A neural-based bio-regionalization of the Mediterranean Sea using satellite and Argo-float records

Author(s):  
Roy El Hourany ◽  
Chris Bowler ◽  
Carlos Mejia ◽  
Michel Crépon ◽  
Sylvie Thiria

<p>The regionalization of the Mediterranean Sea has been the subject of many studies. It is a miniature ocean where most of the processes of the global ocean are encountered (Lejeusne et al., 2010). Several features of the Mediterranean (near-tropical ocean in summer with a well-formed thermocline, near-polar ocean in winter with deep convection, multiple basins with different characteristics) make it a hotspot of marine biodiversity (Coll and al., 2010) and consequently vulnerable to climate change. It is therefore important to characterize the present state of the Mediterranean Sea with robust estimators in order to study the long-term evolution of this mesocosm.</p><p>We present a partitioning of the Mediterranean Sea in regions having well defined characteristics with respect to Sea Surface Temperature and surface chlorophyll observed by satellite, and Argo mixed layer depth. This regionalization was performed by using an innovative classification based on neural networks, the so-called 2S-SOM. Its major advantage is to consider the specificity of the variables by adding automatically, through machine learning, specific weights to each of them, which facilitates the classification and consequently highlights the regional correlations. The 2S-SOM provided a well differentiated regionalization of the Mediterranean Sea waters into seven bioregions governed by specific physical and biogeochemical processes such as Intermediate-water formation in the Aegean Sea, large surface currents in the Adriatic and the Alboran, deep winter convection phenomena in the Balearic and stratification phenomena during summer in the eastern part of the Mediterranean Sea.</p><p>Besides, in order to highlight the phytoplankton diversity in these regions, we processed the satellite ocean color observations with a specific neural network approach (SOM-PFT, El Hourany et al., 2019). As a result, specific phytoplankton communities characterized by their seasonal variability are associated with the obtained Mediterranean bioregions; the dominance of the Nanophytoplankton groups is largely observed in the western basin during the period ranging from autumn to spring. While the dominance of different types of cyanobacteria Synechococcus and Prochlorococcus is highlighted in summer and more precisely in the waters of the eastern basin. Diatoms dominate throughout the year in the coastal and shallow regions, which can be explained by the presence of terrigenous input necessary for the development of this type of phytoplankton. Diatoms also largely benefit from the strong deep convection in the Balearic Sea marked by a large bloom at the end of winter convection in March.</p><p>This work will be further extended to study the phytoplankton diversity at global scale using various data set from the Tara Oceans.</p>

2020 ◽  
Author(s):  
Simona Retelletti Brogi ◽  
Marta Furia ◽  
Giancarlo Bachi ◽  
Vanessa Cardin ◽  
Giuseppe Civitarese ◽  
...  

<p>The Mediterranean Sea (Med Sea) can be considered as a natural laboratory for the study of dissolved organic matter (DOM) dynamics. Despite its small size, it is characterized by the same physical processes and dissolved organic carbon (DOC) concentration and distribution as the global ocean. The Med Sea deep water DOC pool is however older than the Atlantic one and differences in the microbial loop and in DOM dynamics have been observed between the eastern (EMED) and western (WMED) basins. Fluorescence is a fast, cheap and highly sensitive tool to study DOM dynamics, it can therefor give useful information about the main processes affecting DOM distribution.</p><p>The main aims of this study were: (i) to investigate DOM dynamics in both Med Sea basins, in relation to the physical processes (e.g. vertical stratification, irradiation); and (ii) to validate the use of a new fluorescence sensor, developed in the framework of the SENSOR project (POR FESR, Tuscany Region), for the rapid, in-situ measurements of open-sea fluorescent DOM (FDOM). DOM dynamics was investigated by measuring dissolved organic carbon (DOC) and the fluorescence of FDOM. Samples were collected from surface to bottom in 26 stations during the trans-Mediterranean cruise “MSM72”, carried out on board the R/V MARIA S.MERIAN (Institut für Meereskunde der Universität Hamburg). The stations cover both the EMED and the WMED, from Gibraltar to the Crete Island.</p><p>Six fluorescent components were identified by applying the parallel factorial analysis (PARAFAC) to the measured excitation-emission matrices (EEMs). Two components were identified as marine humic-like, two as terrestrial humic-like, one as protein-like and one as polycyclic aromatic hydrocarbon-like (PAH-like).</p><p>Temperature and salinity increased moving from the WMED to the EMED. A surface minimum in salinity, was observed in the WMED, indicating the occurrence of the Atlantic Water (AW), whereas the presence of the Levantine Intermediate Water (LIW) was observed south of Crete. The vertical distribution of both DOC and humic-like FDOM was strongly affected by the water masses circulation and water column stratification. In the upper 200 m, DOC markedly increased from 50 to 80 μM moving eastward, likewise the protein-like component dominates the upper layer and increased moving from Gibraltar to Crete. In contrast, the humic-like components showed a minimum in the surface layer, and a decreasing moving eastward, probably due to photobleaching. The PAH-like component showed its maximum in correspondence with the areas characterized by intensive naval traffic. The accumulation of DOC, observed in the EMED, could be explained by a change in DOM quality, supported by the differences in FDOM.</p><p>In 2 selected stations, the fluorescence of humic-like and protein-like compounds was also measured along the water column by using the new fluorescence sensor and compared with PARAFAC results, in order to evaluate its performance for open sea waters.</p>


2013 ◽  
Vol 14 (1) ◽  
pp. 238 ◽  
Author(s):  
I. SIOKOU ◽  
A.S. ATES ◽  
D. AYAS ◽  
J. BEN SOUISSI ◽  
T. CHATTERJEE ◽  
...  

This paper concerns records of species that have extended their distribution in the Mediterranean Sea. The finding of the rare brackish angiosperm Althenia filiformis in the island of Cyprus is interesting since its insertion in the Red Data Book of the Flora of Cyprus is suggested. The following species enriched the flora or fauna lists of the relevant countries: the red alga Sebdenia dichotoma (Greece), the hydrachnid mite Pontarachna adriatica (Slovenia), and the thalassinid Gebiacantha talismani (Turkey). Several alien species were recorded in new Mediterranean localities. The record of the burrowing goby Trypauchen vagina in the North Levantine Sea (Turkish coast), suggests the start of spreading of this Lessepsian immigrant in the Mediterranean Sea. The findings of the following species indicate the extension of their occurrence in the Mediterranean Sea: the foraminifer Amphistegina lobifera (island of Zakynthos, Greece), the medusa Cassiopea andromeda (Syria), the copepod Centropages furcatus (Aegean Sea), the decapod shrimp Melicertus hathor (island of Kastellorizo, Greece), the crab Menoethius monoceros (Gulf of Tunis), the barnacles Balanus trigonus, Megabalanus tintinnabulum, Megabalanus coccopoma and the bivalves Chama asperella, Cucurbitula cymbium (Saronikos Gulf, Greece).


2021 ◽  
Author(s):  
Giusy Fedele ◽  
Elena Mauri ◽  
Giulio Notarstefano ◽  
Pierre Marie Poulain

Abstract. The Atlantic Water (AW) and Levantine Intermediate Water (LIW) are important water masses that play a crucial role in the internal variability of the Mediterranean thermohaline circulation. In particular, their variability and interaction, along with other water masses that characterize the Mediterranean basin, such as the Western Mediterranean Deep Water (WMDW), contribute to modify the Mediterranean Outflow through the Gibraltar Strait and hence may influence the stability of the global thermohaline circulation. This work aims to characterize the AW and LIW in the Mediterranean Sea, taking advantage of the large observational dataset provided by Argo floats from 2001 to 2019. Using different diagnostics, the AW and LIW were identified, highlighting the inter-basin variability and the strong zonal gradient that characterize the two water masses in this marginal sea. Their temporal variability was also investigated focusing on trends and spectral features which constitute an important starting point to understand the mechanisms that are behind their variability. A clear salinification and warming trend have characterized the AW and LIW in the last two decades (~0.007 and 0.008 yr−1; 0.018 and 0.007 °C yr−1, respectively). The salinity and temperature trends found at subbasin scale are in good agreement with previous results. The strongest trends are found in the Adriatic basin in both the AW and LIW properties. A subbasin dependent spectral variability emerges in the AW and LIW salinity timeseries with peaks between 2 and 10 years.


1987 ◽  
Vol 21 (1) ◽  
pp. 51-74 ◽  
Author(s):  
C Jeandel ◽  
M Caisso ◽  
J.F Minster

2015 ◽  
Vol 12 (17) ◽  
pp. 14941-14980 ◽  
Author(s):  
N. Mayot ◽  
F. D'Ortenzio ◽  
M. Ribera d'Alcalà ◽  
H. Lavigne ◽  
H. Claustre

Abstract. D'Ortenzio and Ribera d'Alcalà (2009, DR09 hereafter) divided the Mediterranean Sea into "bioregions" based on the climatological seasonality (phenology) of phytoplankton. Here we investigate the interannual variability of this bioregionalization. Using 16 years of available ocean color observations (i.e. SeaWiFS and MODIS), we analyzed the spatial distribution of the DR09 trophic regimes on an annual basis. Additionally, we identified new trophic regimes, with seasonal cycles of phytoplankton biomass different from the DR09 climatological description and named "Anomalous". Overall, the classification of the Mediterranean phytoplankton phenology proposed by DR09 (i.e. "No Bloom", "Intermittently", "Bloom" and "Coastal"), is confirmed to be representative of most of the Mediterranean phytoplankton phenologies. The mean spatial distribution of these trophic regimes (i.e. bioregions) over the 16 years studied is also similar to the one proposed by DR09. But at regional scale some annual differences, in their spatial distribution and in the emergence of "Anomalous" trophic regimes, were observed compared to the DR09 description. These dissimilarities with the DR09 study were related to interannual variability in the sub-basin forcing: winter deep convection events, frontal instabilities, inflow of Atlantic or Black Sea Waters and river run-off. The large assortment of phytoplankton phenologies identified in the Mediterranean Sea is thus verified at interannual level, confirming the "sentinel" role of this basin to detect the impact of climate changes on the pelagic environment.


2021 ◽  
Vol 18 (3) ◽  
pp. 937-960
Author(s):  
Caroline Ulses ◽  
Claude Estournel ◽  
Marine Fourrier ◽  
Laurent Coppola ◽  
Fayçal Kessouri ◽  
...  

Abstract. The north-western Mediterranean deep convection plays a crucial role in the general circulation and biogeochemical cycles of the Mediterranean Sea. The DEWEX (DEnse Water EXperiment) project aimed to better understand this role through an intensive observation platform combined with a modelling framework. We developed a three-dimensional coupled physical and biogeochemical model to estimate the cycling and budget of dissolved oxygen in the entire north-western Mediterranean deep-convection area over the period September 2012 to September 2013. After showing that the simulated dissolved oxygen concentrations are in a good agreement with the in situ data collected from research cruises and Argo floats, we analyse the seasonal cycle of the air–sea oxygen exchanges, as well as physical and biogeochemical oxygen fluxes, and we estimate an annual oxygen budget. Our study indicates that the annual air-to-sea fluxes in the deep-convection area amounted to 20 molm-2yr-1. A total of 88 % of the annual uptake of atmospheric oxygen, i.e. 18 mol m−2, occurred during the intense vertical mixing period. The model shows that an amount of 27 mol m−2 of oxygen, injected at the sea surface and produced through photosynthesis, was transferred under the euphotic layer, mainly during deep convection. An amount of 20 mol m−2 of oxygen was then gradually exported in the aphotic layers to the south and west of the western basin, notably, through the spreading of dense waters recently formed. The decline in the deep-convection intensity in this region predicted by the end of the century in recent projections may have important consequences on the overall uptake of atmospheric oxygen in the Mediterranean Sea and on the oxygen exchanges with the Atlantic Ocean, which appear necessary to better quantify in the context of the expansion of low-oxygen zones.


2021 ◽  
Author(s):  
Romain Escudier ◽  
Emanuela Clementi ◽  
Mohamed Omar ◽  
Andrea Cipollone ◽  
Jenny Pistoia ◽  
...  

<p>In order to be able to predict the future ocean climate and weather, it is crucial to understand what happened in the past and the mechanisms responsible for the ocean variability. This is particularly true in a complex area such as the Mediterranean Sea with diverse dynamics such as deep convection and thermohaline circulation or coastal hydrodynamics. To this end, effective tools are reanalyses or reconstructions of the past ocean state. </p><p>Here we present a new physical reanalysis of the Mediterranean Sea at high resolution, developed in the Copernicus Marine Environment Monitoring Service (CMEMS) framework. The hydrodynamic model is based on the Nucleus for European Modelling of the Ocean (NEMO) combined with a variational data assimilation scheme (OceanVar).</p><p>The model has a horizontal resolution of 1/24<strong>°</strong> and 141 vertical z* levels and provides daily and monthly 3D values of temperature, salinity, sea level and currents. Hourly ECMWF ERA-5 atmospheric fields force the model and daily boundary conditions in the Atlantic are taken from the global CMCC C-GLORS reanalysis. 39 rivers model the freshwater input to the basin plus the Dardanelles. The reanalysis covers 33-years, initialized from SeaDataNet climatology in January 1985, getting to a nominal state after a two-years spin-up and ending in 2019. In-situ data from CTD, ARGO floats and XBT are assimilated into the model in combination with satellite altimetry data.</p><p>This reanalysis has been validated and assessed through comparison to in-situ and satellite observations as well as literature climatologies. The results show an overall improvement of the skill and a better representation of the main dynamics of the region compared to the previous, lower resolution (1/16<strong>°</strong>) reanalysis. Temperature and salinity RMSE is decreased by respectively 12% and 20%. The deeper biases in salinity of the previous version are corrected and the new reanalysis present a better representation of the deep convection in the Gulf of Lion. Climate signals show continuous increase of the temperature due to climate change but also in salinity.</p><p>The new reanalysis will allow the study of physical processes at multi-scales, from the large scale to the transient small mesoscale structures.</p>


Ocean Science ◽  
2009 ◽  
Vol 5 (4) ◽  
pp. 461-473 ◽  
Author(s):  
P. Oddo ◽  
M. Adani ◽  
N. Pinardi ◽  
C. Fratianni ◽  
M. Tonani ◽  
...  

Abstract. A new numerical general circulation ocean model for the Mediterranean Sea has been implemented nested within an Atlantic general circulation model within the framework of the Marine Environment and Security for the European Area project (MERSEA, Desaubies, 2006). A 4-year twin experiment was carried out from January 2004 to December 2007 with two different models to evaluate the impact on the Mediterranean Sea circulation of open lateral boundary conditions in the Atlantic Ocean. One model considers a closed lateral boundary in a large Atlantic box and the other is nested in the same box in a global ocean circulation model. Impact was observed comparing the two simulations with independent observations: ARGO for temperature and salinity profiles and tide gauges and along-track satellite observations for the sea surface height. The improvement in the nested Atlantic-Mediterranean model with respect to the closed one is particularly evident in the salinity characteristics of the Modified Atlantic Water and in the Mediterranean sea level seasonal variability.


2014 ◽  
Vol 27 (1) ◽  
pp. 442-447 ◽  
Author(s):  
N. Pinardi ◽  
A. Bonaduce ◽  
A. Navarra ◽  
S. Dobricic ◽  
P. Oddo

Abstract A formalism to obtain a mean sea level equation (MSLE) is constructed for any limited ocean region and/or the global ocean by considering the mass conservation equation with compressible effects and a linear equation of state. The MSLE contains buoyancy fluxes terms representing the steric effects and the mass flux is represented by surface water fluxes and volume transport terms. The MSLE is studied for the Mediterranean Sea case using a simulation experiment for the decade 1999–2008. It is found that the Mediterranean MSL tendency is made of a steric contribution that is almost periodic in time superimposed on a stochastic-like signal due to the mass balance, dominating the MSL tendency. The MSL tendency stochastic-like term is a result of the imbalance between the volume flux at Gibraltar and the area average surface water flux.


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