽  
J. Curtius ◽  
...  
Keyword(s):  
Pseudomonas Syringae ◽  
Protein Complexes ◽  
Test Substance ◽  
Angle Distribution ◽  
Active Protein ◽  
Experimental Conditions ◽  
Slow Cooling ◽  
Suitable Material ◽  
Temperature Range ◽  
Immersion Freezing

Abstract. Seven different instruments and measurement methods were used to examine the immersion freezing of bacterial ice nuclei from Snomax® (hereafter Snomax), a product containing ice active protein complexes from non-viable Pseudomonas syringae bacteria. The experimental conditions were kept as similar as possible for the different measurements. Of the participating instruments, some examined droplets which had been made from suspensions directly, and the others examined droplets activated on previously generated Snomax particles, with particle diameters of mostly a few hundred nanometers and up to a few micrometers in some cases. Data were obtained in the temperature range from −2 to −38 °C, and it was found that all ice active protein complexes were already activated above −12 °C. Droplets with different Snomax mass concentrations covering 10 orders of magnitude were examined. Some instruments had very short ice nucleation times down to below 1 s, while others had comparably slow cooling rates around 1 K min−1. Displaying data from the different instruments in terms of numbers of ice active protein complexes per dry mass of Snomax, nm, showed that within their uncertainty the data agree well with each other as well as to previously reported literature results. Two parameterizations were taken from literature for a direct comparison to our results, and these were a time dependent approach based on a contact angle distribution Niedermeier et al. (2014) and a modification of the parameterization presented in Hartmann et~al.~(2013) representing a time independent approach. The agreement between these and the measured data were good, i.e. they agreed within a temperature range of 0.6 K or equivalently a range in nm of a factor of 2. From the results presented herein, we propose that Snomax, at least when carefully shared and prepared, is a suitable material to test and compare different instruments for their accuracy of measuring immersion freezing.

scholarly journals Heterogeneous ice nucleation activity of bacteria: new laboratory experiments at simulated cloud conditions

2008 ◽  
Vol 5 (5) ◽  
pp. 1425-1435 ◽  
Author(s):  
O. Möhler ◽  
D. G. Georgakopoulos ◽  
C. E. Morris ◽  
S. Benz ◽  
V. Ebert ◽  
...  
Keyword(s):  
Pseudomonas Syringae ◽  
Cloud Condensation Nuclei ◽  
Bacterial Species ◽  
Ice Nucleation ◽  
Cloud Chamber ◽  
Bacterial Cells ◽  
Active Fraction ◽  
Temperature Range ◽  
Spray Droplets ◽  
Immersion Freezing

Abstract. The ice nucleation activities of five different Pseudomonas syringae, Pseudomonas viridiflava and Erwinia herbicola bacterial species and of Snomax™ were investigated in the temperature range between −5 and −15°C. Water suspensions of these bacteria were directly sprayed into the cloud chamber of the AIDA facility of Forschungszentrum Karlsruhe at a temperature of −5.7°C. At this temperature, about 1% of the Snomax™ cells induced immersion freezing of the spray droplets before the droplets evaporated in the cloud chamber. The living cells didn't induce any detectable immersion freezing in the spray droplets at −5.7°C. After evaporation of the spray droplets the bacterial cells remained as aerosol particles in the cloud chamber and were exposed to typical cloud formation conditions in experiments with expansion cooling to about −11°C. During these experiments, the bacterial cells first acted as cloud condensation nuclei to form cloud droplets. Then, only a minor fraction of the cells acted as heterogeneous ice nuclei either in the condensation or the immersion mode. The results indicate that the bacteria investigated in the present study are mainly ice active in the temperature range between −7 and −11°C with an ice nucleation (IN) active fraction of the order of 10−4. In agreement to previous literature results, the ice nucleation efficiency of Snomax™ cells was much larger with an IN active fraction of 0.2 at temperatures around −8°C.

scholarly journals The Leipzig Cloud Interaction Simulator (LACIS): operating principle and theoretical studies concerning homogeneous and heterogeneous ice nucleation

2010 ◽  
Vol 10 (11) ◽  
pp. 25577-25617
Author(s):  
S. Hartmann ◽  
D. Niedermeier ◽  
J. Voigtländer ◽  
T. Clauss ◽  
R. A. Shaw ◽  
...  
Keyword(s):  
Experimental Data ◽  
Numerical Model ◽  
Nucleation Rate ◽  
Rate Coefficient ◽  
Ice Nucleation ◽  
Freezing Behavior ◽  
Nucleation Theory ◽  
Dust Particles ◽  
Immersion Freezing ◽  
Heterogeneous Ice Nucleation

Abstract. At the Leipzig Cloud Interaction Simulator (LACIS) experiments investigating homogeneous and heterogeneous nucleation of ice (particularly immersion freezing in the latter case) have been carried out. Here both the physical LACIS setup and the numerical model developed to design experiments at LACIS and interpret their results are presented in detail. Combining results from the numerical model with experimental data, it was found that for the experimental parameter space considered, classical homogeneous ice nucleation theory is able to predict the freezing behavior of highly diluted ammonium sulfate solution droplets, while classical heterogeneous ice nucleation theory, together with the assumption of a constant contact angle, fails to predict the immersion freezing behavior of surrogate mineral dust particles (Arizona Test Dust, ATD). The main reason for this failure is the compared to experimental data apparently overly strong temperature dependence of the nucleation rate coefficient. Assuming, in the numerical model, Classical Nucleation Theory (CNT) for homogeneous ice nucleation and a CNT-based parameterization for the nucleation rate coefficient in the immersion freezing mode, recently published by our group, it was found that even for a relatively effective ice nucleating agent such as pure ATD, there is a temperature range where homogeneous ice nucleation is dominant. The main explanation is the apparently different temperature dependencies of the two freezing mechanisms. Finally, reviewing the assumptions made during the derivation of the parameterization, it was found that the assumption of constant temperature during ice nucleation and the chosen nucleation time were highly justified, underlining the applicability of both the method to determine the fitting coefficients in the parameterization equation, and the validity of the parameterization concept itself.

Ice in Clouds Experiment–Layer Clouds. Part II: Testing Characteristics of Heterogeneous Ice Formation in Lee Wave Clouds

2012 ◽  
Vol 69 (3) ◽  
pp. 1066-1079 ◽  
Author(s):  
P. R. Field ◽  
A. J. Heymsfield ◽  
B. J. Shipway ◽  
P. J. DeMott ◽  
K. A. Pratt ◽  
...  
Keyword(s):  
Ice Nucleation ◽  
Ice Formation ◽  
Chemical Characteristics ◽  
Ice Clouds ◽  
Field Campaign ◽  
Temperature Range ◽  
Ice Nuclei ◽  
Lee Wave ◽  
Immersion Freezing ◽  
Physical And Chemical

Abstract Heterogeneous ice nucleation is a source of uncertainty in models that represent ice clouds. The primary goal of the Ice in Clouds Experiment–Layer Clouds (ICE-L) field campaign was to determine if a link can be demonstrated between ice concentrations and the physical and chemical characteristics of the ambient aerosol. This study combines a 1D kinematic framework with lee wave cloud observations to infer ice nuclei (IN) concentrations that were compared to IN observations from the same flights. About 30 cloud penetrations from six flights were modeled. The temperature range of the observations was −16° to −32°C. Of the three simplified ice nucleation representations tested (deposition, evaporation freezing, and condensation/immersion droplet freezing), condensation/immersion freezing reproduced the lee wave cloud observations best. IN concentrations derived from the modeling ranged from 0.1 to 13 L−1 compared to 0.4 to 6 L−1 from an IN counter. A better correlation was found between temperature and the ratio of IN concentration to the concentration of large aerosol (&gt;500 nm) than between IN concentration and the large aerosol concentration or temperature alone.

scholarly journals Heterogeneous ice nucleation activity of bacteria: new laboratory experiments at simulated cloud conditions

2008 ◽  
Vol 5 (2) ◽  
pp. 1445-1468 ◽  
Author(s):  
O. Möhler ◽  
D. G. Georgakopoulos ◽  
C. E. Morris ◽  
S. Benz ◽  
V. Ebert ◽  
...  
Keyword(s):  
Pseudomonas Syringae ◽  
Cloud Condensation Nuclei ◽  
Bacterial Species ◽  
Ice Nucleation ◽  
Cloud Chamber ◽  
Bacterial Cells ◽  
Spray Formation ◽  
Temperature Range ◽  
Expansion Cooling ◽  
Activation Conditions

Abstract. The ice nucleation activities of five different Pseudomonas syringae, Pseudomonas viridiflava and Erwinia herbicola bacterial species and of SnomaxTM were investigated in the temperature range between −5 and −15°C. Water suspensions of these bacteria were directly spray into the cloud chamber of the AIDA facility of Forschungszentrum Karlsruhe at a temperature of −5.7°. At this temperature, about 1% of the SnomaxTM cells induced freezing of the spray droplets before they evaporated in the cloud chamber. The other suspensions of living cells didn't induce any measurable ice concentration during spray formation at −5.7°. The remaining aerosol was exposed to typical cloud activation conditions in subsequent experiments with expansion cooling to about −11°C. During these experiments, the bacterial cells first acted as cloud condensation nuclei to form cloud droplets and then eventually acted as ice nuclei to freeze the droplets. The results indicate that the bacteria investigated in the present study are mainly ice active in the temperature range between −7 and −11°C with an INA fraction of the order of 10−4. The ice nucleation efficiency of SnomaxTM cells was much larger with an INA fraction of 0.2 at temperatures around −8°C.

scholarly journals Urediospores of rust fungi are ice nucleation active at > −10 °C and harbor ice nucleation active bacteria

2013 ◽  
Vol 13 (8) ◽  
pp. 4223-4233 ◽  
Author(s):  
C. E. Morris ◽  
D. C. Sands ◽  
C. Glaux ◽  
J. Samsatly ◽  
S. Asaad ◽  
...  
Keyword(s):  
Pseudomonas Syringae ◽  
Ice Nucleation ◽  
Rust Fungi ◽  
Plant Diseases ◽  
Ice Nuclei ◽  
Ice Nucleators ◽  
The Usa ◽  
Immersion Freezing ◽  
Nucleation Activity ◽  
Ice Nucleation Activity

Abstract. Various features of the biology of the rust fungi and of the epidemiology of the plant diseases they cause illustrate the important role of rainfall in their life history. Based on this insight we have characterized the ice nucleation activity (INA) of the aerially disseminated spores (urediospores) of this group of fungi. Urediospores of this obligate plant parasite were collected from natural infections of 7 species of weeds in France, from coffee in Brazil and from field and greenhouse-grown wheat in France, the USA, Turkey and Syria. Immersion freezing was used to determine freezing onset temperatures and the abundance of ice nuclei in suspensions of washed spores. Microbiological analyses of spores from France, the USA and Brazil, and subsequent tests of the ice nucleation activity of the bacteria associated with spores were deployed to quantify the contribution of bacteria to the ice nucleation activity of the spores. All samples of spores were ice nucleation active, having freezing onset temperatures as high as −4 °C. Spores in most of the samples carried cells of ice nucleation-active strains of the bacterium Pseudomonas syringae (at rates of less than 1 bacterial cell per 100 urediospores), but bacterial INA accounted for only a small fraction of the INA observed in spore suspensions. Changes in the INA of spore suspensions after treatment with lysozyme suggest that the INA of urediospores involves a polysaccharide. Based on data from the literature, we have estimated the concentrations of urediospores in air at cloud height and in rainfall. These quantities are very similar to those reported for other biological ice nucleators in these same substrates. However, at cloud level convective activity leads to widely varying concentrations of particles of surface origin, so that mean concentrations can underestimate their possible effects on clouds. We propose that spatial and temporal concentrations of biological ice nucleators active at temperatures > −10 °C and the specific conditions under which they can influence cloud glaciation need to be further evaluated so as to understand how evolutionary processes could have positively selected for INA.

scholarly journals Homogeneous and heterogeneous ice nucleation at LACIS: operating principle and theoretical studies

2011 ◽  
Vol 11 (4) ◽  
pp. 1753-1767 ◽  
Author(s):  
S. Hartmann ◽  
D. Niedermeier ◽  
J. Voigtländer ◽  
T. Clauss ◽  
R. A. Shaw ◽  
...  
Keyword(s):  
Experimental Data ◽  
Numerical Model ◽  
Nucleation Rate ◽  
Rate Coefficient ◽  
Ice Nucleation ◽  
Freezing Behavior ◽  
Nucleation Theory ◽  
Dust Particles ◽  
Immersion Freezing ◽  
Heterogeneous Ice Nucleation

Abstract. At the Leipzig Aerosol Cloud Interaction Simulator (LACIS) experiments investigating homogeneous and heterogeneous nucleation of ice (particularly immersion freezing in the latter case) have been carried out. Here both the physical LACIS setup and the numerical model developed to design experiments at LACIS and interpret their results are presented in detail. Combining results from the numerical model with experimental data, it was found that for the experimental parameter space considered, classical homogeneous ice nucleation theory is able to predict the freezing behavior of highly diluted ammonium sulfate solution droplets, while classical heterogeneous ice nucleation theory, together with the assumption of a constant contact angle, fails to predict the immersion freezing behavior of surrogate mineral dust particles (Arizona Test Dust, ATD). The main reason for this failure is the compared to experimental data apparently overly strong temperature dependence of the nucleation rate coefficient. Assuming, in the numerical model, Classical Nucleation Theory (CNT) for homogeneous ice nucleation and a CNT-based parameterization for the nucleation rate coefficient in the immersion freezing mode, recently published by our group, it was found that even for a relatively effective ice nucleating agent such as pure ATD, there is a temperature range where homogeneous ice nucleation is dominant. The main explanation is the apparently different temperature dependencies of the two freezing mechanisms. Finally, reviewing the assumptions made during the derivation of the CNT-based parameterization for immersion freezing, it was found that the assumption of constant temperature during ice nucleation and the chosen ice nucleation time were justified, underlining the applicability of the method to determine the fitting coefficients in the parameterization equation.

scholarly journals Freezing from the inside. Ice nucleation in <i>Escherichia coli</i> and <i>Escherichia coli</i> ghosts by inner membrane bound ice nucleation protein InaZ

2019 ◽  
Author(s):  
Johannes Kassmannhuber ◽  
Sergio Mauri ◽  
Mascha Rauscher ◽  
Nadja Brait ◽  
Lea Schöner ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Outer Membrane ◽  
Pseudomonas Syringae ◽  
Survival Rates ◽  
Ice Nucleation ◽  
Free Access ◽  
Ice Nucleation Protein ◽  
Inner Membrane ◽  
E Coli ◽  
Subzero Temperatures

Abstract. An N-terminal truncated form of the ice nucleation protein (INP) of Pseudomonas syringae lacking the transport sequence for the localization of InaZ in the outer membrane was fused to N- and C- terminal inner membrane (IM) anchors and expressed in Escherichia coli C41. The ice nucleation (IN) activity of the corresponding living recombinant E. coli catalyzing heterogeneous ice formation of super-cooled water at high subzero temperatures was tested by droplet freezing assay. Median freezing temperature (T50) of the parental living E. coli C41 cells without INP was detected at −20.1 °C and with inner membrane anchored INPs at T50 value between −7 °C and −9 °C demonstrating that IM anchored INPs facing the luminal IM site are able to induce IN from the inside of the bacterium almost similar to bacterial INPs located at the outer membrane. Bacterial Ghosts (BGs) derived from the different constructs showed first droplet freezing values between −6 °C and −8 °C whereas C41 BGs alone without carrying IM anchored INPs exhibit a T50 of −18.9 °C. The more efficient IN of INP-BGs compared to their living parental strains can be explained by the free access of IM anchored INP constructs to ultrapure water filling the inner space of the BGs. The cell killing rate of -NINP carrying E. coli at subzero temperatures is higher when compared to survival rates of the parental C41 strain.

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