scholarly journals Evaluating the agreement between measurements and models of net ecosystem exchange at different times and timescales using wavelet coherence: an example using data from the North American Carbon Program Site-Level Interim Synthesis

2013 ◽  
Vol 10 (11) ◽  
pp. 6893-6909 ◽  
Author(s):  
P. C. Stoy ◽  
M. C. Dietze ◽  
A. D. Richardson ◽  
R. Vargas ◽  
A. G. Barr ◽  
...  

Abstract. Earth system processes exhibit complex patterns across time, as do the models that seek to replicate these processes. Model output may or may not be significantly related to observations at different times and on different frequencies. Conventional model diagnostics provide an aggregate view of model–data agreement, but usually do not identify the time and frequency patterns of model–data disagreement, leaving unclear the steps required to improve model response to environmental drivers that vary on characteristic frequencies. Wavelet coherence can quantify the times and timescales at which two time series, for example time series of models and measurements, are significantly different. We applied wavelet coherence to interpret the predictions of 20 ecosystem models from the North American Carbon Program (NACP) Site-Level Interim Synthesis when confronted with eddy-covariance-measured net ecosystem exchange (NEE) from 10 ecosystems with multiple years of available data. Models were grouped into classes with similar approaches for incorporating phenology, the calculation of NEE, the inclusion of foliar nitrogen (N), and the use of model–data fusion. Models with prescribed, rather than prognostic, phenology often fit NEE observations better on annual to interannual timescales in grassland, wetland and agricultural ecosystems. Models that calculated NEE as net primary productivity (NPP) minus heterotrophic respiration (HR) rather than gross ecosystem productivity (GPP) minus ecosystem respiration (ER) fit better on annual timescales in grassland and wetland ecosystems, but models that calculated NEE as GPP minus ER were superior on monthly to seasonal timescales in two coniferous forests. Models that incorporated foliar nitrogen (N) data were successful at capturing NEE variability on interannual (multiple year) timescales at Howland Forest, Maine. The model that employed a model–data fusion approach often, but not always, resulted in improved fit to data, suggesting that improving model parameterization is important but not the only step for improving model performance. Combined with previous findings, our results suggest that the mechanisms driving daily and annual NEE variability tend to be correctly simulated, but the magnitude of these fluxes is often erroneous, suggesting that model parameterization must be improved. Few NACP models correctly predicted fluxes on seasonal and interannual timescales where spectral energy in NEE observations tends to be low, but where phenological events, multi-year oscillations in climatological drivers, and ecosystem succession are known to be important for determining ecosystem function. Mechanistic improvements to models must be made to replicate observed NEE variability on seasonal and interannual timescales.

2013 ◽  
Vol 10 (2) ◽  
pp. 3039-3077 ◽  
Author(s):  
P. C. Stoy ◽  
M. Dietze ◽  
A. D. Richardson ◽  
R. Vargas ◽  
A. G. Barr ◽  
...  

Abstract. Earth system processes exhibit complex patterns across time, as do the models that seek to replicate these processes. Model output may or may not be significantly related to observations at different times and on different frequencies. Conventional model diagnostics provide an aggregate view of model-data agreement, but usually do not identify the time and frequency patterns of model misfit, leaving unclear the steps required to improve model response to environmental drivers that vary on characteristic frequencies. Wavelet coherence can quantify the times and frequencies at which models and measurements are significantly different. We applied wavelet coherence to interpret the predictions of twenty ecosystem models from the North American Carbon Program (NACP) Site-Level Interim Synthesis when confronted with eddy covariance-measured net ecosystem exchange (NEE) from ten ecosystems with multiple years of available data. Models were grouped into classes with similar approaches for incorporating phenology, the calculation of NEE, and the inclusion of foliar nitrogen (N). Models with prescribed, rather than prognostic, phenology often fit NEE observations better on annual to interannual time scales in grassland, wetland and agricultural ecosystems. Models that calculate NEE as net primary productivity (NPP) minus heterotrophic respiration (HR) rather than gross ecosystem productivity (GPP) minus ecosystem respiration (ER) fit better on annual time scales in grassland and wetland ecosystems, but models that calculate NEE as GPP – ER were superior on monthly to seasonal time scales in two coniferous forests. Models that incorporated foliar nitrogen (N) data were successful at capturing NEE variability on interannual (multiple year) time scales at Howland Forest, Maine. Combined with previous findings, our results suggest that the mechanisms driving daily and annual NEE variability tend to be correctly simulated, but the magnitude of these fluxes is often erroneous, suggesting that model parameterization must be improved. Few NACP models correctly predicted fluxes on seasonal and interannual time scales where spectral energy in NEE observations tends to be low, but where phenological events, multi-year oscillations in climatological drivers, and ecosystem succession are known to be important for determining ecosystem function. Mechanistic improvements to models must be made to replicate observed NEE variability on seasonal and interannual time scales.


Author(s):  
Christopher R. Schwalm ◽  
Christopher A. Williams ◽  
Kevin Schaefer ◽  
Ryan Anderson ◽  
M. Altaf Arain ◽  
...  

2009 ◽  
Vol 9 (5) ◽  
pp. 22407-22458 ◽  
Author(s):  
S. M. Gourdji ◽  
A. I. Hirsch ◽  
K. L. Mueller ◽  
A. E. Andrews ◽  
A. M. Michalak

Abstract. Using synthetic continuous CO2 measurements from the nine sampling locations operational across North America in 2004, this paper investigates the optimal setup for, and constraint on fluxes achieved by, a regional geostatistical atmospheric CO2 inversion over the continent. The geostatistical framework does not require explicit prior flux estimates, nor any other process-based information, and is therefore particularly well suited for investigating the information content of the atmospheric CO2 measurements from a limited network. The atmospheric data are first used with the Restricted Maximum Likelihood (RML) algorithm to infer the model-data mismatch and a priori spatial covariance parameters applied in the inversion. The implemented RML algorithm is found to infer robust spatial covariance parameters from the atmospheric data, as compared to the "true" solution, for cases where the flux and measurement timescales match, while model-data mismatch variances are inferred correctly across all examined cases. A series of analyses is also performed investigating the impact of the temporal scale of concentration measurements and fluxes on inversion results. Inversions using measurement data at sub-daily resolution are found to yield fluxes with a lower Root Mean Square Error (RMSE) relative to inversions using coarser-scale observations, whereas the flux resolution appears to have a lesser impact on the inversion quality. In addition, night-time data for the tall and marine boundary layer towers are found to help constrain fluxes across the continent, although they can potentially bias near-field fluxes. These general conclusions are likely to also be applicable to inversions using a synthesis Bayesian inversion approach. Overall, despite the relatively sparse and unevenly distributed network of nine towers across the North American continent, a geostatistical inversion using an optimal setup and relying solely on the atmospheric data constraint is found to estimate the North American sink for June 2004 to within approximately 10%.


Ecohydrology ◽  
2018 ◽  
Vol 11 (5) ◽  
pp. e1957 ◽  
Author(s):  
Bhaskar Mitra ◽  
D. Scott Mackay ◽  
Elise Pendall ◽  
Brent E. Ewers ◽  
Hyojung Kwon ◽  
...  

2021 ◽  
Author(s):  
Abhimanyu Sud ◽  
Darren K. Cheng ◽  
Rahim Moineddin ◽  
Erin Zlahtic ◽  
Ross Upshur

AbstractBibliometric analyses of systematic reviews offer unique opportunities to explore the character of specific scientific fields. In this time series-based analysis, dynamics of multidisciplinary care for chronic pain and opioid prescribing are analyzed over a forty-four year time span. Three distinct periods are identified, each defined by distinct research areas, as well as priorities regarding the use of opioids and the appropriate management of chronic pain. These scientometrically defined periods align with timelines identified previously by narrative historical accounts. Through cross-correlation with a mortality time series, a significant two-year lag between opioid overdose mortality and citation dynamics is identified between 2004 and 2019. This analysis demonstrates a bidirectional relationship between the scientific literature and the North American opioid overdose crisis, suggesting that the scientific literature is both reflective and generative of an important health and social phenomenon. A scientometric phenomenon of memory lapse, namely an overt and prolonged failure to cite older relevant literature, is identified using a metric of mean time to citation. It is proposed that this metric can be used to analyze changes in emerging literature and thus predict the nature of clinical and policy responses to the opioid crisis, and thus potentially to other health and social phenomena.


2014 ◽  
Vol 11 (6) ◽  
pp. 9215-9247 ◽  
Author(s):  
Y. Fang ◽  
A. M. Michalak ◽  
Y. P. Shiga ◽  
V. Yadav

Abstract. Terrestrial biospheric models (TBMs) are used to extrapolate local observations and process-level understanding of land–atmosphere carbon exchange to larger regions, and serve as a predictive tool for examining carbon-climate interactions. Understanding the performance of TBMs is thus crucial to the carbon cycle and climate science. In this study, we propose a statistical model selection approach for evaluating the spatiotemporal patterns of net ecosystem exchange (NEE) simulated by TBMs using atmospheric CO2 measurements. We find that current atmospheric observations are sensitive to the underlying spatiotemporal flux variability at sub-biome scales for a large portion of the North American continent, and that atmospheric observations can therefore be used to evaluate simulated spatiotemporal flux patterns, rather than focusing solely on flux magnitudes at aggregated scales. Results show that the proposed approach can be used to assess whether a TBM represents a substantial portion of the underlying flux variability as well as to differentiate among multiple competing TBMs. When applying the proposed approach to four prototypical TBMs, we find that the performance of TBMs varies substantially across seasons, with best performance during the growing season and limited skill during transition seasons. This seasonal difference in the ability of TBMs to represent the spatiotemporal flux variability may reflect the models' capability to represent the seasonally-varying influence of environmental drivers on fluxes. While none of the TBMs consistently outperforms the others, differences among the examined models are at least partially attributable to their internal structures. Overall, the proposed approach provides a new avenue for evaluating TBM performance based on sub-biome scale flux patterns, presenting an opportunity for assessing and informing model development using atmospheric observations.


2012 ◽  
Vol 117 (G3) ◽  
pp. n/a-n/a ◽  
Author(s):  
Kevin Schaefer ◽  
Christopher R. Schwalm ◽  
Chris Williams ◽  
M. Altaf Arain ◽  
Alan Barr ◽  
...  

2017 ◽  
Vol 44 ◽  
pp. 35-51 ◽  
Author(s):  
Vincenzo Capozzi ◽  
Giorgio Budillon

Abstract. In recent years, extreme events related to cooling and heating have taken high resonance, motivating the scientific community to carry out an intensive research activity, aimed to detect their variability and frequency. In this work, we have investigated about the frequency, the duration, the severity and the intensity of heat and cold waves in a Southern Italy high-altitude region, by analysing the climatological time series collected in Montevergine observatory. Following the guidelines provided by CLIVAR project (Climate and Ocean Variability, Predictability and Change), we have adopted indicators based on percentiles and duration to define a heat wave and cold event. Main results have highlighted a strong and significant positive trend in the last 40 years (1974–2015) in heat waves frequency, severity and intensity. On the contrary, in recent decades, cold wave events have exhibited a significant and positive trend only in intensity. Moreover, through the usage of two Wavelet Analysis tools, the Cross Wavelet Transform and the Wavelet Coherence, we have investigated about the connections between the extreme temperature events occurred in Montevergine and the large-scale atmospheric patterns. The heat wave events have exhibited relevant relationships with the Western European Zonal Circulation and the North Atlantic Oscillation, whereas the variability of cold wave events have shown linkages with the Eastern Mediterranean Pattern and the North Sea Caspian Pattern. In addition, the main features of synoptic patterns that have caused summer heat waves and winter cold waves in Montevergine site are presented.


2021 ◽  
Author(s):  
Kersti Leppä ◽  
Pauliina Schiestl-Aalto ◽  
Yu Tang ◽  
Elina Sahlstedt ◽  
Pasi Kolari ◽  
...  

<p>Stable isotopes can diagnose the response of plants to changing climate as the performance of trees in past climatic conditions is archived in the stable carbon and oxygen isotope composition (δ<sup>13</sup>C and δ<sup>18</sup>O, respectively) of tree rings. To take advantage of these records, understanding the formation of isotopic signals in newly assimilated photosynthates is necessary. Despite a voluminous literature, there exists a gap between the model- and data-oriented studies, which if welded together would benefit this line of inquiry. A unique dataset covering two growing seasons in a boreal Scots pine stand situated in Southern Finland (61.9°N, 24.3°E) is employed and is accompanied with mechanistic modeling driven by environmental conditions. Data includes: (i) shoot gas exchange of vapor, CO<sub>2</sub> and its δ<sup>13</sup>C composition, (ii) δ<sup>13</sup>C in needle bulk sugar and sucrose alone, (iii) δ<sup>18</sup>O in water in precipitation, soil, twigs and needles, and (iv) δ<sup>18</sup>O in needle bulk sugar. Overall, observed exchange rates and isotopic composition of fluxes as well as in water and sugar pools were well reproduced using the model. We further address challenges common to the analysis of isotopic signals. Firstly, time scales and integration over them is an unavoidable challenge of data sampled at different intervals, representing either snapshots or a longer history of processes. As an example of this, we illustrate that δ<sup>18</sup>O in needle water reacts instantaneously to environmental conditions, while the δ<sup>18</sup>O signal in needle sugars is an integration over time, and thus relating the latter to instantaneous environmental conditions is less evident. Given that tree-ring studies are more and more focused on intra-annual variation in δ<sup>13</sup>C and δ<sup>18</sup>O, integration over time scales cannot be neglected. Second, using model sensitivity analysis, we showcase the relative importance of environmental drivers on the variation in δ<sup>13</sup>C and δ<sup>18</sup>O – the typical aim of empirical research and paleoclimatological reconstruction. It is commonly acknowledged that the main environmental driver of δ<sup>13</sup>C or δ<sup>18</sup>O variation can differ between sites and time periods. At the study site here, the variation in δ<sup>18</sup>O seems solely driven by relative humidity, but we can, for instance, show that this would change if the δ<sup>18</sup>O signal of source water varied considerably. We are of the opinion that illustrating such points with a model-data fusion approach is a necessary (but not sufficient) first step to bridge the gap between modeling and empirical approaches, and fostering further interpretation of isotopic signals in trees.</p>


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